CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53896	Soybean	nucleus	93.01	90.75
KRH43554	Soybean	nucleus	73.54	74.16
KRH59572	Soybean	nucleus	73.04	73.17
VIT_04s0044g01290.t01	Wine grape	nucleus	68.39	65.97
PGSC0003DMT400073788	Potato	nucleus	61.9	60.59
Solyc11g006000.1.1	Tomato	nucleus	61.23	59.93
AT1G53570.1	Thale cress	cytosol	58.9	58.13
CDX89612	Canola	nucleus	55.41	57.51
Bra013139.1-P	Field mustard	nucleus	56.24	57.09
CDX93120	Canola	nucleus	56.24	57.0
Os11t0207200-01	Rice	cytosol, plasma membrane	48.59	52.71
GSMUA_Achr6P25760_001	Banana	cytosol	44.93	50.56
HORVU4Hr1G017100.3	Barley	cytosol, mitochondrion, nucleus	53.41	48.34
TraesCS4B01G104900.1	Wheat	cytosol, mitochondrion, nucleus	53.08	48.11
TraesCS4A01G211600.1	Wheat	cytosol	52.91	48.04
TraesCS4D01G101800.3	Wheat	cytosol, mitochondrion, nucleus	52.91	47.96
KXG28265	Sorghum	mitochondrion	52.58	47.31
Zm00001d049080_P001	Maize	mitochondrion	52.08	46.23
OQU85116	Sorghum	cytosol	40.43	43.94
GSMUA_Achr9P08460_001	Banana	cytosol, plasma membrane, plastid	38.1	43.05
GSMUA_Achr6P17610_001	Banana	nucleus	51.91	41.54
Os04t0437600-01	Rice	plasma membrane	47.75	40.54
TraesCS2B01G323700.2	Wheat	mitochondrion	46.09	40.2
TraesCS2D01G305500.1	Wheat	mitochondrion	45.76	39.91
TraesCS2A01G307100.1	Wheat	mitochondrion	45.42	39.74
OQU81618	Sorghum	mitochondrion	46.76	38.02
Zm00001d025449_P002	Maize	mitochondrion, plastid	45.42	36.84
HORVU2Hr1G076510.2	Barley	cytosol	45.76	36.52
KRH28449	Soybean	plastid	15.97	36.23
Zm00001d016807_P001	Maize	mitochondrion	43.43	35.8
Os02t0555900-00	Rice	plasma membrane	41.93	35.15
KRH10459	Soybean	cytosol	24.96	34.09
KRH26278	Soybean	cytosol	17.97	32.83
KRH06039	Soybean	cytosol	17.8	31.85
KRH57939	Soybean	nucleus	17.97	31.67
KRH04602	Soybean	nucleus	17.8	31.38
KRH28506	Soybean	plastid	32.28	31.14
KRH74789	Soybean	nucleus	16.97	31.1
KRH27916	Soybean	cytosol, plastid	43.26	30.81
KRH35266	Soybean	nucleus	45.42	30.78
KRH38416	Soybean	cytosol, plastid	45.76	30.66
KRH42244	Soybean	cytosol	23.96	30.64
KRH77009	Soybean	nucleus	17.64	30.64
KRH05734	Soybean	cytosol, plastid	28.95	30.63
KRG91565	Soybean	cytosol	45.09	30.52
KRH08892	Soybean	cytosol	45.59	30.51
KRH77558	Soybean	cytosol, plastid	44.09	30.49
KRH58364	Soybean	cytosol, plastid	25.29	30.4
KRH25356	Soybean	cytosol	17.8	30.4
KRH76953	Soybean	plastid	31.78	30.17
KRH04666	Soybean	plastid	31.78	29.98
KRH57740	Soybean	plastid	31.45	29.81
KRH28462	Soybean	plastid	17.14	29.77
KRH00952	Soybean	cytosol	14.31	29.66
KRH66431	Soybean	plastid	17.14	29.6
KRH55299	Soybean	mitochondrion	11.98	29.15
KRH66433	Soybean	cytosol, plastid	16.64	28.9
KRH55302	Soybean	plasma membrane, plastid	13.98	28.47
KRH55037	Soybean	plasma membrane	14.14	28.33
KRH53173	Soybean	nucleus	26.12	28.29
KRH56159	Soybean	cytosol, mitochondrion, plastid	17.97	28.05
KRH51939	Soybean	mitochondrion, plastid	31.28	28.02
KRH64744	Soybean	nucleus	26.29	27.92
KRH61238	Soybean	cytosol, plastid	29.95	27.48
KRH22583	Soybean	plastid	18.14	27.39
KRH26765	Soybean	mitochondrion	17.8	27.02
KRH16614	Soybean	mitochondrion	24.46	26.58
KRH16616	Soybean	nucleus	25.62	26.1
KRH10458	Soybean	cytosol	20.47	26.06
KRH15298	Soybean	cytosol	30.12	25.78
KRH18819	Soybean	nucleus	25.29	25.59
KRH68552	Soybean	cytosol	27.79	25.23
KRH41200	Soybean	cytosol	43.26	25.05
KRG96833	Soybean	cytosol	27.29	24.92
KRH36483	Soybean	cytosol, mitochondrion, plasma membrane, plastid	17.47	24.88
KRG98260	Soybean	mitochondrion	15.97	24.81
KRH35566	Soybean	nucleus	25.46	24.52
KRH30249	Soybean	mitochondrion	16.47	24.09
KRG91247	Soybean	nucleus	24.79	23.76
KRH72707	Soybean	mitochondrion	16.64	21.46
KRH17058	Soybean	cytosol, golgi, mitochondrion, nucleus, plastid	16.31	20.12
KRH24194	Soybean	cytosol	22.63	9.86
KRH29165	Soybean	cytosol	22.8	9.84

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100780263	MapMan:18.4.2.2	EMBL:ACUP02002737	EnsemblPlantsGene:GLYMA_04G213000	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0006950	GO:GO:0007049	GO:GO:0007154	GO:GO:0007165	GO:GO:0007346	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014
GO:GO:0031098	GO:GO:0032147	UniProt:I1JY21	InterPro:IPR000719	EnsemblPlants:KRH64042	ProteinID:KRH64042
ProteinID:KRH64042.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF337	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	UniParc:UPI0002339801
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:48461074..48466899

Molecular Weight (calculated)

65850.8 Da

IEP (calculated)

9.188

GRAVY (calculated)

-0.526

Length

601 amino acids

Sequence
(BLAST)

001: MPTWWGKKSS KTKDQQHQQQ QDHPHGAAAT TTLLHFNFIK PKPSKSFDDV VRNSPRASRD FGSSAAVDQG LPLPRPSVFS TQSFAIDQGL VFGSASVSGS
101: SVSSSGSYDD HPQINASRGQ GDMKFLVRSK SPGPGSRGPT SPTSPLHPKL LGLSLDSPTG RQEGECHPLP LPPGSPTSPS SSLPSMRANG MTEHTTSNLS
201: KWKKGKLLGR GTFGHVYLGF NSDSGQLSAI KEVRVVCDDQ SSKECLKQLN QEIHLLSQLS HPNIVQYYGS DLGEETLSVY LEYVSGGSIH KLLQEYGAFK
301: EPVIQNYTRQ IVSGLSYLHG RNTVHRDIKG ANILVDPNGE IKLADFGMAK HINSSSSMLS FKGSPYWMAP EVVMNTNGYS LPVDIWSLGC TILEMATSKP
401: PWNQYEGVAA IFKIGNSRDM PEIPDHLSSE AKKFIQLCLQ RDPSARPTAQ MLLEHPFIRD QSLTKATNVR ITRDAFPCMF DGSRTPPPVL DHSNRTSLTS
501: LDGDYATKPV PVTSRAERSP RDNTRMITSL PVSPCSSPLR QYEPAHKSCF LSPPHPTYTL MGQNTLPSYP VRSNATFTLD PFQETSFYKA HTPGGSPRRL
601: I

Best Arabidopsis Sequence Match ( AT1G53570.4 )
(BLAST)

001: MPTWWGRKSC KNKDDNHRGI ISTDRDIKSS AVVVDPPLTP TRGGTPRCSR EFAGASSAFS GFDSDSTEKK GHPLPRPLLS PVSIHHQDHV SGSTSGSTSV
101: SSVSSSGSAD DQSQLVASRG RGDVKFNVAA APRSPERVSP KAATITTRPT SPRHQRLSGV VSLESSTGRN DDGRSSSECH PLPRPPTSPT SPSAVHGSRI
201: GGGYETSPSG FSTWKKGKFL GSGTFGQVYL GFNSEKGKMC AIKEVKVISD DQTSKECLKQ LNQEINLLNQ LCHPNIVQYY GSELSEETLS VYLEYVSGGS
301: IHKLLKDYGS FTEPVIQNYT RQILAGLAYL HGRNTVHRDI KGANILVDPN GEIKLADFGM AKHVTAFSTM LSFKGSPYWM APEVVMSQNG YTHAVDIWSL
401: GCTILEMATS KPPWSQFEGV AAIFKIGNSK DTPEIPDHLS NDAKNFIRLC LQRNPTVRPT ASQLLEHPFL RNTTRVASTS LPKDFPPRSY DGNFSLQPTR
501: EPYPGRLSHD NYAKQPLSRT IKSPRENVRA ITSLPVSPCS SPLRQLGPAY KSCFLSPPHP SYAFPGQDSG YNLAEFAASP FRMKKDAMME PSSFRTQTPN
601: SPLRSRLV

Arabidopsis Description

MAPKKK3Mitogen-activated protein kinase kinase kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HRJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.