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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
YLoc:cytosol
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G211600.1 Wheat cytosol 80.87 67.67
HORVU4Hr1G017100.3 Barley cytosol, mitochondrion, nucleus 81.05 67.62
TraesCS4D01G101800.3 Wheat cytosol, mitochondrion, nucleus 80.87 67.57
TraesCS4B01G104900.1 Wheat cytosol, mitochondrion, nucleus 80.87 67.57
KXG28265 Sorghum mitochondrion 81.41 67.52
Zm00001d049080_P001 Maize mitochondrion 80.51 65.88
GSMUA_Achr6P25760_001 Banana cytosol 58.66 60.86
GSMUA_Achr9P08460_001 Banana cytosol, plasma membrane, plastid 51.08 53.2
KRH64042 Soybean nucleus 52.71 48.59
KRH59572 Soybean nucleus 52.53 48.5
KRH43554 Soybean nucleus 51.99 48.32
KRH53896 Soybean nucleus 52.89 47.56
CDX89612 Canola nucleus 48.92 46.8
Bra013139.1-P Field mustard nucleus 49.46 46.28
VIT_04s0044g01290.t01 Wine grape nucleus 51.99 46.23
CDX93120 Canola nucleus 49.46 46.21
GSMUA_Achr6P17610_001 Banana nucleus 62.09 45.81
AT1G53570.1 Thale cress cytosol 50.0 45.48
PGSC0003DMT400073788 Potato nucleus 49.28 44.46
Solyc11g006000.1.1 Tomato nucleus 48.19 43.49
PGSC0003DMT400063858 Potato cytosol 32.49 43.37
Os04t0437600-01 Rice plasma membrane 51.26 40.11
Solyc04g064590.1.1 Tomato nucleus 21.66 35.93
Os02t0555900-00 Rice plasma membrane 43.32 33.47
Os04t0559800-01 Rice plasma membrane 42.24 26.17
Os01t0699500-01 Rice mitochondrion 19.68 25.77
Os02t0666300-01 Rice plasma membrane 41.34 25.62
Os01t0699100-01 Rice mitochondrion 19.31 24.88
Os01t0699600-01 Rice mitochondrion 19.13 24.54
Os01t0699400-01 Rice mitochondrion 18.05 24.27
Os03t0262200-00 Rice cytosol, plastid 25.81 23.95
Os02t0322400-00 Rice mitochondrion 19.31 23.88
Os07t0119000-01 Rice mitochondrion, plastid 31.95 23.51
Os05t0545300-01 Rice cytosol 18.41 23.18
Os03t0292700-01 Rice mitochondrion 18.41 22.97
Os03t0764300-01 Rice mitochondrion, plastid 32.13 22.91
Os08t0421800-01 Rice cytosol 28.34 22.75
Os03t0703400-01 Rice plasma membrane 26.53 22.48
Os05t0545400-01 Rice mitochondrion, plastid 16.97 22.17
Os02t0769700-01 Rice mitochondrion 8.66 21.82
Os10t0130000-00 Rice nucleus 18.77 13.85
Os04t0660500-01 Rice cytosol, plasma membrane 25.27 10.32
Os09t0383300-01 Rice nucleus 3.43 6.6
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.2.2ProteinID:BAF27827.1ProteinID:BAT13136.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006464GO:GO:0006468GO:GO:0006950
GO:GO:0007049GO:GO:0007154GO:GO:0007165GO:GO:0007346GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0023014
GO:GO:0031098GO:GO:0032147InterPro:IPR000719InterPro:Kinase-like_dom_sfEnsemblPlantsGene:Os11g0207200EnsemblPlants:Os11t0207200-01
PFAM:PF00069PIRSF:PIRSF000615ScanProsite:PS00107PFscan:PS50011PANTHER:PTHR24361PANTHER:PTHR24361:SF427
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q0ITY8SMART:SM00220SUPFAM:SSF56112UniParc:UPI0000DD9B78
SEG:seg:::::
Description
MAPK kinase kinase alphaSimilar to MAP3Ka. (Os11t0207200-01)
Coordinates
chr11:+:5460669..5464646
Molecular Weight (calculated)
60939.3 Da
IEP (calculated)
9.525
GRAVY (calculated)
-0.447
Length
554 amino acids
Sequence
(BLAST)
001: FNRVPDASYV LPGRTLAIDS RRQNLAVEEG RFFANNQGLE HPRLSETSVS PRKESYLHNL DLSNDRTAYC HGRKSTEIVF STRVPISPPG SKGQIPCPTS
101: PVQSRAFGQC PGSPTARQDD SRSSSSPHPL PRPPGSPCSS SRVVSSQWKK GKLLGSGTFG QVYQGFNSEG GQMCAIKEVK VISDDSNSKE CLRQLHQEIV
201: LLSQLSHPNI VQYYGSDLSS ETLSVYLEYV SGGSIHKLLQ EYGAFGEAVL RNYTAQILSG LAYLHGRNTV HRDIKGANIL VDPNGDIKLA DFGMAKHISA
301: HTSIKSFKGS PYWMAPEVIM NTNGYSLSVD IWSLGCTIIE MATARPPWIQ YEGVAAIFKI GNSKDIPDIP DHLSFEAKNF LKLCLQRDPA ARPTAAQLME
401: HPFVKDLVAN RSFRSGMTRD TFPTSFDGKG AMVQTSNRSL SPLRDPDLTM RNLQVPTSAI PSISTRRISA INPSNVRMNM SLPVSPCSSP LRQYRQSNRS
501: CMPSPPHPAY SAGAANYSPI NNALYPKRPS NHVPDPWLEI SQLKAPPFDS PRRL
Best Arabidopsis Sequence Match ( AT1G53570.1 )
(BLAST)
001: MPTWWGRKSC KNKDDNHRGI ISTDRDIKSS AVVVDPPLTP TRGGTPRCSR EFAGASSAFS GFDSDSTEKK GHPLPRPLLS PVSIHHQDHV SGSTSGSTSV
101: SSVSSSGSAD DQSQLVASRG RGDVKFNVAA APRSPERVSP KAATITTRPT SPRHQRLSGV VSLESSTGRN DDGRSSSECH PLPRPPTSPT SPSAVHGSRI
201: GGGYETSPSG FSTWKKGKFL GSGTFGQVYL GFNSEKGKMC AIKEVKVISD DQTSKECLKQ LNQEINLLNQ LCHPNIVQYY GSELSEETLS VYLEYVSGGS
301: IHKLLKDYGS FTEPVIQNYT RQILAGLAYL HGRNTVHRDI KGANILVDPN GEIKLADFGM AKHVTAFSTM LSFKGSPYWM APEVVMSQNG YTHAVDIWSL
401: GCTILEMATS KPPWSQFEGV AAIFKIGNSK DTPEIPDHLS NDAKNFIRLC LQRNPTVRPT ASQLLEHPFL RNTTRVASTS LPKDFPPRSY DGNFSLQPTR
501: EPYPGRLSHD NYAKQPLSRT IKSPSRENVR AITSLPVSPC SSPLRQLGPA YKSCFLSPPH PSYAFPGQDS GYNLAEFAAS PFRMKKDAMM EPSSFRTQTP
601: NSPLRSRLV
Arabidopsis Description
MAPKKK3Mitogen-activated protein kinase kinase kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HRJ4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.