Factsheet for Os04t0559800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G404700.1	Wheat	cytosol	85.57	86.05
HORVU2Hr1G096350.1	Barley	cytosol	85.35	85.83
TraesCS2B01G425500.2	Wheat	nucleus	84.9	85.38
TraesCS2A01G407600.1	Wheat	cytosol	77.96	84.28
OQU82130	Sorghum	cytosol, plastid	82.55	82.37
VIT_02s0025g03850.t01	Wine grape	plastid	21.36	78.28
Zm00001d002688_P001	Maize	nucleus, plastid	59.84	76.65
Os02t0666300-01	Rice	plasma membrane	73.6	73.6
GSMUA_Achr5P19460_001	Banana	nucleus	62.86	61.02
VIT_16s0050g00770.t01	Wine grape	cytosol	60.51	60.65
VIT_02s0025g03370.t01	Wine grape	cytosol	59.96	59.49
PGSC0003DMT400040869	Potato	cytosol	58.28	58.54
Solyc03g025360.2.1	Tomato	cytosol	58.17	58.43
KRH38416	Soybean	cytosol, plastid	58.39	58.19
KRH08892	Soybean	cytosol	58.28	58.02
KRH35266	Soybean	nucleus	57.16	57.61
KRG91565	Soybean	cytosol	57.05	57.43
Solyc06g036080.2.1	Tomato	cytosol	56.26	55.09
AT1G63700.1	Thale cress	nucleus	54.03	54.7
Solyc08g081210.2.1	Tomato	nucleus, plastid	51.23	54.52
PGSC0003DMT400031805	Potato	cytosol	53.24	54.46
KRH27916	Soybean	cytosol, plastid	50.45	53.44
CDY45350	Canola	nucleus	51.9	53.33
CDY08319	Canola	nucleus	51.9	53.33
KRH77558	Soybean	cytosol, plastid	51.57	53.05
Bra027792.1-P	Field mustard	nucleus	51.9	52.85
KRH41200	Soybean	cytosol	50.67	43.64
Os11t0207200-01	Rice	cytosol, plasma membrane	26.17	42.24
Os04t0437600-01	Rice	plasma membrane	30.76	38.84
Os02t0555900-00	Rice	plasma membrane	28.52	35.56
Os03t0764300-01	Rice	mitochondrion, plastid	26.62	30.63
Os07t0119000-01	Rice	mitochondrion, plastid	25.28	30.01
Os03t0262200-00	Rice	cytosol, plastid	18.12	27.14
Os03t0703400-01	Rice	plasma membrane	19.57	26.76
Os01t0699100-01	Rice	mitochondrion	12.75	26.51
Os01t0699400-01	Rice	mitochondrion	12.08	26.21
Os02t0769700-01	Rice	mitochondrion	6.38	25.91
Os01t0699500-01	Rice	mitochondrion	12.08	25.53
Os01t0699600-01	Rice	mitochondrion	12.19	25.23
Os03t0292700-01	Rice	mitochondrion	12.53	25.23
Os08t0421800-01	Rice	cytosol	19.13	24.78
Os02t0322400-00	Rice	mitochondrion	11.97	23.88
Os05t0545300-01	Rice	cytosol	11.74	23.86
Os05t0545400-01	Rice	mitochondrion, plastid	11.19	23.58
Os10t0130000-00	Rice	nucleus	13.09	15.58
Os04t0660500-01	Rice	cytosol, plasma membrane	17.45	11.5
Os09t0383300-01	Rice	nucleus	2.35	7.29

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.2	EntrezGene:4336647	ProteinID:BAF15456.1	ProteinID:BAS90464.1	ProteinID:CAD41079.2
ProteinID:EEE61482.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007049	GO:GO:0007154	GO:GO:0007165
GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0023014	GO:GO:0031098	GO:GO:0032147	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EnsemblPlantsGene:Os04g0559800	EnsemblPlants:Os04t0559800-01	PFAM:PF00069	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF618	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q7XUR1	SMART:SM00220	SUPFAM:SSF56112
UniParc:UPI000021C763	RefSeq:XP_015635465.1	SEG:seg	:	:	:

Description

YODA 1, OsYODA-2, YODA-2Similar to YDA. (Os04t0559800-01)

Coordinates

chr4:-:28049246..28056867

Molecular Weight (calculated)

97312.1 Da

IEP (calculated)

10.103

GRAVY (calculated)

-0.635

Length

894 amino acids

Sequence
(BLAST)

001: MPPWWGKSFS KDAKKTTKEN LIDTFHRLIS PNDQKGSTKS KRSCRRGNDS SVEKSCRSTT VSRPTSPSKE VSRCQSFSAD RPHAHPLPIP GVRPPVTRTV
101: SDITESKPIL EKRGKPPLLL PLPKPNRPPR RHGNSEVVSE IVVASPSSNC SDSDDHGDSQ LQSPVGNDAE NATLVTLKNK SSNARKECPG PITAKNMKEI
201: HRPANQVHGS HILSTSPRGV AADSYQSNLQ NPRPLVLDSA PNSLMSSPSR SPRRICPDHI PTSAFWAVKP HTDVTFVGSG QCSSPGSGQT SGHNSVGGDM
301: LAQLFWQPSR SSPECSPIPS PRMTSPGPSS RVHSGSVSPL HPRSGGMAPE SPTNRHDDGK KKQTHKLPLP PLSISHSSFH PNNSTPTSPI SVPRSPGRTE
401: NPPSPGSRWK KGKLIGRGTF GHVYVGFNSD SGEMCAMKEV TLFLDDPKSK ESAKQLGQEI SLLSRLQHPN IVQYYGSETV DDKLYIYLEY VSGGSIHKLL
501: QEYGQLGEQA IRSYTQQILS GLAYLHAKNT VHRDIKGANI LVDPSGRVKL ADFGMAKHIN GQQCPFSFKG SPYWMAPEVI KNSNGCNLAV DIWSLGCTVL
601: EMATSKPPWS QYEGIAAMFK IGNSKELPPI PDHLSEPGKD FIRKCLQRDP SQRPTAMELL QHPFVQKAVS LEKSVLSEPL EHLAVISCRS SAKMAAHTRN
701: ISSLGLEGQT IYQRRGAKFS SKHSDIRIRS NISCPVSPCG SPLLKSRSPQ HSNGRMSPSP ISSPRTTSGT STPLSGGNGA IPFNHLKQST YSNEGFAIPS
801: RSPDDLFASR PTDPDLGQFI RVHQVSQGLQ ERVVSEADIL SPQFGKRLGN VFDLRDKLSP SERFTHHAFV DHVKLNPSLD LTSGSPHLGL KHGN

Best Arabidopsis Sequence Match ( AT1G63700.2 )
(BLAST)

001: MPWWSKSKDE KKKTNKESII DAFNRKLGFA SEDRSSGRSR KSRRRRDEIV SERGAISRLP SRSPSPSTRV SRCQSFAERS PAVPLPRPIV RPHVTSTDSG
101: MNGSQRPGLD ANLKPSWLPL PKPHGATSIP DNTGAEPDFA TASVSSGSSV GDIPSDSLLS PLASDCENGN RTPVNISSRD QSMHSNKNSA EMFKPVPNKN
201: RILSASPRRR PLGTHVKNLQ IPQRDLVLCS APDSLLSSPS RSPMRSFIPD QVSNHGLLIS KPYSDVSLLG SGQCSSPGSG YNSGNNSIGG DMATQLFWPQ
301: SRCSPECSPV PSPRMTSPGP SSRIQSGAVT PLHPRAGGST TGSPTRRLDD NRQQSHRLPL PPLLISNTCP FSPTYSAATS PSVPRSPARA EATVSPGSRW
401: KKGRLLGMGS FGHVYLGFNS ESGEMCAMKE VTLCSDDPKS RESAQQLGQE ISVLSRLRHQ NIVQYYGSET VDDKLYIYLE YVSGGSIYKL LQEYGQFGEN
501: AIRNYTQQIL SGLAYLHAKN TVHRDIKGAN ILVDPHGRVK VADFGMAKHI TAQSGPLSFK GSPYWMAPEV IKNSNGSNLA VDIWSLGCTV LEMATTKPPW
601: SQYEGVPAMF KIGNSKELPD IPDHLSEEGK DFVRKCLQRN PANRPTAAQL LDHAFVRNVM PMERPIVSGE PAEAMNVASS TMRSLDIGHA RSLPCLDSED
701: ATNYQQKGLK HGSGFSISQS PRNMSCPISP VGSPIFHSHS PHISGRRSPS PISSPHALSG SSTPLTGCGG AIPFHHQRQT TVNFLHEGIG SSRSPGSGGN
801: FYTNSFFQEP SRQQDRSRSS PRTPPHVFWD NNGSIQPGYN WNKDNQPVLS DHVSQQLLSE HLKLKSLDLR PGFSTPGSTN RGP

Arabidopsis Description

YDAYDA [Source:UniProtKB/TrEMBL;Acc:A0A178WLG6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.