CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 3
cytosol 3
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27916	Soybean	cytosol, plastid	91.14	93.84
VIT_02s0025g03850.t01	Wine grape	plastid	22.21	79.1
VIT_02s0025g03370.t01	Wine grape	cytosol	66.97	64.59
KRH41200	Soybean	cytosol	69.85	58.48
KRH08892	Soybean	cytosol	60.3	58.35
AT1G63700.1	Thale cress	nucleus	59.26	58.32
CDY45350	Canola	nucleus	58.23	58.16
CDY08319	Canola	nucleus	58.11	58.05
KRH38416	Soybean	cytosol, plastid	59.72	57.86
Bra027792.1-P	Field mustard	nucleus	58.23	57.63
KRH35266	Soybean	nucleus	58.69	57.5
TraesCS6B01G279300.1	Wheat	cytosol	51.78	57.25
KRG91565	Soybean	cytosol	58.23	56.98
Solyc08g081210.2.1	Tomato	nucleus, plastid	55.01	56.9
PGSC0003DMT400031805	Potato	cytosol	57.19	56.87
TraesCS2A01G407600.1	Wheat	cytosol	51.9	54.53
GSMUA_Achr4P25300_001	Banana	cytosol	54.89	53.96
Zm00001d017525_P002	Maize	cytosol	54.2	52.74
EES05759	Sorghum	cytosol	54.09	52.51
HORVU6Hr1G064150.1	Barley	cytosol	52.93	52.39
TraesCS6D01G227300.1	Wheat	cytosol	52.93	52.39
TraesCS6A01G245000.3	Wheat	cytosol	52.82	52.28
TraesCS2D01G404700.1	Wheat	cytosol	53.39	52.19
HORVU2Hr1G096350.1	Barley	cytosol	53.05	51.86
TraesCS2B01G425500.2	Wheat	nucleus	52.93	51.74
Os04t0559800-01	Rice	plasma membrane	53.05	51.57
Os02t0666300-01	Rice	plasma membrane	52.82	51.34
GSMUA_Achr5P19460_001	Banana	nucleus	54.09	51.03
Zm00001d002688_P001	Maize	nucleus, plastid	40.74	50.72
OQU82130	Sorghum	cytosol, plastid	51.55	50.0
Zm00001d051404_P003	Maize	nucleus	51.55	49.56
KRH64042	Soybean	nucleus	30.49	44.09
KRH43554	Soybean	nucleus	29.34	42.79
KRH53896	Soybean	nucleus	30.03	42.37
KRH59572	Soybean	nucleus	29.11	42.17
KRH10459	Soybean	cytosol	18.99	37.5
KRH26278	Soybean	cytosol	13.35	35.26
KRH42244	Soybean	cytosol	18.99	35.11
KRH04666	Soybean	plastid	25.43	34.69
KRH57740	Soybean	plastid	25.2	34.54
KRH05734	Soybean	cytosol, plastid	22.55	34.51
KRH28506	Soybean	plastid	24.63	34.35
KRH28449	Soybean	plastid	10.36	33.96
KRH76953	Soybean	plastid	24.51	33.65
KRH06039	Soybean	cytosol	12.89	33.33
KRH58364	Soybean	cytosol, plastid	19.1	33.2
KRH51939	Soybean	mitochondrion, plastid	25.2	32.64
KRH61238	Soybean	cytosol, plastid	24.51	32.52
KRH53173	Soybean	nucleus	20.37	31.89
KRH64744	Soybean	nucleus	20.6	31.63
KRH15298	Soybean	cytosol	25.43	31.48
KRH74789	Soybean	nucleus	11.74	31.1
KRH16614	Soybean	mitochondrion	19.68	30.92
KRH16616	Soybean	nucleus	20.71	30.51
KRH25356	Soybean	cytosol	12.2	30.11
KRH77009	Soybean	nucleus	11.97	30.06
KRH18819	Soybean	nucleus	20.48	29.97
KRH55299	Soybean	mitochondrion	8.52	29.96
KRH57939	Soybean	nucleus	11.62	29.62
KRH66431	Soybean	plastid	11.85	29.6
KRH28462	Soybean	plastid	11.74	29.48
KRH10458	Soybean	cytosol	15.77	29.03
KRH04602	Soybean	nucleus	11.28	28.74
KRH00952	Soybean	cytosol	9.55	28.62
KRH55037	Soybean	plasma membrane	9.78	28.33
KRH55302	Soybean	plasma membrane, plastid	9.55	28.14
KRH56159	Soybean	cytosol, mitochondrion, plastid	12.31	27.79
KRH66433	Soybean	cytosol, plastid	10.82	27.17
KRH26765	Soybean	mitochondrion	12.31	27.02
KRH22583	Soybean	plastid	12.31	26.88
KRG98260	Soybean	mitochondrion	11.74	26.36
KRH36483	Soybean	cytosol, mitochondrion, plasma membrane, plastid	12.31	25.36
KRG96833	Soybean	cytosol	19.1	25.23
KRH68552	Soybean	cytosol	19.22	25.23
KRH35566	Soybean	nucleus	17.84	24.84
KRH30249	Soybean	mitochondrion	11.74	24.82
KRG91247	Soybean	nucleus	17.61	24.4
KRH72707	Soybean	mitochondrion	11.51	21.46
KRH17058	Soybean	cytosol, golgi, mitochondrion, nucleus, plastid	11.39	20.33
KRH24194	Soybean	cytosol	15.65	9.86
KRH29165	Soybean	cytosol	15.77	9.84

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100777350	MapMan:18.4.2.2	EMBL:ACUP02000680	EnsemblPlantsGene:GLYMA_01G220700	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0006950	GO:GO:0007049	GO:GO:0007154	GO:GO:0007165	GO:GO:0007346	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014
GO:GO:0031098	GO:GO:0032147	InterPro:IPR000719	UniProt:K7K581	ProteinID:KRH77557.1	EnsemblPlants:KRH77558
ProteinID:KRH77558	ProteinID:KRH77558.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	PFscan:PS50011
PANTHER:PTHR24361	PANTHER:PTHR24361:SF458	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
UniParc:UPI000294FDFE	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:54977496..54985447

Molecular Weight (calculated)

93717.6 Da

IEP (calculated)

9.542

GRAVY (calculated)

-0.488

Length

869 amino acids

Sequence
(BLAST)

001: MSSWWKKSSS KDVKRKEKRK SIIDTIQRKL NRSRGSRRHH SHTISEKGTT FLVPTTSPSP STHVSRLQSF AERPLAQPLP LPGTHRLSTN RANSGTSVTS
101: KPESTRGSKS SLYFPLPKPG CVFNGGEPTD AEEDIGTASI SSGSSIDSDD QCDSHFLSPL ASDSENGNRA TVHSTVSGVH KDQPPITIPK NSRVSSKPAP
201: QLCNHQILSN TPKGASLHMP NPQIACSGGL WSAPDSSMSS PSRSPLRTFG SEQVLNSGFC TGKPYPDLAS GHCSSPGSGH NSVGGDLTVQ IFCPQNRCSP
301: ECSPIPSPGM KSPGFSSRIH SSAVSPLHPC AGSATLESPT RRPDDVKQQT HRLPLPPITI PNYCPFSPTY SATTTPSAPR SPSIAENLTS PGSRWKKGQL
401: LGRGTFGHVY LGFNSESGEM CAMKEVTLFS DDAKSRESAQ QLGQEIALLS HLRHPNIVQY YGSETVDDKL YIYLEYVSGG SIYKLLQQYG QLSEIVIRNY
501: TRQILLGLAY LHAKNTVHRD IKAANILVDP NGRVKLADFG MAKHISGQSC PLSFKGSPYW MAPEVIKNSN GCNLAVDIWS LGSTVFEMAT TKPPWSQYEG
601: VAAMFKIGNS KDLPAMPDHL SEDGKDFIRQ CLQRNPVHRP SAAQLLLHPF VKKATLGRPI LSADPSEAKP DFVNAMRSLA IGPAKHNLAL VSEAAGTYLS
701: RSSRTGSGSS EAHTPRNISC PVSPPAGSPL LPPRLLHVTG RLSPSPISSP HTASGSSTPL TGGIGAVPFH LTKQPIFSHE GINVIQRPQN ALNSNGSTAY
801: QEPNCDPLWR ILKSTFACPD IVSSNNDALG NHNRRVGQGL PREFYDGKSY LADGVSQQLL NDHVRKFHS

Best Arabidopsis Sequence Match ( AT1G53570.4 )
(BLAST)

001: MPTWWGRKSC KNKDDNHRGI ISTDRDIKSS AVVVDPPLTP TRGGTPRCSR EFAGASSAFS GFDSDSTEKK GHPLPRPLLS PVSIHHQDHV SGSTSGSTSV
101: SSVSSSGSAD DQSQLVASRG RGDVKFNVAA APRSPERVSP KAATITTRPT SPRHQRLSGV VSLESSTGRN DDGRSSSECH PLPRPPTSPT SPSAVHGSRI
201: GGGYETSPSG FSTWKKGKFL GSGTFGQVYL GFNSEKGKMC AIKEVKVISD DQTSKECLKQ LNQEINLLNQ LCHPNIVQYY GSELSEETLS VYLEYVSGGS
301: IHKLLKDYGS FTEPVIQNYT RQILAGLAYL HGRNTVHRDI KGANILVDPN GEIKLADFGM AKHVTAFSTM LSFKGSPYWM APEVVMSQNG YTHAVDIWSL
401: GCTILEMATS KPPWSQFEGV AAIFKIGNSK DTPEIPDHLS NDAKNFIRLC LQRNPTVRPT ASQLLEHPFL RNTTRVASTS LPKDFPPRSY DGNFSLQPTR
501: EPYPGRLSHD NYAKQPLSRT IKSPRENVRA ITSLPVSPCS SPLRQLGPAY KSCFLSPPHP SYAFPGQDSG YNLAEFAASP FRMKKDAMME PSSFRTQTPN
601: SPLRSRLV

Arabidopsis Description

MAPKKK3Mitogen-activated protein kinase kinase kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HRJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.