CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50310.1	KRG89812	AT2G41090.1	17360592
AT3G50310.1	KRG94975	AT2G41090.1	17360592
AT3G50310.1	KRH18664	AT2G41090.1	17360592
AT3G50310.1	KRH31638	AT4G14640.1	17360592
AT3G50310.1	KRH69070	AT4G14640.1	17360592
AT3G50310.1	KRG89812	AT5G21274.1	17360592
AT3G50310.1	KRG94975	AT5G21274.1	17360592
AT3G50310.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77009	Soybean	nucleus	99.7	94.51
KRH28462	Soybean	plastid	92.07	87.28
KRH66431	Soybean	plastid	90.85	85.63
KRH28449	Soybean	plastid	51.83	64.15
KRH04602	Soybean	nucleus	64.63	62.17
KRH57939	Soybean	nucleus	62.8	60.41
KRH66433	Soybean	cytosol, plastid	56.1	53.18
AT4G36950.1	Thale cress	plastid	52.44	51.19
CDX83120	Canola	cytosol	52.44	50.74
Bra030001.1-P	Field mustard	cytosol	52.44	50.74
CDY12801	Canola	cytosol	53.05	50.29
CDY01441	Canola	cytosol	52.74	50.0
Bra012131.1-P	Field mustard	cytosol	52.74	50.0
CDY30595	Canola	cytosol	51.83	49.71
Bra036070.1-P	Field mustard	cytosol	51.83	49.71
CDY17760	Canola	cytosol	51.22	49.12
AT3G50310.1	Thale cress	cytosol	51.22	49.12
AT5G67080.1	Thale cress	cytosol	51.22	48.84
VIT_07s0031g00530.t01	Wine grape	mitochondrion	52.44	46.61
PGSC0003DMT400010342	Potato	cytosol, plastid	50.91	46.39
CDX69280	Canola	plastid	49.7	46.18
CDX75628	Canola	plastid	49.7	46.05
Bra011739.1-P	Field mustard	plastid	49.7	46.05
Solyc02g090970.1.1	Tomato	cytosol, nucleus, plasma membrane, plastid	49.09	44.72
Solyc02g090980.1.1	Tomato	cytosol	47.87	44.23
PGSC0003DMT400065492	Potato	nucleus	47.87	44.1
PGSC0003DMT400010341	Potato	cytosol	47.87	44.1
PGSC0003DMT400010340	Potato	nucleus	47.87	43.61
Solyc02g064980.1.1	Tomato	cytosol	47.26	43.18
Solyc02g090990.1.1	Tomato	cytosol	46.34	42.7
GSMUA_Achr9P21940_001	Banana	cytosol, mitochondrion, peroxisome, plastid	48.48	40.05
KRH55037	Soybean	plasma membrane	34.15	37.33
KRH55302	Soybean	plasma membrane, plastid	33.23	36.95
KRH55299	Soybean	mitochondrion	27.74	36.84
KRH00952	Soybean	cytosol	32.32	36.55
KRH25356	Soybean	cytosol	37.8	35.23
KRH26278	Soybean	cytosol	35.06	34.95
KRH06039	Soybean	cytosol	35.67	34.82
GSMUA_Achr4P13370_001	Banana	cytosol	49.39	34.25
KRH56159	Soybean	cytosol, mitochondrion, plastid	37.8	32.21
KRH22583	Soybean	plastid	36.89	30.4
KRH36483	Soybean	cytosol, mitochondrion, plasma membrane, plastid	39.02	30.33
KRH26765	Soybean	mitochondrion	36.28	30.05
KRG98260	Soybean	mitochondrion	35.37	29.97
KRH30249	Soybean	mitochondrion	34.76	27.74
KRH72707	Soybean	mitochondrion	35.37	24.89
KRH10459	Soybean	cytosol	31.4	23.41
KRH17058	Soybean	cytosol, golgi, mitochondrion, nucleus, plastid	34.76	23.41
KRH42244	Soybean	cytosol	29.88	20.85
KRH58364	Soybean	cytosol, plastid	30.49	20.0
KRH16614	Soybean	mitochondrion	30.49	18.08
KRH53173	Soybean	nucleus	29.57	17.48
KRH10458	Soybean	cytosol	25.0	17.37
KRH16616	Soybean	nucleus	31.1	17.29
KRH64042	Soybean	nucleus	31.1	16.97
KRH64744	Soybean	nucleus	29.27	16.96
KRH05734	Soybean	cytosol, plastid	29.27	16.9
KRH43554	Soybean	nucleus	30.49	16.78
KRH18819	Soybean	nucleus	30.18	16.67
KRH59572	Soybean	nucleus	30.18	16.5
KRH53896	Soybean	nucleus	30.49	16.23
KRG91247	Soybean	nucleus	30.79	16.11
KRH35566	Soybean	nucleus	30.18	15.87
KRG96833	Soybean	cytosol	31.1	15.5
KRH68552	Soybean	cytosol	31.1	15.41
KRH28506	Soybean	plastid	28.66	15.09
KRH76953	Soybean	plastid	28.66	14.85
KRH04666	Soybean	plastid	28.05	14.44
KRH57740	Soybean	plastid	27.74	14.35
KRH61238	Soybean	cytosol, plastid	28.66	14.35
KRH51939	Soybean	mitochondrion, plastid	29.27	14.31
KRH15298	Soybean	cytosol	30.18	14.1
KRH27916	Soybean	cytosol, plastid	31.4	12.2
KRH35266	Soybean	nucleus	32.93	12.18
KRG91565	Soybean	cytosol	32.62	12.05
KRH08892	Soybean	cytosol	32.62	11.92
KRH38416	Soybean	cytosol, plastid	32.32	11.82
KRH77558	Soybean	cytosol, plastid	31.1	11.74
KRH41200	Soybean	cytosol	31.71	10.02
KRH24194	Soybean	cytosol	28.96	6.88
KRH29165	Soybean	cytosol	28.96	6.82

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.2	EMBL:ACUP02000070	EnsemblPlantsGene:GLYMA_01G043100	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950
GO:GO:0007049	GO:GO:0007154	GO:GO:0007165	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014	GO:GO:0031098
GO:GO:0032147	UniProt:I1J5L5	InterPro:IPR000719	EnsemblPlants:KRH74789	ProteinID:KRH74789	ProteinID:KRH74789.1
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF334	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000296E243	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:4693924..4694964

Molecular Weight (calculated)

36635.2 Da

IEP (calculated)

5.584

GRAVY (calculated)

-0.384

Length

328 amino acids

Sequence
(BLAST)

001: MIWVRGDSLG TGSFATVNIA IPTNTSIHFP SPTAVKSSDV HSSSMLKNEK EILDCLGASP YNIFLEYAAG GSLADQVKRH GGRLPESYVR RCTRSIVEGL
101: KHIHDNGYVH CDVKLQNILV FENGDVKIAD FGLAKEKGEK QGTFECRGTP LFMSPESVND NEYESPADIW ALGCAVVEML TGKPAWDVRG SNIWSLLIRI
201: GVGEELPKIP EELSEEGKDF LLKCFVKDPM KRWSAEMLLH HPFVNNETVS FHKVNEPLPL PSPSPRTHFD LTHWASTVTT WLPSSPDSDE WRMAEFGSSC
301: SPENRFRRLL TDQTPANWSE SDGWTSVR

Best Arabidopsis Sequence Match ( AT3G50310.1 )
(BLAST)

001: MEWVRGETIG FGTFSTVSTA TKSRNSGDFP ALIAVKSTDA YGAASLSNEK SVLDSLGDCP EIIRCYGEDS TVENGEEMHN LLLEYASRGS LASYMKKLGG
101: EGLPESTVRR HTGSVLRGLR HIHAKGFAHC DIKLANILLF NDGSVKIADF GLAMRVDGDL TALRKSVEIR GTPLYMAPEC VNDNEYGSAA DVWALGCAVV
201: EMFSGKTAWS VKEGSHFMSL LIRIGVGDEL PKIPEMLSEE GKDFLSKCFV KDPAKRWTAE MLLNHSFVTI DLEDDHRENF VVKVKDEDKV LMSPKCPFEF
301: DDWDSFTLDS NPSFDSPVER LGSLVSGSIP DWSVGGSWLT VR

Arabidopsis Description

MAPKKK20MKKK20 [Source:UniProtKB/TrEMBL;Acc:A0A178VGW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.