Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G50310.1 | CDX73678 | AT3G51920.1 | 17360592 |
| AT3G50310.1 | CDX95314 | AT3G51920.1 | 17360592 |
| AT3G50310.1 | CDY23174 | AT3G51920.1 | 17360592 |
| AT3G50310.1 | CDY06478 | AT4G14640.1 | 17360592 |
| AT3G50310.1 | CDX92401 | AT5G21274.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30595 | Canola | cytosol | 95.03 | 95.03 |
| CDX83120 | Canola | cytosol | 80.41 | 81.12 |
| AT3G50310.1 | Thale cress | cytosol | 72.81 | 72.81 |
| CDY12801 | Canola | cytosol | 71.05 | 70.23 |
| CDY01441 | Canola | cytosol | 70.76 | 69.94 |
| CDX75628 | Canola | plastid | 57.31 | 55.37 |
| CDX69280 | Canola | plastid | 56.14 | 54.39 |
| KRH28462 | Soybean | plastid | 52.63 | 52.02 |
| KRH28449 | Soybean | plastid | 40.06 | 51.7 |
| KRH66431 | Soybean | plastid | 52.34 | 51.44 |
| KRH74789 | Soybean | nucleus | 49.12 | 51.22 |
| KRH77009 | Soybean | nucleus | 51.75 | 51.16 |
| PGSC0003DMT400065492 | Potato | nucleus | 51.17 | 49.16 |
| KRH04602 | Soybean | nucleus | 48.54 | 48.68 |
| Solyc02g064980.1.1 | Tomato | cytosol | 50.29 | 47.91 |
| KRH57939 | Soybean | nucleus | 47.66 | 47.8 |
| PGSC0003DMT400010341 | Potato | cytosol | 47.95 | 46.07 |
| VIT_07s0031g00530.t01 | Wine grape | mitochondrion | 49.42 | 45.8 |
| PGSC0003DMT400010340 | Potato | nucleus | 47.66 | 45.28 |
| Solyc02g090970.1.1 | Tomato | cytosol, nucleus, plasma membrane, plastid | 47.66 | 45.28 |
| Solyc02g090980.1.1 | Tomato | cytosol | 46.78 | 45.07 |
| PGSC0003DMT400010342 | Potato | cytosol, plastid | 47.37 | 45.0 |
| Solyc02g090990.1.1 | Tomato | cytosol | 46.49 | 44.66 |
| KRH66433 | Soybean | cytosol, plastid | 42.11 | 41.62 |
| GSMUA_Achr9P21940_001 | Banana | cytosol, mitochondrion, peroxisome, plastid | 43.57 | 37.53 |
| CDY18020 | Canola | cytosol | 8.48 | 37.18 |
| CDY53387 | Canola | cytosol, plasma membrane, plastid | 35.09 | 35.61 |
| CDY18290 | Canola | nucleus, plasma membrane, plastid | 34.5 | 35.01 |
| GSMUA_Achr4P13370_001 | Banana | cytosol | 47.66 | 34.46 |
| CDY19144 | Canola | mitochondrion | 34.8 | 33.33 |
| CDY52049 | Canola | mitochondrion | 34.5 | 33.24 |
| CDY12200 | Canola | mitochondrion | 34.5 | 32.33 |
| CDX97370 | Canola | plastid | 36.55 | 31.02 |
| CDY42094 | Canola | cytosol | 33.92 | 30.85 |
| CDY39740 | Canola | cytosol | 17.54 | 30.3 |
| CDY66991 | Canola | cytosol | 25.15 | 29.55 |
| CDY08107 | Canola | mitochondrion | 28.07 | 29.27 |
| CDY07592 | Canola | mitochondrion | 28.36 | 29.22 |
| CDY17301 | Canola | cytosol | 36.55 | 29.0 |
| CDY05900 | Canola | mitochondrion | 28.36 | 28.87 |
| CDX89295 | Canola | plastid | 37.43 | 27.95 |
| CDX86063 | Canola | nucleus | 30.12 | 27.39 |
| CDY20266 | Canola | cytosol | 12.57 | 27.39 |
| CDY36607 | Canola | cytosol | 26.32 | 27.36 |
| CDY19916 | Canola | cytosol | 35.38 | 27.13 |
| CDX68367 | Canola | nucleus | 31.58 | 26.87 |
| CDY10252 | Canola | plastid | 35.67 | 26.81 |
| CDY20789 | Canola | cytosol | 35.09 | 26.49 |
| CDY24072 | Canola | cytosol | 27.49 | 26.4 |
| CDX97857 | Canola | cytosol, plasma membrane, plastid | 35.09 | 26.32 |
| CDY36728 | Canola | cytosol | 35.09 | 26.2 |
| CDY29258 | Canola | cytosol | 28.07 | 25.95 |
| CDY14295 | Canola | plastid | 35.67 | 25.9 |
| CDX80352 | Canola | plastid | 34.5 | 25.88 |
| CDY69540 | Canola | cytosol | 33.33 | 25.28 |
| CDX84864 | Canola | plastid | 34.5 | 25.16 |
| CDY06612 | Canola | cytosol | 35.09 | 24.9 |
| CDY02024 | Canola | cytosol, plastid | 35.09 | 24.19 |
| CDY10704 | Canola | cytosol, plastid | 35.09 | 24.1 |
| CDY52115 | Canola | plastid | 34.21 | 23.88 |
| CDX99124 | Canola | nucleus | 24.85 | 22.49 |
| CDY24036 | Canola | cytosol | 35.09 | 21.35 |
| CDY49844 | Canola | nucleus | 25.44 | 20.91 |
| CDY52152 | Canola | cytosol | 11.7 | 19.14 |
| CDY69517 | Canola | cytosol | 28.07 | 17.49 |
| CDY34000 | Canola | cytosol | 28.07 | 17.45 |
| CDY36198 | Canola | cytosol | 28.07 | 16.7 |
| CDX75154 | Canola | cytosol | 28.36 | 16.03 |
| CDX95018 | Canola | cytosol | 29.53 | 15.54 |
| CDX93524 | Canola | nucleus | 29.24 | 15.38 |
| CDY27717 | Canola | cytosol | 28.66 | 15.08 |
| CDX89612 | Canola | nucleus | 25.44 | 15.03 |
| CDY05223 | Canola | cytosol | 28.66 | 14.83 |
| CDX93120 | Canola | nucleus | 25.44 | 14.67 |
| CDY01459 | Canola | cytosol | 28.36 | 14.12 |
| CDY12781 | Canola | cytosol | 28.66 | 14.06 |
| CDY08319 | Canola | nucleus | 28.66 | 11.26 |
| CDY45350 | Canola | nucleus | 28.66 | 11.26 |
| CDY43937 | Canola | cytosol | 5.26 | 9.28 |
| CDY18021 | Canola | nucleus | 11.11 | 9.27 |
| CDY07086 | Canola | cytosol | 26.02 | 7.97 |
| CDY24178 | Canola | cytosol | 26.02 | 7.75 |
| CDX74018 | Canola | cytosol | 26.61 | 7.01 |
| CDY07961 | Canola | cytosol | 26.61 | 6.99 |
| CDX75717 | Canola | cytosol | 27.49 | 6.95 |
| CDX82534 | Canola | cytosol | 27.19 | 6.89 |
| CDY23615 | Canola | cytosol | 1.17 | 3.03 |
| CDY59256 | Canola | extracellular | 1.17 | 2.2 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.2.2 | GO:A0A078FT97 | UniProt:A0A078FT97 | EnsemblPlants:CDY17760 | ProteinID:CDY17760 |
| ProteinID:CDY17760.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00002004001 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PIRSF:PIRSF000615 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR24361 | PANTHER:PTHR24361:SF334 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | UniParc:UPI0004EC576C | SEG:seg | : | : | : |
Description
BnaC08g21680DBnaC08g21680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FT97]
Coordinates
chrLK032077:-:385747..386775
Molecular Weight (calculated)
37737.2 Da
IEP (calculated)
4.414
GRAVY (calculated)
-0.360
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWFRGETIG YGTFSTVSLA TPSNIKGSGE YPSLMAVKSS NSYGGIANEK SVLDSLGDCP EIVRCFGEDQ TVEKGEKLHN LLLEYASRGS LASQLKKLNG
101: EGLPETTVRR HTGTVLRGLR HIHSSGFAHC DIKLENILLF GDGAVKIADF GLARDLTASK EGGEIRGTPL YMAPESVNDN EYGAAADVWA LGCAVVEMFS
201: GETAWTVEEG SHFMSFLLRI GVGEELPRVP EELSGEGKDF LSKCFVKDPE KRWTAEMLLN HPFVAVDCED DDYDQRDELF LKGKDEVSKS PRCPFGFPDW
301: ESTSSESEIQ YQPLDSPVER LASLVSERVP DWSVSEDWVT VR
101: EGLPETTVRR HTGTVLRGLR HIHSSGFAHC DIKLENILLF GDGAVKIADF GLARDLTASK EGGEIRGTPL YMAPESVNDN EYGAAADVWA LGCAVVEMFS
201: GETAWTVEEG SHFMSFLLRI GVGEELPRVP EELSGEGKDF LSKCFVKDPE KRWTAEMLLN HPFVAVDCED DDYDQRDELF LKGKDEVSKS PRCPFGFPDW
301: ESTSSESEIQ YQPLDSPVER LASLVSERVP DWSVSEDWVT VR
001: MEWIRGETIG YGTFSTVSLA TRSNNDSGEF PPLMAVKSAD SYGAASLANE KSVLDNLGDD CNEIVRCFGE DRTVENGEEM HNLFLEYASR GSLESYLKKL
101: AGEGVPESTV RRHTGSVLRG LRHIHANGFA HCDLKLGNIL LFGDGAVKIA DFGLAKRIGD LTALNYGVQI RGTPLYMAPE SVNDNEYGSE GDVWALGCVV
201: VEMFSGKTAW SLKEGSNFMS LLLRIGVGDE VPMIPEELSE QGRDFLSKCF VKDPKKRWTA EMLLNHPFVT VDVDHDVLVK EEDFVVNMKT EDVSTSPRCP
301: FEFPDWVSVS SGSQTIDSPD ERVASLVTDM IPDWSVTNSW VTVR
101: AGEGVPESTV RRHTGSVLRG LRHIHANGFA HCDLKLGNIL LFGDGAVKIA DFGLAKRIGD LTALNYGVQI RGTPLYMAPE SVNDNEYGSE GDVWALGCVV
201: VEMFSGKTAW SLKEGSNFMS LLLRIGVGDE VPMIPEELSE QGRDFLSKCF VKDPKKRWTA EMLLNHPFVT VDVDHDVLVK EEDFVVNMKT EDVSTSPRCP
301: FEFPDWVSVS SGSQTIDSPD ERVASLVTDM IPDWSVTNSW VTVR
Arabidopsis Description
MAPKKK19Mitogen-activated protein kinase kinase kinase 19 [Source:UniProtKB/TrEMBL;Acc:Q9FHA5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.