Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36607 | Canola | cytosol | 67.95 | 16.11 |
| VIT_12s0142g00700.t01 | Wine grape | cytosol | 51.28 | 15.15 |
| CDY24072 | Canola | cytosol | 67.95 | 14.89 |
| PGSC0003DMT400067237 | Potato | cytosol | 52.56 | 14.09 |
| VIT_12s0034g00750.t01 | Wine grape | cytosol | 46.15 | 11.5 |
| CDY34000 | Canola | cytosol | 78.21 | 11.09 |
| CDY69517 | Canola | cytosol | 76.92 | 10.93 |
| VIT_12s0034g00240.t01 | Wine grape | nucleus | 52.56 | 9.72 |
| CDY36198 | Canola | cytosol | 70.51 | 9.57 |
| OQU91136 | Sorghum | cytosol | 44.87 | 9.43 |
| CDX75154 | Canola | cytosol | 69.23 | 8.93 |
| TraesCS6A01G327500.1 | Wheat | mitochondrion | 47.44 | 8.85 |
| CDX83120 | Canola | cytosol | 38.46 | 8.85 |
| AT4G08500.1 | Thale cress | cytosol, mitochondrion | 66.67 | 8.55 |
| CDY17760 | Canola | cytosol | 37.18 | 8.48 |
| CDY01441 | Canola | cytosol | 37.18 | 8.38 |
| CDY12801 | Canola | cytosol | 37.18 | 8.38 |
| CDY30595 | Canola | cytosol | 35.9 | 8.19 |
| KRH16614 | Soybean | mitochondrion | 57.69 | 8.14 |
| CDY53387 | Canola | cytosol, plasma membrane, plastid | 34.62 | 8.01 |
| KRH64744 | Soybean | nucleus | 57.69 | 7.95 |
| KRH53173 | Soybean | nucleus | 56.41 | 7.93 |
| AT4G08470.1 | Thale cress | cytosol | 56.41 | 7.86 |
| KRH18819 | Soybean | nucleus | 58.97 | 7.74 |
| CDY18290 | Canola | nucleus, plasma membrane, plastid | 33.33 | 7.72 |
| KRH16616 | Soybean | nucleus | 57.69 | 7.63 |
| TraesCS4D01G217000.1 | Wheat | plastid | 56.41 | 7.43 |
| CDX69280 | Canola | plastid | 33.33 | 7.37 |
| TraesCS4A01G087700.1 | Wheat | cytosol, plastid | 56.41 | 7.35 |
| CDX75628 | Canola | plastid | 33.33 | 7.34 |
| CDY52049 | Canola | mitochondrion | 33.33 | 7.32 |
| CDY19144 | Canola | mitochondrion | 33.33 | 7.28 |
| TraesCS4B01G216700.1 | Wheat | cytosol, plastid | 55.13 | 7.28 |
| GSMUA_Achr10P... | Banana | cytosol | 48.72 | 7.24 |
| Zm00001d052147_P001 | Maize | cytosol | 48.72 | 7.24 |
| HORVU6Hr1G079810.1 | Barley | mitochondrion | 48.72 | 7.2 |
| GSMUA_Achr11P... | Banana | cytosol | 50.0 | 7.16 |
| OQU85800 | Sorghum | mitochondrion | 47.44 | 7.13 |
| CDY12200 | Canola | mitochondrion | 33.33 | 7.12 |
| TraesCS6B01G358800.1 | Wheat | cytosol | 47.44 | 7.07 |
| TraesCS6D01G307100.1 | Wheat | cytosol | 47.44 | 7.07 |
| GSMUA_Achr2P07690_001 | Banana | nucleus | 52.56 | 7.07 |
| GSMUA_Achr7P11850_001 | Banana | mitochondrion, nucleus | 50.0 | 7.04 |
| Os03t0262200-00 | Rice | cytosol, plastid | 53.85 | 7.04 |
| EER92515 | Sorghum | cytosol, plastid | 53.85 | 6.95 |
| GSMUA_Achr1P12210_001 | Banana | mitochondrion | 51.28 | 6.92 |
| CDY42094 | Canola | cytosol | 33.33 | 6.91 |
| Solyc07g053170.2.1 | Tomato | cytosol | 52.56 | 6.82 |
| GSMUA_Achr10P... | Banana | cytosol | 48.72 | 6.73 |
| CDY66991 | Canola | cytosol | 24.36 | 6.53 |
| Zm00001d028514_P002 | Maize | plastid | 53.85 | 6.43 |
| AT4G08480.1 | Thale cress | cytosol, plastid | 62.82 | 6.34 |
| KXG20217 | Sorghum | cytosol | 52.56 | 6.28 |
| CDY05900 | Canola | mitochondrion | 26.92 | 6.25 |
| CDY29258 | Canola | cytosol | 29.49 | 6.22 |
| CDX97370 | Canola | plastid | 32.05 | 6.2 |
| CDX84864 | Canola | plastid | 37.18 | 6.18 |
| CDY10252 | Canola | plastid | 35.9 | 6.15 |
| CDX80352 | Canola | plastid | 35.9 | 6.14 |
| CDX97857 | Canola | cytosol, plasma membrane, plastid | 35.9 | 6.14 |
| CDY08107 | Canola | mitochondrion | 25.64 | 6.1 |
| HORVU4Hr1G061550.1 | Barley | cytosol, plastid | 53.85 | 6.08 |
| CDY07592 | Canola | mitochondrion | 25.64 | 6.02 |
| TraesCS4D01G038900.1 | Wheat | plastid | 47.44 | 5.76 |
| Zm00001d033655_P003 | Maize | nucleus, plastid | 44.87 | 5.76 |
| Zm00001d013477_P008 | Maize | plastid | 44.87 | 5.71 |
| CDY36728 | Canola | cytosol | 33.33 | 5.68 |
| CDY02024 | Canola | cytosol, plastid | 35.9 | 5.65 |
| CDY10704 | Canola | cytosol, plastid | 35.9 | 5.62 |
| TraesCS4A01G272500.1 | Wheat | plastid | 47.44 | 5.61 |
| HORVU4Hr1G006660.1 | Barley | plastid | 47.44 | 5.59 |
| CDY17301 | Canola | cytosol | 30.77 | 5.57 |
| TraesCS4B01G041600.1 | Wheat | plastid | 47.44 | 5.56 |
| CDY52115 | Canola | plastid | 34.62 | 5.51 |
| CDY19916 | Canola | cytosol | 30.77 | 5.38 |
| Os03t0703400-01 | Rice | plasma membrane | 44.87 | 5.35 |
| CDY69540 | Canola | cytosol | 30.77 | 5.32 |
| CDY14295 | Canola | plastid | 32.05 | 5.31 |
| CDY20789 | Canola | cytosol | 30.77 | 5.3 |
| CDX89295 | Canola | plastid | 30.77 | 5.24 |
| CDX68367 | Canola | nucleus | 26.92 | 5.22 |
| Zm00001d047875_P003 | Maize | plastid | 42.31 | 5.13 |
| CDY49844 | Canola | nucleus | 26.92 | 5.05 |
| CDX89612 | Canola | nucleus | 37.18 | 5.01 |
| CDY06612 | Canola | cytosol | 30.77 | 4.98 |
| CDX93120 | Canola | nucleus | 37.18 | 4.89 |
| CDX93524 | Canola | nucleus | 39.74 | 4.77 |
| CDX95018 | Canola | cytosol | 39.74 | 4.77 |
| CDY24036 | Canola | cytosol | 33.33 | 4.63 |
| CDY27717 | Canola | cytosol | 38.46 | 4.62 |
| CDY05223 | Canola | cytosol | 38.46 | 4.54 |
| CDX86063 | Canola | nucleus | 20.51 | 4.26 |
| CDY39740 | Canola | cytosol | 10.26 | 4.04 |
| CDY08319 | Canola | nucleus | 38.46 | 3.45 |
| CDY45350 | Canola | nucleus | 38.46 | 3.45 |
| CDY52152 | Canola | cytosol | 8.97 | 3.35 |
| CDY01459 | Canola | cytosol | 28.21 | 3.2 |
| CDY12781 | Canola | cytosol | 28.21 | 3.16 |
| CDY18021 | Canola | nucleus | 14.1 | 2.68 |
| CDY07086 | Canola | cytosol | 35.9 | 2.51 |
| CDY24178 | Canola | cytosol | 35.9 | 2.44 |
| CDX74018 | Canola | cytosol | 35.9 | 2.16 |
| CDY07961 | Canola | cytosol | 35.9 | 2.15 |
| CDX99124 | Canola | nucleus | 10.26 | 2.12 |
| CDX82534 | Canola | cytosol | 35.9 | 2.07 |
| CDX75717 | Canola | cytosol | 35.9 | 2.07 |
| CDY23615 | Canola | cytosol | 1.28 | 0.76 |
| CDY59256 | Canola | extracellular | 1.28 | 0.55 |
| CDY20266 | Canola | cytosol | 0.0 | 0.0 |
| CDY43937 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:50.2.7 | GO:A0A078FU50 | UniProt:A0A078FU50 | EnsemblPlants:CDY18020 | ProteinID:CDY18020 |
| ProteinID:CDY18020.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00002412001 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00069 | PFscan:PS50011 | PANTHER:PTHR24361 | PANTHER:PTHR24361:SF627 | InterPro:Prot_kinase_dom | SUPFAM:SSF56112 |
| UniParc:UPI0004EE5533 | : | : | : | : | : |
Description
BnaC03g30920DBnaC03g30920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FU50]
Coordinates
chrLK032080:-:591812..592471
Molecular Weight (calculated)
8677.4 Da
IEP (calculated)
8.239
GRAVY (calculated)
-0.403
Length
78 amino acids
Sequence
(BLAST)
(BLAST)
1: MLTRKVPYCD LKNPNQALLR IGKGELPDTL SLEARDFIVQ CLKVNPEERP TAAELLNHPF VTRHLSFSGS GSAQARES
001: MDRILARMKK STGRRGGDKN ITPVRRLERR DAARNINYDA ASCSSSSAED LSVSTSSLMT RSLEFPEPTS FRIGGGVGEM DRIYRSLGVS GPDDLAISFD
101: AWEACKKRSS SDVVNRFKSF DLDKVRDQDL SEEGPSGVVV GSDSMNHKVQ GQDLSEAGPS GGIVTELSEI GNLITPVDRL VADGVVENRR VMERTPTIVK
201: SKGYLVPNNV VAVGVGVGGG IKGLRPPVLK PPPAMKRPPI DHRGSSWDFL THFAPSETVK RPSSSSSSSE DGCDEEEGKE EEAEAEEMGA RFIQLGDTAD
301: ETCSFTTNEG DSSSTVSNTS PIYPDGGAII TSWQKGQLLG RGSFGSVYEG ISGDGDFFAV KEVSLLDQGS QAQECIQQLE GEIKLLSQLQ HQNIVRYRGT
401: AKDGSNLYIF LELVTQGSLL KLYQRYQLRD SVVSLYTRQI LDGLKYLHDK GFIHRDIKCA NILVDANGAV KLADFGLAKV SKFNDIKSCK GTPFWMAPEV
501: INRKDSDGYG SPADIWSLGC TVLEMCTGQI PYSDLEPVQA LFRIGRGTLP EVPDTLSLDA RLFILKCLKV NPEERPTAAE LLNHPFVRRP LPSVGSGGSG
601: SASPLLRR
101: AWEACKKRSS SDVVNRFKSF DLDKVRDQDL SEEGPSGVVV GSDSMNHKVQ GQDLSEAGPS GGIVTELSEI GNLITPVDRL VADGVVENRR VMERTPTIVK
201: SKGYLVPNNV VAVGVGVGGG IKGLRPPVLK PPPAMKRPPI DHRGSSWDFL THFAPSETVK RPSSSSSSSE DGCDEEEGKE EEAEAEEMGA RFIQLGDTAD
301: ETCSFTTNEG DSSSTVSNTS PIYPDGGAII TSWQKGQLLG RGSFGSVYEG ISGDGDFFAV KEVSLLDQGS QAQECIQQLE GEIKLLSQLQ HQNIVRYRGT
401: AKDGSNLYIF LELVTQGSLL KLYQRYQLRD SVVSLYTRQI LDGLKYLHDK GFIHRDIKCA NILVDANGAV KLADFGLAKV SKFNDIKSCK GTPFWMAPEV
501: INRKDSDGYG SPADIWSLGC TVLEMCTGQI PYSDLEPVQA LFRIGRGTLP EVPDTLSLDA RLFILKCLKV NPEERPTAAE LLNHPFVRRP LPSVGSGGSG
601: SASPLLRR
Arabidopsis Description
MEKK1Mitogen-activated protein kinase kinase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39008]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.