Factsheet for Zm00001d013477_P008

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005622_P001
Zm00001d009619_P002
Zm00001d011496_P002
Zm00001d020136_P001
Zm00001d020137_P001
Zm00001d032265_P001
Zm00001d036244_P001
Zm00001d044010_P001
Zm00001d045283_P001
Zm00001d047349_P001
Zm00001d050247_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G08480.1	Zm00001d047349_P001	AT4G01370.1	22643122
AT4G08500.1	Zm00001d005622_P001	AT4G23810.1	17587183
AT4G08500.1	Zm00001d009619_P002	AT4G23810.1	17587183
AT4G08500.1	Zm00001d011496_P002	AT4G23810.1	17587183
AT4G08500.1	Zm00001d020136_P001	AT4G23810.1	17587183
AT4G08500.1	Zm00001d020137_P001	AT4G23810.1	17587183
AT4G08500.1	Zm00001d032265_P001	AT4G23810.1	17587183
AT4G08500.1	Zm00001d036244_P001	AT4G23810.1	17587183
AT4G08500.1	Zm00001d044010_P001	AT4G23810.1	17587183
AT4G08500.1	Zm00001d045283_P001	AT4G23810.1	17587183
AT4G08500.1	Zm00001d050247_P001	AT4G23810.1	17587183

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91136	Sorghum	cytosol	58.56	96.77
Zm00001d033655_P003	Maize	nucleus, plastid	89.56	90.3
Os03t0703400-01	Rice	plasma membrane	83.36	78.13
TraesCS4A01G272500.1	Wheat	plastid	79.28	73.64
TraesCS4D01G038900.1	Wheat	plastid	77.0	73.52
HORVU4Hr1G006660.1	Barley	plastid	78.96	73.11
TraesCS4B01G041600.1	Wheat	plastid	78.63	72.37
GSMUA_Achr10P...	Banana	cytosol	55.63	64.95
GSMUA_Achr11P...	Banana	cytosol	57.59	64.77
PGSC0003DMT400067237	Potato	cytosol	30.18	63.57
GSMUA_Achr1P12210_001	Banana	mitochondrion	57.75	61.25
Bra039693.1-P	Field mustard	cytosol	26.92	60.22
GSMUA_Achr7P11850_001	Banana	mitochondrion, nucleus	54.16	59.93
GSMUA_Achr2P07690_001	Banana	nucleus	56.44	59.66
VIT_12s0142g00700.t01	Wine grape	cytosol	24.8	57.58
CDY36607	Canola	cytosol	29.53	55.02
CDY24072	Canola	cytosol	31.32	53.93
KRH10459	Soybean	cytosol	38.66	53.86
KRH53173	Soybean	nucleus	45.35	50.09
Zm00001d028514_P002	Maize	plastid	53.34	50.08
KRH64744	Soybean	nucleus	46.0	49.82
VIT_12s0034g00750.t01	Wine grape	cytosol	25.29	49.52
KRH16616	Soybean	nucleus	47.15	48.98
VIT_18s0001g03960.t01	Wine grape	mitochondrion, nucleus	45.19	48.85
KRH16614	Soybean	mitochondrion	43.72	48.46
Zm00001d047875_P003	Maize	plastid	50.57	48.21
KRH18819	Soybean	nucleus	46.66	48.15
VIT_12s0034g00240.t01	Wine grape	nucleus	32.63	47.39
KRH42244	Soybean	cytosol	35.89	46.81
KRH58364	Soybean	cytosol, plastid	37.36	45.8
Bra000647.1-P	Field mustard	cytosol	40.13	45.47
CDY34000	Canola	cytosol	40.29	44.91
CDY18020	Canola	cytosol	5.71	44.87
CDY69517	Canola	cytosol	40.13	44.81
Solyc07g053170.2.1	Tomato	cytosol	43.23	44.09
CDY36198	Canola	cytosol	41.27	44.0
Zm00001d052147_P001	Maize	cytosol	37.19	43.43
CDX75154	Canola	cytosol	41.76	42.31
AT4G08500.1	Thale cress	cytosol, mitochondrion	41.92	42.27
Bra037860.1-P	Field mustard	cytosol	41.27	42.24
Solyc01g104530.2.1	Tomato	nucleus	44.37	40.9
PGSC0003DMT400061014	Potato	mitochondrion	44.37	40.84
KRH10458	Soybean	cytosol	29.2	37.92
AT4G08470.1	Thale cress	cytosol	30.67	33.57
AT4G08480.1	Thale cress	cytosol, plastid	39.8	31.57
CDY18021	Canola	nucleus	20.88	31.22
Zm00001d043738_P001	Maize	mitochondrion	15.17	24.8
Zm00001d028754_P001	Maize	cytosol, mitochondrion, plastid	15.33	23.04
Zm00001d049080_P001	Maize	mitochondrion	25.29	22.9
Zm00001d043742_P001	Maize	mitochondrion	15.17	21.99
Zm00001d016807_P001	Maize	mitochondrion	25.94	21.81
Zm00001d011654_P001	Maize	mitochondrion	15.82	21.27
Zm00001d002688_P001	Maize	nucleus, plastid	24.14	21.2
Zm00001d025449_P002	Maize	mitochondrion, plastid	24.8	20.51
Zm00001d013206_P003	Maize	plastid	24.63	20.3
Zm00001d034152_P002	Maize	plastid	24.8	20.13
Zm00001d043741_P001	Maize	mitochondrion	15.5	20.0
Zm00001d011655_P001	Maize	plastid	15.5	19.83
Zm00001d038884_P001	Maize	mitochondrion	15.33	19.46
Zm00001d047728_P001	Maize	nucleus	15.5	19.11
Zm00001d007965_P002	Maize	mitochondrion	23.16	18.93
Zm00001d017525_P002	Maize	cytosol	27.41	18.81
Zm00001d005696_P001	Maize	cytosol	20.39	18.55
Zm00001d020355_P002	Maize	cytosol	20.55	18.29
Zm00001d011656_P001	Maize	mitochondrion	13.87	18.01
Zm00001d038883_P001	Maize	mitochondrion	13.54	17.7
Zm00001d043740_P001	Maize	mitochondrion	13.87	17.56
Zm00001d051404_P003	Maize	nucleus	25.12	17.04
Zm00001d050329_P003	Maize	nucleus	19.9	17.02
Zm00001d001978_P012	Maize	cytosol	18.76	8.54
Zm00001d026511_P057	Maize	cytosol	18.6	8.32

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.2	Gene3D:3.30.200.20	UniProt:A0A1D6GJU4	ProteinID:AQK63630.1	ProteinID:AQK63638.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF404	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000844977D	EnsemblPlantsGene:Zm00001d013477
EnsemblPlants:Zm00001d013477_P008	EnsemblPlants:Zm00001d013477_T008	SEG:seg	:	:	:

Description

Mitogen-activated protein kinase kinase kinase 1

Coordinates

chr5:+:12477270..12482863

Molecular Weight (calculated)

65784.3 Da

IEP (calculated)

5.149

GRAVY (calculated)

-0.374

Length

613 amino acids

Sequence
(BLAST)

001: MFSWNRKQSS SSGSPSPSSS RGGGGSGSGS GSRGRSPRLD RRNAVKRVDY EAGAGASVSV AASWSSSSSA DQQRSPGPGL QPSRSLDVAP GADLRISGSV
101: EGEVDELCRS LGLSGPEDFA IPVAAWEARK SRSNSDLLPR SHPDPSTPAD EPSPIARVVS APDVQPTRFV PAPIPATVAA PEESPKAAPA VAVAAPVGGL
201: PLPSPRRGGG EVGIRGARPP LLSPPPPIGA LAPPPVRRSF VDDDMTRSAW DIVQSFAPRE QGSEPGERLD TRCNSDTEEE SEAEDGVAAV EGELKELRIG
301: ETFEGLTGTS SLSTTNDDDA SSTTTEAMFI ISPNGKFKRK IKSWMRGALL GSGSFGMVYE GISDEGAFFA VKEVSLLDQG SNAQQSIVAL EQEIALLGQF
401: EHENIVQYYG TDKEESKLYI FIELVTQGSL SSLYQKYKLR ESQVSAYTRQ ILNGLVYLHE RNVVHRDIKC ANILVHANGS VKLADFGLAK EMSKINMLRS
501: CKGSVYWMAP EVINPKKMYG PSADIWSLGC TVLEMLTRQI PFPNIEWTNA FFMIGRGEQP TIPCYLSKEA QDFIGQCVRV DPESRPSASQ LLEHPFVNRP
601: LRASFESSSP PAI

Best Arabidopsis Sequence Match ( AT4G08470.1 )
(BLAST)

001: MDVTAIFAGD ILVQSREYLI PNDVVDVDGG IKAVRPPIIQ PPPGRKLPLI DFPGSSWDFL TYFAPSKTVK RQSSSSSDNT SDKEEVETEE TRGMFVQLGD
101: TAHEACPFAT NEADSSSTVS IISPSYASRG SIVPSWLKRK FLGRVSLGFV YEGSSGSSVG SESTCSLMTP SLEFPDRISF RKKDFSEKGP SRHVWEKRKL
201: TRAKLIENFC NPEDIEPVTS WLKGQLLGEE SFASVYEAIS DSSVGSESTC SLMTPSMEFP DRISFRKRDF SEEGPSGRVK EKRKLMRNKL IENFRKPEDI
301: TSWLKGQLLG RGSYASVYEA ISEDGDFFAV KEVSLLDKGI QAQECIQQLE GEIALLSQLQ HQNIVRYRGT AKDVSKLYIF LELVTQGSVQ KLYERYQLSY
401: TVVSLYTRQI LAGLNYLHDK GFVHRDIKCA NMLVDANGTV KLADFGLAEA SKFNDIMSCK GTLFWMAPEV INRKDSDGNG SPADIWSLGC TVLEMCTGQI
501: PYSDLKPIQA AFKIGRGTLP DVPDTLSLDA RHFILTCLKV NPEERPTAAE LLHHPFVINL

Arabidopsis Description

MAPKKK10Mitogen-activated protein kinase kinase kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0T3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.