Factsheet for Zm00001d032265_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d013477_P008
Zm00001d028514_P002
Zm00001d028948_P001
Zm00001d033655_P003
Zm00001d033980_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d047875_P003
Zm00001d052147_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23810.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT4G23810.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT4G23810.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d005003_P002	AT2G41100.1	17360592
AT4G23810.1	Zm00001d008278_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d010649_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d028948_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d038543_P004	AT2G41100.1	17360592
AT4G23810.1	Zm00001d038545_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d041430_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d043144_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d047597_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d052415_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d013477_P008	AT4G08500.1	17587183
AT4G23810.1	Zm00001d028514_P002	AT4G08500.1	17587183
AT4G23810.1	Zm00001d033655_P003	AT4G08500.1	17587183
AT4G23810.1	Zm00001d047875_P003	AT4G08500.1	17587183
AT4G23810.1	Zm00001d052147_P001	AT4G08500.1	17587183
AT4G23810.1	Zm00001d033980_P001	AT4G14640.1	17360592
AT4G23810.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT4G23810.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT4G23810.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d052415_P001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050247_P001	Maize	nucleus	83.18	86.56
OQU80381	Sorghum	nucleus	86.19	84.41
TraesCS2B01G187500.1	Wheat	nucleus	52.25	59.39
TraesCS2D01G168600.1	Wheat	nucleus	52.25	59.39
HORVU2Hr1G029430.2	Barley	mitochondrion, nucleus	42.34	57.79
TraesCS2A01G161500.1	Wheat	nucleus	50.45	56.76
Os08t0386200-01	Rice	nucleus	51.95	54.23
GSMUA_Achr3P15840_001	Banana	nucleus	29.73	39.76
Zm00001d020137_P001	Maize	nucleus	37.84	38.89
Zm00001d020136_P001	Maize	nucleus	34.83	38.41
Zm00001d005622_P001	Maize	nucleus	37.84	38.07
GSMUA_Achr3P25080_001	Banana	nucleus	33.33	33.43
VIT_15s0046g01140.t01	Wine grape	nucleus	32.13	33.13
VIT_02s0025g01280.t01	Wine grape	nucleus	32.43	31.58
CDY65042	Canola	nucleus	31.23	31.52
PGSC0003DMT400031695	Potato	nucleus	31.83	31.27
Solyc08g082110.2.1	Tomato	nucleus	31.23	30.68
KRH77637	Soybean	nucleus	29.43	30.43
AT4G23810.1	Thale cress	nucleus	29.43	30.25
Bra033158.1-P	Field mustard	nucleus	30.03	30.21
CDY25271	Canola	nucleus	30.03	30.21
VIT_16s0050g02510.t01	Wine grape	nucleus	32.73	29.95
AT4G11070.1	Thale cress	nucleus	27.93	29.71
Solyc10g009550.2.1	Tomato	nucleus	25.83	29.66
CDX94221	Canola	nucleus	27.93	28.97
PGSC0003DMT400051194	Potato	nucleus	25.23	28.97
PGSC0003DMT400014949	Potato	nucleus	31.23	28.89
KRH64503	Soybean	nucleus	31.53	28.85
KRH60029	Soybean	nucleus	31.23	28.65
CDY10969	Canola	nucleus	27.63	28.48
Bra019265.1-P	Field mustard	nucleus	27.63	28.48
KRH68901	Soybean	nucleus	30.93	28.45
KRG97154	Soybean	nucleus	30.93	28.45
Zm00001d011496_P002	Maize	nucleus	27.63	28.13
Solyc08g008280.2.1	Tomato	nucleus	30.33	28.06
KRH53440	Soybean	nucleus	30.63	28.02
CDY03518	Canola	nucleus	26.43	27.94
Bra013732.1-P	Field mustard	nucleus	26.43	27.85
CDY47621	Canola	nucleus	26.13	27.53
KRH41300	Soybean	nucleus	29.43	27.3
AT2G46400.1	Thale cress	nucleus	24.02	27.12
Zm00001d009619_P002	Maize	nucleus	23.72	26.6
PGSC0003DMT400000599	Potato	nucleus	27.33	26.3
Zm00001d044010_P001	Maize	nucleus	26.43	26.27
CDX80414	Canola	nucleus	24.62	26.2
Bra000423.1-P	Field mustard	nucleus	21.92	25.98
Bra026467.1-P	Field mustard	nucleus	24.32	25.96
CDX87141	Canola	nucleus	24.32	25.96
AT5G24110.1	Thale cress	nucleus	23.42	25.74
CDY19847	Canola	nucleus	24.02	25.64
Bra004540.1-P	Field mustard	nucleus	21.92	25.61
Solyc01g095630.2.1	Tomato	nucleus	25.83	25.6
CDX88077	Canola	nucleus	24.02	25.56
Bra009734.1-P	Field mustard	nucleus	24.02	25.56
CDX83367	Canola	nucleus	21.32	25.54
Solyc03g007380.1.1	Tomato	nucleus	27.03	25.5
CDX80015	Canola	nucleus	22.22	25.0
CDX95699	Canola	nucleus	21.32	24.91
PGSC0003DMT400023502	Potato	nucleus	26.43	24.72
KRH06499	Soybean	nucleus	27.63	24.66
KRH47935	Soybean	nucleus	27.33	24.66
CDY42043	Canola	nucleus	21.62	24.57
CDX89127	Canola	nucleus	19.82	23.83
Bra014426.1-P	Field mustard	nucleus	19.82	23.83
Zm00001d043066_P001	Maize	nucleus	17.12	23.75
Solyc05g050300.1.1	Tomato	nucleus	13.81	23.59
Zm00001d045283_P001	Maize	nucleus	27.93	23.48
Solyc05g050330.2.1	Tomato	nucleus	17.12	23.36
Zm00001d036244_P001	Maize	nucleus	25.53	23.22
Zm00001d043060_P001	Maize	nucleus	19.82	23.08
Zm00001d052357_P001	Maize	nucleus	15.02	21.93
PGSC0003DMT400046351	Potato	nucleus	19.52	21.59
Zm00001d012505_P001	Maize	nucleus	17.12	21.59
PGSC0003DMT400084227	Potato	nucleus	18.62	21.09
Zm00001d028962_P001	Maize	nucleus	13.51	21.03
PGSC0003DMT400084214	Potato	nucleus	20.42	20.54
Zm00001d010616_P001	Maize	nucleus, plastid	13.81	20.18
Zm00001d005057_P001	Maize	nucleus	20.72	19.71
Solyc05g050340.2.1	Tomato	nucleus	19.22	19.57
Zm00001d022437_P001	Maize	mitochondrion, nucleus	19.82	19.53
Zm00001d043062_P001	Maize	nucleus	19.52	19.52
Zm00001d043063_P001	Maize	nucleus	15.32	19.39
Zm00001d047523_P001	Maize	nucleus	18.62	19.08
Zm00001d012508_P001	Maize	mitochondrion	13.51	18.99
Solyc05g050310.1.1	Tomato	cytosol, nucleus	3.3	18.64
Zm00001d037854_P001	Maize	extracellular	22.82	18.58
Zm00001d010617_P001	Maize	nucleus	17.42	18.3
Zm00001d052355_P001	Maize	nucleus	19.82	17.65
Zm00001d023615_P001	Maize	plastid	20.12	17.59
Zm00001d023616_P001	Maize	plastid	20.12	17.59
Zm00001d021581_P001	Maize	cytosol, mitochondrion, nucleus	6.01	17.09
CDX80415	Canola	nucleus	7.51	16.89
Zm00001d012507_P001	Maize	nucleus	17.12	16.19

Protein Annotations

EntrezGene:100284462	MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A060D485	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EMBL:KJ726907
ProteinID:ONM04723.1	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF26	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002214BBE	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d032265	EnsemblPlants:Zm00001d032265_P001
EnsemblPlants:Zm00001d032265_T001	SEG:seg	:	:	:	:

Description

WRKY-transcription factor 25WRKY69-superfamily of TFs having WRKY and zinc finger domains

Coordinates

chr1:+:219763429..219764430

Molecular Weight (calculated)

35118.9 Da

IEP (calculated)

6.891

GRAVY (calculated)

-0.346

Length

333 amino acids

Sequence
(BLAST)

001: MADAVESRGG RARLVSDLGR VQDLVRQLEL QLRAPGDAAS VDLCRRLVHQ IVALTDSSIG MLRSSPDLAS PLPATGTGSP ISSDAASDHP FRAAASASAS
101: PKKRKATARW TSQQARVSAA GGSGAEGPVD DGYSWRKYGQ KDILGAKHPR AYYRCTHRNS QNCPATKQVQ RTDDHPALFD VVYHGEHTCR PAAAAAGGGS
201: KRAAQQHNPH AQAALQGLAA RLTVATATDA AALPPMTPES CPVRGASSPW SLASSVASDS NGCMHQDVSP CPVPGYREWT SDGDLQEVVS SAFAAVSSVA
301: PLPVLDDEFM PLECFGFDHT FDIDTAMPSL YYP

Best Arabidopsis Sequence Match ( AT4G11070.1 )
(BLAST)

001: MEMMNWERRS LLNELIHGLK AAKQLQGSSS PSLSASSSYL TTEIKENLLH NIVSSFKKAI LMLNGSTTQH NPTIELAPDP LAHPGKVPGS PASITGNPRS
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI

Arabidopsis Description

WRKY41Probable WRKY transcription factor 41 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.