Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
25464976
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 18.03 | 74.58 |
| PGSC0003DMT400084227 | Potato | nucleus | 72.95 | 60.54 |
| PGSC0003DMT400084214 | Potato | nucleus | 75.0 | 55.29 |
| Solyc05g050340.2.1 | Tomato | nucleus | 72.54 | 54.13 |
| Solyc05g050300.1.1 | Tomato | nucleus | 31.56 | 39.49 |
| Solyc10g009550.2.1 | Tomato | nucleus | 27.05 | 22.76 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 25.82 | 21.5 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 25.82 | 21.5 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 21.72 | 21.46 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 21.31 | 21.31 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 21.72 | 21.29 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 21.31 | 21.14 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 20.9 | 21.07 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 21.31 | 21.05 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 20.49 | 21.01 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 21.72 | 20.95 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 25.41 | 20.95 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 21.72 | 20.87 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 20.9 | 20.82 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 21.72 | 20.78 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 20.49 | 20.75 |
| EES18716 | Sorghum | nucleus | 22.95 | 20.59 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 21.72 | 20.38 |
| Os11t0685700-00 | Rice | nucleus | 15.98 | 20.31 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 20.9 | 20.16 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 20.08 | 20.08 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.18 | 20.0 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 21.31 | 19.92 |
| Zm00001d020136_P001 | Maize | nucleus | 24.59 | 19.87 |
| Os05t0571200-01 | Rice | nucleus | 22.54 | 19.86 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 20.08 | 19.84 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 24.59 | 19.35 |
| Solyc08g082110.2.1 | Tomato | nucleus | 26.23 | 18.88 |
| Os08t0386200-01 | Rice | nucleus | 24.59 | 18.81 |
| Solyc03g007380.1.1 | Tomato | nucleus | 27.05 | 18.7 |
| Zm00001d020137_P001 | Maize | nucleus | 24.59 | 18.52 |
| EER96589 | Sorghum | nucleus | 23.36 | 18.39 |
| Solyc03g095770.2.1 | Tomato | nucleus | 20.49 | 18.32 |
| CDX87141 | Canola | nucleus | 23.36 | 18.27 |
| Solyc09g015770.2.1 | Tomato | extracellular, nucleus | 21.72 | 18.21 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 21.72 | 18.21 |
| Solyc01g095630.2.1 | Tomato | nucleus | 25.0 | 18.15 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 24.59 | 18.07 |
| Solyc08g008280.2.1 | Tomato | nucleus | 26.64 | 18.06 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 17.21 | 18.03 |
| EER96590 | Sorghum | nucleus | 24.18 | 17.99 |
| Bra026467.1-P | Field mustard | nucleus | 22.95 | 17.95 |
| Bra009734.1-P | Field mustard | nucleus | 22.95 | 17.89 |
| CDX88077 | Canola | nucleus | 22.95 | 17.89 |
| CDX80414 | Canola | nucleus | 22.95 | 17.89 |
| Zm00001d005622_P001 | Maize | nucleus | 24.18 | 17.82 |
| AT5G24110.1 | Thale cress | nucleus | 22.13 | 17.82 |
| Zm00001d050247_P001 | Maize | nucleus | 23.36 | 17.81 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 25.0 | 17.78 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 24.18 | 17.77 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 24.59 | 17.7 |
| OQU80381 | Sorghum | nucleus | 24.59 | 17.65 |
| CDY19847 | Canola | nucleus | 22.54 | 17.63 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 24.59 | 17.6 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 22.95 | 17.34 |
| Zm00001d009619_P002 | Maize | nucleus | 20.9 | 17.17 |
| Zm00001d032265_P001 | Maize | nucleus | 23.36 | 17.12 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 21.31 | 16.88 |
| Os01t0656400-00 | Rice | nucleus | 18.85 | 16.79 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 23.36 | 16.47 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 22.95 | 16.47 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 23.36 | 16.33 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 23.36 | 16.24 |
| Zm00001d011496_P002 | Maize | nucleus | 21.72 | 16.21 |
| EES03370 | Sorghum | nucleus | 22.95 | 16.18 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 20.49 | 16.13 |
| Os09t0334500-01 | Rice | nucleus | 23.77 | 16.07 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 22.95 | 15.56 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 24.18 | 15.05 |
| Zm00001d044010_P001 | Maize | nucleus | 20.49 | 14.93 |
| CDX80415 | Canola | nucleus | 9.02 | 14.86 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 20.9 | 14.61 |
| EER87882 | Sorghum | nucleus | 22.54 | 14.55 |
| Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 14.34 | 14.4 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 21.31 | 14.02 |
| Zm00001d036244_P001 | Maize | nucleus | 20.9 | 13.93 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 20.49 | 13.59 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 20.9 | 13.53 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 13.52 | 13.25 |
| Zm00001d045283_P001 | Maize | nucleus | 21.31 | 13.13 |
| Os06t0158100-00 | Rice | nucleus | 20.9 | 13.04 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 17.62 | 12.95 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:K4C165 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF26 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:Solyc05g050330.2 | EnsemblPlants:Solyc05g050330.2.1 |
| UniParc:UPI0002767062 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | : | : | : |
Description
No Description!
Coordinates
chr5:+:60450532..60452260
Molecular Weight (calculated)
27539.8 Da
IEP (calculated)
6.283
GRAVY (calculated)
-0.576
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MGENSFWERE VVITELTKGK ELMLQLQKHF DPMKQDVCRY LAAEILSSYD KAMSLLNGTA LSGMMSKSKE IINPAPSSST APQLEFPQLL ADSSTKSCDL
101: PSKLRKRKTL APRTEYVEAR PGEEVSPKDG LNWRKYGQKL ILGAKYPREY FQCVYCHCDA TKMVQQIEKE PLSFEATYGG SHSCGQENKN QNEEVLVTVE
201: TQVGRAAGQL SECYIPEMVL TQNNSYKTKY PSDSTYDTIL QLFS
101: PSKLRKRKTL APRTEYVEAR PGEEVSPKDG LNWRKYGQKL ILGAKYPREY FQCVYCHCDA TKMVQQIEKE PLSFEATYGG SHSCGQENKN QNEEVLVTVE
201: TQVGRAAGQL SECYIPEMVL TQNNSYKTKY PSDSTYDTIL QLFS
001: MEMMNWERRS LLNELIHGLK AAKQLQGSSS PSLSASSSYL TTEIKENLLH NIVSSFKKAI LMLNGSTTQH NPTIELAPDP LAHPGKVPGS PASITGNPRS
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI
Arabidopsis Description
WRKY41Probable WRKY transcription factor 41 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.