Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020136_P001 | Maize | nucleus | 76.77 | 78.81 |
| EER96590 | Sorghum | nucleus | 49.68 | 46.95 |
| Os09t0334500-01 | Rice | nucleus | 54.19 | 46.54 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 29.68 | 36.95 |
| OQU80381 | Sorghum | nucleus | 38.71 | 35.29 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 34.52 | 33.13 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 34.19 | 31.93 |
| Bra000423.1-P | Field mustard | nucleus | 27.1 | 29.89 |
| AT2G46400.1 | Thale cress | nucleus | 28.39 | 29.83 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 34.84 | 29.67 |
| PGSC0003DMT400051194 | Potato | nucleus | 27.74 | 29.66 |
| Solyc10g009550.2.1 | Tomato | nucleus | 27.74 | 29.66 |
| PGSC0003DMT400031695 | Potato | nucleus | 32.26 | 29.5 |
| CDX95699 | Canola | nucleus | 27.1 | 29.47 |
| Bra004540.1-P | Field mustard | nucleus | 27.1 | 29.47 |
| CDX83367 | Canola | nucleus | 26.13 | 29.14 |
| Solyc08g082110.2.1 | Tomato | nucleus | 31.61 | 28.91 |
| Bra014426.1-P | Field mustard | nucleus | 25.81 | 28.88 |
| CDX89127 | Canola | nucleus | 25.81 | 28.88 |
| Bra019265.1-P | Field mustard | nucleus | 30.0 | 28.79 |
| CDX80015 | Canola | nucleus | 27.42 | 28.72 |
| KRH41300 | Soybean | nucleus | 33.23 | 28.69 |
| CDY42043 | Canola | nucleus | 27.1 | 28.67 |
| KRH77637 | Soybean | nucleus | 29.68 | 28.57 |
| CDY10969 | Canola | nucleus | 29.68 | 28.48 |
| EES18716 | Sorghum | nucleus | 24.84 | 28.31 |
| AT4G23810.1 | Thale cress | nucleus | 29.35 | 28.09 |
| CDX94221 | Canola | nucleus | 29.03 | 28.04 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 30.65 | 27.78 |
| CDY65042 | Canola | nucleus | 29.35 | 27.58 |
| KRH68901 | Soybean | nucleus | 31.94 | 27.35 |
| KRH60029 | Soybean | nucleus | 31.94 | 27.27 |
| KRH47935 | Soybean | nucleus | 32.26 | 27.1 |
| Bra033158.1-P | Field mustard | nucleus | 28.71 | 26.89 |
| CDY25271 | Canola | nucleus | 28.71 | 26.89 |
| AT4G11070.1 | Thale cress | nucleus | 27.1 | 26.84 |
| PGSC0003DMT400014949 | Potato | nucleus | 30.97 | 26.67 |
| KRH64503 | Soybean | nucleus | 31.29 | 26.65 |
| KRH53440 | Soybean | nucleus | 31.29 | 26.65 |
| KRG97154 | Soybean | nucleus | 30.97 | 26.52 |
| AT5G24110.1 | Thale cress | nucleus | 25.81 | 26.4 |
| CDY03518 | Canola | nucleus | 26.45 | 26.03 |
| KRH06499 | Soybean | nucleus | 31.29 | 26.01 |
| CDY47621 | Canola | nucleus | 26.45 | 25.95 |
| Bra013732.1-P | Field mustard | nucleus | 26.45 | 25.95 |
| Solyc08g008280.2.1 | Tomato | nucleus | 30.0 | 25.83 |
| PGSC0003DMT400000599 | Potato | nucleus | 28.71 | 25.72 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 4.84 | 25.42 |
| Bra026467.1-P | Field mustard | nucleus | 25.48 | 25.32 |
| CDX87141 | Canola | nucleus | 25.48 | 25.32 |
| Solyc01g095630.2.1 | Tomato | nucleus | 27.42 | 25.3 |
| Bra009734.1-P | Field mustard | nucleus | 25.48 | 25.24 |
| CDX80414 | Canola | nucleus | 25.48 | 25.24 |
| EES03370 | Sorghum | nucleus | 28.06 | 25.14 |
| CDY19847 | Canola | nucleus | 25.16 | 25.0 |
| PGSC0003DMT400023502 | Potato | nucleus | 28.71 | 25.0 |
| CDX88077 | Canola | nucleus | 25.16 | 24.92 |
| Solyc03g007380.1.1 | Tomato | nucleus | 28.06 | 24.65 |
| EES01669 | Sorghum | nucleus | 21.29 | 23.83 |
| Solyc05g050300.1.1 | Tomato | nucleus | 14.84 | 23.59 |
| Solyc05g050330.2.1 | Tomato | nucleus | 18.39 | 23.36 |
| EER87882 | Sorghum | nucleus | 28.06 | 23.02 |
| PGSC0003DMT400084227 | Potato | nucleus | 20.97 | 22.11 |
| PGSC0003DMT400046351 | Potato | nucleus | 21.29 | 21.93 |
| EER99917 | Sorghum | mitochondrion, nucleus | 24.19 | 21.19 |
| EES15768 | Sorghum | nucleus | 22.58 | 20.96 |
| PGSC0003DMT400084214 | Potato | nucleus | 21.94 | 20.54 |
| Solyc05g050340.2.1 | Tomato | nucleus | 21.29 | 20.18 |
| OQU78676 | Sorghum | nucleus | 14.52 | 20.0 |
| EES01666 | Sorghum | nucleus | 15.16 | 19.92 |
| OQU82729 | Sorghum | nucleus | 14.52 | 19.82 |
| OQU88981 | Sorghum | plastid | 17.1 | 19.27 |
| EES19695 | Sorghum | nucleus | 13.87 | 18.3 |
| EER94940 | Sorghum | nucleus | 13.23 | 18.22 |
| EER94905 | Sorghum | nucleus | 18.39 | 17.38 |
| EES01667 | Sorghum | nucleus | 14.52 | 17.05 |
| OQU77713 | Sorghum | nucleus | 20.65 | 16.93 |
| EES03804 | Sorghum | nucleus | 17.74 | 16.52 |
| OQU82725 | Sorghum | nucleus | 17.74 | 16.47 |
| EES09135 | Sorghum | nucleus | 18.06 | 15.51 |
| EES01668 | Sorghum | nucleus | 18.39 | 15.12 |
| CDX80415 | Canola | nucleus | 6.13 | 12.84 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:8054578 | UniProt:C5X9X7 | EnsemblPlants:EER96589 | ProteinID:EER96589 |
| ProteinID:EER96589.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF33 |
| SMART:SM00774 | EnsemblPlantsGene:SORBI_3002G174200 | SUPFAM:SSF118290 | UniParc:UPI0001A83963 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| RefSeq:XP_002460068.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:55134836..55136822
Molecular Weight (calculated)
32900.1 Da
IEP (calculated)
5.987
GRAVY (calculated)
-0.399
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASVVDGNG GSGGLVVTEL GHVKELARQL EAQLGGSSPD LCKHLASQIS SIAERSISLL ITTSSGLAGA RKRSAVPFVK GTKKRKTMDK KRHEVRVSSA
101: AGDHPADDGH SWRKYGQKDI LGAKHPRGYY RCTHRHSQGC AATKQVQRTD EDPTSFDVVY LGDHTCVQSQ WAAAAGQAAA DALAPEYNGK PGTNLTVKTE
201: GPTVEPAEQQ VQGWDAPTPF CFSSTPATAT ASWCLVPELS PPFSAPSTSN NWGVSPATSD SNHVVSFPPF EVAGDDVQFG RFEEVMSAID RADGDGFLDD
301: LDIDVSSFLV
101: AGDHPADDGH SWRKYGQKDI LGAKHPRGYY RCTHRHSQGC AATKQVQRTD EDPTSFDVVY LGDHTCVQSQ WAAAAGQAAA DALAPEYNGK PGTNLTVKTE
201: GPTVEPAEQQ VQGWDAPTPF CFSSTPATAT ASWCLVPELS PPFSAPSTSN NWGVSPATSD SNHVVSFPPF EVAGDDVQFG RFEEVMSAID RADGDGFLDD
301: LDIDVSSFLV
001: MMMEEKLVIN ELELGKELAN RLMNNLKHTS SVDSNKTLIS DILRIYQNAI FMLSFNQDKN ILKRSLEIDG KDSKNVFKKR KVSEKNTEKV KVFVATEQEN
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
Arabidopsis Description
WRKY46Probable WRKY transcription factor 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.