CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043066_P001	Maize	nucleus	87.71	86.25
Os01t0820400-01	Rice	nucleus	63.14	56.23
TraesCS3A01G343000.1	Wheat	nucleus	61.44	55.77
TraesCS3D01G337000.1	Wheat	nucleus	60.17	55.69
TraesCS3B01G375200.1	Wheat	nucleus	59.32	54.9
HORVU3Hr1G080860.1	Barley	nucleus	58.9	54.3
GSMUA_Achr7P22020_001	Banana	extracellular, nucleus	32.63	33.92
OQU78676	Sorghum	nucleus	23.73	24.89
OQU82729	Sorghum	nucleus	22.88	23.79
GSMUA_Achr8P25110_001	Banana	nucleus	20.76	22.07
EER94940	Sorghum	nucleus	19.92	20.89
EES19695	Sorghum	nucleus	18.64	18.72
EES01667	Sorghum	nucleus	20.76	18.56
OQU88981	Sorghum	plastid	20.34	17.45
EES01669	Sorghum	nucleus	20.34	17.33
EES18716	Sorghum	nucleus	19.92	17.28
GSMUA_Achr5P08580_001	Banana	nucleus	21.61	16.67
GSMUA_Achr6P25120_001	Banana	nucleus	15.68	16.67
OQU80381	Sorghum	nucleus	23.31	16.18
EES03804	Sorghum	nucleus	22.46	15.92
OQU82725	Sorghum	nucleus	22.46	15.87
EER96590	Sorghum	nucleus	22.03	15.85
EER94905	Sorghum	nucleus	21.19	15.24
EER96589	Sorghum	nucleus	19.92	15.16
EER87882	Sorghum	nucleus	23.73	14.81
EES09135	Sorghum	nucleus	22.03	14.4
EES15768	Sorghum	nucleus	20.34	14.37
EES01668	Sorghum	nucleus	22.03	13.79
EES03370	Sorghum	nucleus	19.49	13.29
EER99917	Sorghum	mitochondrion, nucleus	19.49	12.99
OQU77713	Sorghum	nucleus	19.92	12.43

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:8085396	UniProt:C5XN99	EnsemblPlants:EES01666	ProteinID:EES01666
ProteinID:EES01666.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF7
SMART:SM00774	EnsemblPlantsGene:SORBI_3003G337500	SUPFAM:SSF118290	UniParc:UPI0001A846EB	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
RefSeq:XP_002456546.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:66057329..66064893

Molecular Weight (calculated)

26642.0 Da

IEP (calculated)

6.274

GRAVY (calculated)

-0.637

Length

236 amino acids

Sequence
(BLAST)

001: MAKRDDYMDS SCGCSNGTPK RLVQDCSSYA QAHAKKKVRI STRTEYTYAP YHDGYQWRKY GQKMIRGNAY PRCYYRCTYH QDHGCPATKH VEQTNSQDPP
101: LFRVIYTNEH TCCSTHVSDY MASSIHIQQI ADASLRKVEV EIPSLTHCFD GHGLIKEEND AIISSLTAIS DYDVATSDGG HAAVQEDTPA RMSRSSNEAS
201: PSISPVLLPA SDNLKTDFIE QLEPQWFEPL DLGWFI

Best Arabidopsis Sequence Match ( AT1G66550.2 )
(BLAST)

001: MVSNIDHKAM EALLRGQGCA NNLKILLENG EISSVSTEPL IHTILDSFSL ALSFMDSPNH PPYHESSSHN MASHMSRRSS KQKLCVAEGL VNYNHDSRTM
101: CPNDGFTWRK YGQKTIKASA HKRCYYRCTY AKDQNCNATK RVQKIKDNPP VYRTTYLGKH VCKAFAVHDD TYSSTMIRFD QVVPEPIMPQ LTTIDHQVIT
201: VEENSAEHIM NQECDINDYL VDDDPFWASQ FPPFPSSDTM FLENISAFD

Arabidopsis Description

WRKY67Probable WRKY transcription factor 67 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.