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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G337000.1 Wheat nucleus 94.53 94.9
TraesCS3B01G375200.1 Wheat nucleus 92.19 92.55
TraesCS3A01G343000.1 Wheat nucleus 93.75 92.31
EES01666 Sorghum nucleus 54.3 58.9
Os01t0820400-01 Rice nucleus 60.16 58.11
Zm00001d043066_P001 Maize nucleus 54.3 57.92
Zm00001d012508_P001 Maize mitochondrion 41.8 45.15
GSMUA_Achr7P22020_001 Banana extracellular, nucleus 27.73 31.28
HORVU4Hr1G051970.1 Barley nucleus 14.84 30.4
GSMUA_Achr8P25110_001 Banana nucleus 20.31 23.42
HORVU4Hr1G052010.2 Barley nucleus 17.19 21.36
HORVU6Hr1G013890.3 Barley nucleus 16.8 19.46
HORVU1Hr1G090190.2 Barley nucleus 19.14 19.29
HORVU1Hr1G069620.7 Barley nucleus 22.27 19.0
HORVU3Hr1G058670.1 Barley nucleus 18.36 18.88
HORVU3Hr1G080980.1 Barley nucleus 17.97 18.78
HORVU4Hr1G022970.2 Barley nucleus, plastid 20.31 18.64
HORVU1Hr1G090170.1 Barley nucleus 17.97 18.62
HORVU1Hr1G090110.1 Barley nucleus 17.97 18.18
HORVU2Hr1G029430.2 Barley mitochondrion, nucleus 17.19 18.03
HORVU3Hr1G080890.1 Barley nucleus, plastid, vacuole 20.7 18.03
HORVU3Hr1G059220.1 Barley nucleus 21.48 17.86
HORVU5Hr1G034830.3 Barley nucleus 23.05 17.77
HORVU1Hr1G069610.1 Barley nucleus 19.92 17.65
HORVU3Hr1G059210.1 Barley nucleus 16.8 17.62
GSMUA_Achr6P25120_001 Banana nucleus 15.23 17.57
HORVU1Hr1G090130.4 Barley nucleus 17.58 17.31
HORVU1Hr1G069640.2 Barley nucleus 19.53 17.06
GSMUA_Achr5P08580_001 Banana nucleus 19.92 16.67
HORVU0Hr1G023420.1 Barley nucleus, plastid 19.92 16.35
HORVU2Hr1G006600.1 Barley nucleus 19.92 15.89
HORVU4Hr1G050320.2 Barley nucleus 18.36 15.77
HORVU0Hr1G012740.1 Barley nucleus 19.14 15.17
HORVU0Hr1G012750.1 Barley nucleus 19.53 15.06
HORVU3Hr1G081030.3 Barley nucleus 18.75 15.0
HORVU7Hr1G083270.2 Barley nucleus 17.97 14.94
HORVU7Hr1G075960.1 Barley nucleus, plastid 16.41 14.33
HORVU5Hr1G056130.2 Barley nucleus 21.48 14.03
HORVU3Hr1G080960.1 Barley nucleus 19.53 13.89
HORVU0Hr1G030830.1 Barley nucleus, plastid 14.84 13.57
HORVU2Hr1G109330.1 Barley mitochondrion, nucleus, vacuole 16.41 12.92
HORVU2Hr1G017740.3 Barley nucleus 17.19 12.64
HORVU2Hr1G017720.1 Barley nucleus, plastid 17.97 12.5
HORVU3Hr1G081000.3 Barley plastid 8.98 11.62
Protein Annotations
MapMan:15.5.22Gene3D:2.20.25.80GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0043565EnsemblPlantsGene:HORVU3Hr1G080860EnsemblPlants:HORVU3Hr1G080860.1InterPro:IPR003657InterPro:IPR036576UniProt:M0XLM5
PFAM:PF03106PFscan:PS50811PANTHER:PTHR31282PANTHER:PTHR31282:SF7SMART:SM00774SUPFAM:SSF118290
UniParc:UPI0002959448InterPro:WRKY_domInterPro:WRKY_dom_sfSEG:seg::
Description
No Description!
Coordinates
chrchr3H:-:591187318..591191422
Molecular Weight (calculated)
27676.2 Da
IEP (calculated)
7.545
GRAVY (calculated)
-0.527
Length
256 amino acids
Sequence
(BLAST)
001: MRGSSMLSSI GSNKRMLQQD CSGGSHAQEH TKKKARVGMR TDYTYAPYHD GFQWRKYGQK VIRGNAFPRC YYRCTYHQDH GCSASKHVEQ HNSADPPLFR
101: VVYTNDHTCS GAAAAASDYM ASSMHIQQIA DASLRKADTE PERPPRPQQP RSGGGCAAAI KEEKDVIVSS LLAVIRGSCD VAKSDAAHQG YSSASSLASA
201: NCYAMSPSVA GGSREGSSSS SVSPAVLPAP DDMGLGLDFM VESHWFEPLD LGWFVE
Best Arabidopsis Sequence Match ( AT1G66560.1 )
(BLAST)
001: MFSNIDQTAV AALLRGQGCA NSLKRLLENH KLSSDSTEPL IYTILNSFSL ALSFVDPPSL LPHNESSLQN MTSHVLQRSS KKKYYGAEDL EYYRDESPTP
101: RPDDGFTWRK YGQKTIKTSP YQRCYYRCTY AKDQNCNARK RVQMIQDNPP VYRTTYLGKH VCKAVAVHDD TYGSEMIKFD QVVSESVMPQ LATIDEQAIT
201: MEDEAIDHIM NQECDINDFS VDDDPFWASQ FPPFSSEDIM FFDNIANLD
Arabidopsis Description
WRKY64Probable WRKY transcription factor 64 [Source:UniProtKB/Swiss-Prot;Acc:Q9C557]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.