Factsheet for HORVU1Hr1G090170.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G006660.1
HORVU4Hr1G026290.3
HORVU4Hr1G061550.1
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4
HORVU6Hr1G079810.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23810.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT4G23810.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT4G23810.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT4G23810.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT4G23810.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT4G23810.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT4G23810.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT4G23810.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT4G23810.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT4G23810.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT4G23810.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT4G23810.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT4G23810.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT4G23810.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT4G23810.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT4G23810.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592
AT4G23810.1	HORVU4Hr1G006660.1	AT4G08500.1	17587183
AT4G23810.1	HORVU4Hr1G061550.1	AT4G08500.1	17587183
AT4G23810.1	HORVU6Hr1G079810.1	AT4G08500.1	17587183
AT4G23810.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT4G23810.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT4G23810.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT4G23810.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT4G23810.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT4G23810.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT4G23810.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT4G23810.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G418500.1	Wheat	nucleus	90.28	92.15
TraesCS1B01G440600.1	Wheat	nucleus	84.21	87.39
TraesCS1A01G410600.1	Wheat	nucleus	78.95	83.69
HORVU1Hr1G090190.2	Barley	nucleus	78.54	76.38
HORVU1Hr1G090130.4	Barley	nucleus	73.68	70.0
HORVU1Hr1G090110.1	Barley	nucleus	71.66	69.96
Os05t0571200-01	Rice	nucleus	55.06	49.1
EES18716	Sorghum	nucleus	46.96	42.65
Zm00001d009619_P002	Maize	nucleus	48.18	40.07
HORVU3Hr1G059210.1	Barley	nucleus	37.25	37.7
HORVU3Hr1G059220.1	Barley	nucleus	44.13	35.39
GSMUA_Achr3P25080_001	Banana	nucleus	35.63	26.51
HORVU4Hr1G051970.1	Barley	nucleus	13.36	26.4
HORVU2Hr1G029430.2	Barley	mitochondrion, nucleus	25.91	26.23
GSMUA_Achr3P15840_001	Banana	nucleus	26.32	26.1
VIT_15s0046g01140.t01	Wine grape	nucleus	32.79	25.08
HORVU5Hr1G034830.3	Barley	nucleus	31.58	23.49
Solyc10g009550.2.1	Tomato	nucleus	27.53	23.45
CDY03518	Canola	nucleus	29.55	23.17
Bra013732.1-P	Field mustard	nucleus	29.55	23.1
CDY47621	Canola	nucleus	29.55	23.1
CDX83367	Canola	nucleus	25.91	23.02
Bra019265.1-P	Field mustard	nucleus	29.96	22.91
Bra000423.1-P	Field mustard	nucleus	25.91	22.78
CDX94221	Canola	nucleus	29.55	22.74
CDY10969	Canola	nucleus	29.55	22.6
PGSC0003DMT400051194	Potato	nucleus	26.32	22.41
AT4G11070.1	Thale cress	nucleus	28.34	22.36
HORVU0Hr1G012740.1	Barley	nucleus	29.15	22.29
AT4G23810.1	Thale cress	nucleus	29.15	22.22
KRH77637	Soybean	nucleus	28.74	22.05
CDX95699	Canola	nucleus	25.1	21.75
VIT_16s0050g02510.t01	Wine grape	nucleus	31.98	21.7
AT2G46400.1	Thale cress	nucleus	25.91	21.69
HORVU3Hr1G058670.1	Barley	nucleus	21.86	21.69
CDY42043	Canola	nucleus	25.51	21.5
Bra004540.1-P	Field mustard	nucleus	24.7	21.4
CDX80015	Canola	nucleus	25.51	21.28
Solyc03g007380.1.1	Tomato	nucleus	30.36	21.25
CDY65042	Canola	nucleus	28.34	21.21
Solyc08g082110.2.1	Tomato	nucleus	28.74	20.94
KRH60029	Soybean	nucleus	30.77	20.94
HORVU5Hr1G056130.2	Barley	nucleus	33.2	20.92
KRH41300	Soybean	nucleus	30.36	20.89
Bra033158.1-P	Field mustard	nucleus	27.94	20.85
CDY25271	Canola	nucleus	27.94	20.85
HORVU3Hr1G080980.1	Barley	nucleus	20.65	20.82
HORVU6Hr1G013890.3	Barley	nucleus	18.62	20.81
KRH64503	Soybean	nucleus	30.36	20.6
CDX87141	Canola	nucleus	25.91	20.51
PGSC0003DMT400023502	Potato	nucleus	29.55	20.51
PGSC0003DMT400031695	Potato	nucleus	27.94	20.35
KRH53440	Soybean	nucleus	29.96	20.33
Solyc01g095630.2.1	Tomato	nucleus	27.53	20.24
Bra026467.1-P	Field mustard	nucleus	25.51	20.19
KRH68901	Soybean	nucleus	29.55	20.17
KRG97154	Soybean	nucleus	29.55	20.17
Solyc05g050330.2.1	Tomato	nucleus	19.84	20.08
HORVU4Hr1G052010.2	Barley	nucleus	16.6	19.9
VIT_02s0025g01280.t01	Wine grape	nucleus	27.53	19.88
HORVU0Hr1G012750.1	Barley	nucleus	26.72	19.88
CDY19847	Canola	nucleus	25.1	19.87
Bra014426.1-P	Field mustard	nucleus	22.27	19.86
CDX89127	Canola	nucleus	22.27	19.86
AT5G24110.1	Thale cress	nucleus	24.29	19.8
PGSC0003DMT400000599	Potato	nucleus	27.53	19.65
Bra009734.1-P	Field mustard	nucleus	24.7	19.49
CDX88077	Canola	nucleus	24.7	19.49
CDX80414	Canola	nucleus	24.7	19.49
Solyc05g050300.1.1	Tomato	nucleus	15.38	19.49
PGSC0003DMT400014949	Potato	nucleus	28.34	19.44
Solyc08g008280.2.1	Tomato	nucleus	27.94	19.17
KRH47935	Soybean	nucleus	27.94	18.7
PGSC0003DMT400046351	Potato	nucleus	22.67	18.6
KRH06499	Soybean	nucleus	27.94	18.5
HORVU3Hr1G080860.1	Barley	nucleus	18.62	17.97
HORVU1Hr1G069620.7	Barley	nucleus	21.46	17.67
PGSC0003DMT400084227	Potato	nucleus	20.65	17.35
HORVU0Hr1G030830.1	Barley	nucleus, plastid	19.43	17.14
HORVU4Hr1G050320.2	Barley	nucleus	20.65	17.11
HORVU3Hr1G081000.3	Barley	plastid	13.36	16.67
HORVU3Hr1G081030.3	Barley	nucleus	21.05	16.25
HORVU7Hr1G083270.2	Barley	nucleus	20.24	16.23
HORVU4Hr1G022970.2	Barley	nucleus, plastid	18.22	16.13
HORVU2Hr1G017740.3	Barley	nucleus	22.27	15.8
Solyc05g050340.2.1	Tomato	nucleus	20.65	15.6
PGSC0003DMT400084214	Potato	nucleus	20.65	15.41
HORVU7Hr1G075960.1	Barley	nucleus, plastid	18.22	15.36
HORVU2Hr1G006600.1	Barley	nucleus	19.84	15.26
Solyc05g050310.1.1	Tomato	cytosol, nucleus	3.64	15.25
HORVU2Hr1G017720.1	Barley	nucleus, plastid	22.67	15.22
HORVU2Hr1G109330.1	Barley	mitochondrion, nucleus, vacuole	19.84	15.08
HORVU3Hr1G080890.1	Barley	nucleus, plastid, vacuole	17.41	14.63
HORVU1Hr1G069640.2	Barley	nucleus	16.19	13.65
HORVU1Hr1G069610.1	Barley	nucleus	15.38	13.15
HORVU0Hr1G023420.1	Barley	nucleus, plastid	15.38	12.18
HORVU3Hr1G080960.1	Barley	nucleus	17.41	11.94
CDX80415	Canola	nucleus	4.86	8.11

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU1Hr1G090170	EnsemblPlants:HORVU1Hr1G090170.1	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0Y4T7	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF52	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000295A121	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

No Description!

Coordinates

chrchr1H:+:545489557..545490934

Molecular Weight (calculated)

25791.5 Da

IEP (calculated)

6.118

GRAVY (calculated)

-0.205

Length

247 amino acids

Sequence
(BLAST)

001: MEDAAATLAT ELDGLLAMAR ELEARVDGDQ GAPGAARELC SALAASVDRA VRLAGRGRNA GARAGVNGQL RSGRKAAAAK VRTQVRVASM QDLGPLDDGM
101: SWRKYGQKGI LGATYPRSYF RCTHRHTQGC AATKQVQRAT ADPLLFDVVY VGAHTCAGAA VLGGTEQQLP PPAAFGQEQQ SPPAAAPEGV QLPAEPVTPF
201: SFPSSPASSW CQLTGSYGYA APGGGLGVDM ELEGQLDELF LHMSEFF

Best Arabidopsis Sequence Match ( AT4G11070.2 )
(BLAST)

001: MEMMNWERRS LLNELIHGLK AAKQLQAILM LNGSTTQHNP TIELAPDPLA HPGKVPGSPA SITGNPRSEE FFNVRSKEFN LSSKKRKMLP KWTEQVRISP
101: ERGLEGPHDD IFSWRKYGQK DILGAKFPRS YYRCTFRNTQ YCWATKQVQR SDGDPTIFEV TYRGTHTCSQ GIPLPEKRET KPKHTVAVNY QNLRASLTVR
201: TGGLGSEAFS FPVTSPLYTY ESINGGGTFY HHVGSSGPSD FTGLISTNTS TGSSPIFDVN FQFDPTAEIN TGFPTFFHNS I

Arabidopsis Description

WRKY41Probable WRKY transcription factor 41 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.