Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80414 | Canola | nucleus | 74.32 | 35.14 |
| Bra009734.1-P | Field mustard | nucleus | 72.3 | 34.19 |
| CDX88077 | Canola | nucleus | 72.3 | 34.19 |
| CDX87141 | Canola | nucleus | 67.57 | 32.05 |
| CDY19847 | Canola | nucleus | 66.89 | 31.73 |
| AT5G24110.1 | Thale cress | nucleus | 58.78 | 28.71 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 8.78 | 22.03 |
| CDX94221 | Canola | nucleus | 31.76 | 14.64 |
| CDY10969 | Canola | nucleus | 29.05 | 13.31 |
| CDY03518 | Canola | nucleus | 27.7 | 13.02 |
| CDY47621 | Canola | nucleus | 27.03 | 12.66 |
| CDY65042 | Canola | nucleus | 25.0 | 11.21 |
| CDY25271 | Canola | nucleus | 25.0 | 11.18 |
| CDX80015 | Canola | nucleus | 20.27 | 10.14 |
| CDY42043 | Canola | nucleus | 19.59 | 9.9 |
| CDX95699 | Canola | nucleus | 18.92 | 9.82 |
| CDX83367 | Canola | nucleus | 18.24 | 9.71 |
| EES18716 | Sorghum | nucleus | 17.57 | 9.56 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 15.54 | 9.43 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 18.24 | 9.28 |
| CDX89127 | Canola | nucleus | 16.89 | 9.03 |
| Solyc05g050330.2.1 | Tomato | nucleus | 14.86 | 9.02 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 21.62 | 8.89 |
| EER96590 | Sorghum | nucleus | 19.59 | 8.84 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 14.86 | 8.84 |
| Zm00001d020137_P001 | Maize | nucleus | 18.92 | 8.64 |
| GSMUA_AchrUn_... | Banana | nucleus | 16.89 | 8.47 |
| Zm00001d005622_P001 | Maize | nucleus | 18.92 | 8.46 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 17.57 | 8.44 |
| Os09t0334500-01 | Rice | nucleus | 20.27 | 8.31 |
| Solyc05g050340.2.1 | Tomato | nucleus | 18.24 | 8.26 |
| PGSC0003DMT400084227 | Potato | nucleus | 16.22 | 8.16 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 18.24 | 8.13 |
| Zm00001d050247_P001 | Maize | nucleus | 17.57 | 8.12 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 16.22 | 8.11 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 18.92 | 8.09 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 18.92 | 8.02 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 18.92 | 7.98 |
| PGSC0003DMT400046351 | Potato | nucleus | 16.22 | 7.97 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 18.24 | 7.96 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 18.24 | 7.92 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 20.95 | 7.91 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 18.24 | 7.87 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 15.54 | 7.85 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 15.54 | 7.85 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 17.57 | 7.83 |
| Zm00001d044010_P001 | Maize | nucleus | 17.57 | 7.76 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 16.89 | 7.74 |
| Zm00001d011496_P002 | Maize | nucleus | 16.89 | 7.65 |
| Os05t0571200-01 | Rice | nucleus | 14.19 | 7.58 |
| PGSC0003DMT400084214 | Potato | nucleus | 16.89 | 7.55 |
| EES03370 | Sorghum | nucleus | 17.57 | 7.51 |
| Zm00001d032265_P001 | Maize | nucleus | 16.89 | 7.51 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 12.16 | 7.38 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 16.89 | 7.35 |
| OQU80381 | Sorghum | nucleus | 16.89 | 7.35 |
| CDY22473 | Canola | nucleus | 14.86 | 7.33 |
| CDY35442 | Canola | nucleus | 14.86 | 7.31 |
| Os11t0685700-00 | Rice | nucleus | 9.46 | 7.29 |
| Os08t0386200-01 | Rice | nucleus | 15.54 | 7.21 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 14.86 | 7.1 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 11.49 | 7.05 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 16.22 | 6.88 |
| Zm00001d009619_P002 | Maize | nucleus | 13.51 | 6.73 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 11.49 | 6.67 |
| Os01t0656400-00 | Rice | nucleus | 12.16 | 6.57 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 11.49 | 6.54 |
| CDX72140 | Canola | nucleus | 12.16 | 6.52 |
| CDY27218 | Canola | nucleus | 12.16 | 6.52 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 10.81 | 6.5 |
| CDX75991 | Canola | nucleus | 11.49 | 6.44 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 10.81 | 6.3 |
| Zm00001d020136_P001 | Maize | nucleus | 12.84 | 6.29 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 10.81 | 6.13 |
| EER96589 | Sorghum | nucleus | 12.84 | 6.13 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 10.14 | 6.07 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 10.14 | 6.07 |
| CDY59625 | Canola | nucleus | 10.81 | 6.06 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 9.46 | 6.01 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 10.14 | 5.93 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 10.14 | 5.93 |
| CDY14738 | Canola | nucleus | 12.84 | 5.76 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 9.46 | 5.71 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 14.19 | 5.71 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 11.49 | 5.48 |
| CDY06967 | Canola | nucleus | 12.16 | 5.45 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 13.51 | 5.31 |
| CDX67645 | Canola | nucleus | 10.14 | 5.3 |
| CDY32013 | Canola | nucleus | 10.14 | 5.3 |
| CDY22474 | Canola | nucleus | 12.16 | 5.29 |
| EER87882 | Sorghum | nucleus | 13.51 | 5.29 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 12.84 | 5.12 |
| Zm00001d045283_P001 | Maize | nucleus | 13.51 | 5.05 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 8.11 | 5.04 |
| CDY23883 | Canola | nucleus | 11.49 | 5.01 |
| CDY35441 | Canola | nucleus | 11.49 | 5.0 |
| CDX75992 | Canola | nucleus | 9.46 | 4.91 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 8.11 | 4.86 |
| CDX79972 | Canola | nucleus | 10.81 | 4.75 |
| Zm00001d036244_P001 | Maize | nucleus | 11.49 | 4.64 |
| Os06t0158100-00 | Rice | nucleus | 12.16 | 4.6 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 7.43 | 4.55 |
| CDY66845 | Canola | nucleus | 8.11 | 4.18 |
| Solyc05g050300.1.1 | Tomato | nucleus | 4.73 | 3.59 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 7.43 | 3.31 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 4.73 | 2.81 |
| CDY71829 | Canola | nucleus | 4.73 | 2.78 |
| CDY13358 | Canola | nucleus | 2.7 | 2.56 |
| CDY06968 | Canola | nucleus | 1.35 | 1.29 |
Protein Annotations
| EnsemblPlants:CDX80415 | EnsemblPlantsGene:GSBRNA2T00133483001 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF34 | ProteinID:CDX80415 | ProteinID:CDX80415.1 |
| SEG:seg | UniParc:UPI0004EE5EE3 | MapMan:35.1 | : | : | : |
Description
BnaC07g30290D
Coordinates
chrLK031821:-:305494..306908
Molecular Weight (calculated)
16778.8 Da
IEP (calculated)
7.423
GRAVY (calculated)
-0.804
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MERKSNSGEW EKMKKEISEL MTEGRDYVHE LKSQLGSSSS DQESREHLAK KILESYHKSL TIMNHSGELD QVSPHIHGGG SPKSDDSDQE PHQNIKRPVS
101: LLHFIIARSA SNVLQSKSQT LSLSRNPLYI PLFQIYLLQA MHNTHTSS
101: LLHFIIARSA SNVLQSKSQT LSLSRNPLYI PLFQIYLLQA MHNTHTSS
001: MEKNHSSGEW EKMKNEINEL MIEGRDYAHQ FGSASSQETR EHLAKKILQS YHKSLTIMNY SGELDQVSQG GGSPKSDDSD QEPLVIKSSK KSMPRWSSKV
101: RIAPGAGVDR TLDDGFSWRK YGQKDILGAK FPRGYYRCTY RKSQGCEATK QVQRSDENQM LLEISYRGIH SCSQAANVGT TMPIQNLEPN QTQEHGNLDM
201: VKESVDNYNH QAHLHHNLHY PLSSTPNLEN NNAYMLQMRD QNIEYFGSTS FSSDLGTSIN YNFPASGSAS HSASNSPSTV PLESPFESYD PNHPYGGFGG
301: FYS
101: RIAPGAGVDR TLDDGFSWRK YGQKDILGAK FPRGYYRCTY RKSQGCEATK QVQRSDENQM LLEISYRGIH SCSQAANVGT TMPIQNLEPN QTQEHGNLDM
201: VKESVDNYNH QAHLHHNLHY PLSSTPNLEN NNAYMLQMRD QNIEYFGSTS FSSDLGTSIN YNFPASGSAS HSASNSPSTV PLESPFESYD PNHPYGGFGG
301: FYS
Arabidopsis Description
WRKY30Probable WRKY transcription factor 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL62]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.