Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G059220.1 | Barley | nucleus | 94.85 | 89.61 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 66.32 | 79.1 |
| Os01t0656400-00 | Rice | nucleus | 51.55 | 54.74 |
| Zm00001d011496_P002 | Maize | nucleus | 54.98 | 48.93 |
| EES03370 | Sorghum | nucleus | 57.73 | 48.55 |
| Zm00001d044010_P001 | Maize | nucleus | 51.89 | 45.07 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 37.11 | 44.63 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 38.49 | 43.92 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 37.11 | 43.72 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 35.4 | 41.87 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 31.27 | 36.55 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 36.08 | 32.51 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 31.96 | 31.74 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 35.74 | 31.33 |
| AT4G23810.1 | Thale cress | nucleus | 33.33 | 29.94 |
| CDY03518 | Canola | nucleus | 32.3 | 29.84 |
| Bra013732.1-P | Field mustard | nucleus | 32.3 | 29.75 |
| Solyc10g009550.2.1 | Tomato | nucleus | 29.55 | 29.66 |
| CDY47621 | Canola | nucleus | 31.96 | 29.43 |
| PGSC0003DMT400051194 | Potato | nucleus | 29.21 | 29.31 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 34.02 | 29.03 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 34.02 | 28.95 |
| CDY65042 | Canola | nucleus | 32.65 | 28.79 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 34.71 | 28.77 |
| AT4G11070.1 | Thale cress | nucleus | 30.93 | 28.75 |
| KRH68901 | Soybean | nucleus | 35.74 | 28.73 |
| KRG97154 | Soybean | nucleus | 35.74 | 28.73 |
| CDX94221 | Canola | nucleus | 31.62 | 28.66 |
| PGSC0003DMT400031695 | Potato | nucleus | 33.33 | 28.61 |
| Bra019265.1-P | Field mustard | nucleus | 31.62 | 28.48 |
| Solyc08g082110.2.1 | Tomato | nucleus | 32.99 | 28.32 |
| KRH41300 | Soybean | nucleus | 34.71 | 28.13 |
| Bra033158.1-P | Field mustard | nucleus | 31.96 | 28.1 |
| CDY25271 | Canola | nucleus | 31.96 | 28.1 |
| CDY10969 | Canola | nucleus | 30.93 | 27.86 |
| PGSC0003DMT400014949 | Potato | nucleus | 34.36 | 27.78 |
| KRH77637 | Soybean | nucleus | 29.55 | 26.71 |
| Solyc08g008280.2.1 | Tomato | nucleus | 32.99 | 26.67 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 33.33 | 26.65 |
| CDX87141 | Canola | nucleus | 28.18 | 26.28 |
| Bra026467.1-P | Field mustard | nucleus | 28.18 | 26.28 |
| KRH06499 | Soybean | nucleus | 33.68 | 26.27 |
| KRH60029 | Soybean | nucleus | 32.65 | 26.17 |
| Solyc03g007380.1.1 | Tomato | nucleus | 31.62 | 26.06 |
| CDY19847 | Canola | nucleus | 27.84 | 25.96 |
| KRH47935 | Soybean | nucleus | 32.65 | 25.75 |
| AT5G24110.1 | Thale cress | nucleus | 26.8 | 25.74 |
| Bra014426.1-P | Field mustard | nucleus | 24.4 | 25.63 |
| CDX89127 | Canola | nucleus | 24.4 | 25.63 |
| CDX80414 | Canola | nucleus | 27.49 | 25.56 |
| PGSC0003DMT400023502 | Potato | nucleus | 30.93 | 25.28 |
| Bra004540.1-P | Field mustard | nucleus | 24.74 | 25.26 |
| CDY42043 | Canola | nucleus | 25.43 | 25.26 |
| CDX80015 | Canola | nucleus | 25.43 | 25.0 |
| KRH64503 | Soybean | nucleus | 31.27 | 25.0 |
| Bra000423.1-P | Field mustard | nucleus | 24.05 | 24.91 |
| KRH53440 | Soybean | nucleus | 30.93 | 24.73 |
| Bra009734.1-P | Field mustard | nucleus | 26.46 | 24.6 |
| CDX88077 | Canola | nucleus | 26.46 | 24.6 |
| AT2G46400.1 | Thale cress | nucleus | 24.74 | 24.41 |
| PGSC0003DMT400000599 | Potato | nucleus | 28.87 | 24.28 |
| CDX83367 | Canola | nucleus | 23.02 | 24.1 |
| CDX95699 | Canola | nucleus | 23.37 | 23.86 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 4.81 | 23.73 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 28.87 | 22.83 |
| Solyc01g095630.2.1 | Tomato | nucleus | 26.12 | 22.62 |
| Solyc05g050300.1.1 | Tomato | nucleus | 15.12 | 22.56 |
| TraesCS1D01G300700.1 | Wheat | nucleus | 22.68 | 21.78 |
| Solyc05g050330.2.1 | Tomato | nucleus | 18.21 | 21.72 |
| TraesCS3D01G337100.1 | Wheat | nucleus | 19.59 | 21.35 |
| PGSC0003DMT400046351 | Potato | nucleus | 21.99 | 21.26 |
| TraesCS3D01G337000.1 | Wheat | nucleus | 18.56 | 21.18 |
| TraesCS3D01G337500.1 | Wheat | nucleus | 19.59 | 21.11 |
| TraesCS2D01G042700.1 | Wheat | nucleus | 20.96 | 20.82 |
| TraesCS3D01G337600.1 | Wheat | nucleus | 19.24 | 20.66 |
| PGSC0003DMT400084227 | Potato | nucleus | 20.62 | 20.41 |
| TraesCS1D01G300500.1 | Wheat | plastid | 21.31 | 20.2 |
| TraesCS7D01G345700.1 | Wheat | nucleus | 20.27 | 19.8 |
| TraesCS1D01G300900.1 | Wheat | nucleus | 19.59 | 19.66 |
| TraesCS1D01G300600.1 | Wheat | nucleus | 18.56 | 18.82 |
| TraesCS2D01G489700.1 | Wheat | nucleus | 18.56 | 18.43 |
| CDX80415 | Canola | nucleus | 9.28 | 18.24 |
| PGSC0003DMT400084214 | Potato | nucleus | 20.62 | 18.13 |
| TraesCS1D01G300400.1 | Wheat | nucleus | 17.87 | 18.12 |
| TraesCS1D01G300300.1 | Wheat | nucleus | 18.9 | 17.92 |
| TraesCS4D01G172200.1 | Wheat | nucleus | 18.21 | 17.73 |
| TraesCS3D01G337400.1 | Wheat | nucleus | 19.59 | 17.7 |
| TraesCS2D01G104500.1 | Wheat | nucleus | 20.96 | 17.38 |
| TraesCS4D01G119700.1 | Wheat | nucleus | 13.06 | 17.12 |
| TraesCS4D01G178400.1 | Wheat | nucleus | 12.03 | 16.99 |
| TraesCS2D01G104600.1 | Wheat | nucleus | 19.59 | 16.96 |
| TraesCS2D01G497600.1 | Wheat | nucleus | 20.96 | 16.85 |
| Solyc05g050340.2.1 | Tomato | nucleus | 18.9 | 16.82 |
| TraesCS2D01G104700.1 | Wheat | nucleus | 18.9 | 15.9 |
| TraesCS2D01G497700.1 | Wheat | nucleus | 19.24 | 15.51 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 20.27 | 15.13 |
| TraesCS3D01G337300.1 | Wheat | nucleus | 18.9 | 14.67 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR32096 | PANTHER:PTHR32096:SF52 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS3D01G238300 | EnsemblPlants:TraesCS3D01G238300.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3D:-:329602837..329603881
Molecular Weight (calculated)
30871.0 Da
IEP (calculated)
7.458
GRAVY (calculated)
-0.570
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MEERCALATE LAQVLDTVRQ LEAHMGVKGG ADGGETCRAL VSSMRSSVDR SIHIAMSSCC VVLGAPESPP SAGGSPRSGG SDQAADSPCR GAHAAGQSKK
101: RKTQPKWSTQ VRVNSVEDVG PLDDGFSWRK YGQKDILGAK YPRAYFRCTH RHTQGCYASK QVQRAHGDPL LFDVVYHGNH TCVQGKHCNS QTPQPAASGE
201: HRQPQPAGGQ ERVSVGQKTD GGVAAPFSFP SKQAGADTGS DFQAGCATTA SPFMSPATSE CKASTTESPM GDMDFMLQLA DADFLDNSRY L
101: RKTQPKWSTQ VRVNSVEDVG PLDDGFSWRK YGQKDILGAK YPRAYFRCTH RHTQGCYASK QVQRAHGDPL LFDVVYHGNH TCVQGKHCNS QTPQPAASGE
201: HRQPQPAGGQ ERVSVGQKTD GGVAAPFSFP SKQAGADTGS DFQAGCATTA SPFMSPATSE CKASTTESPM GDMDFMLQLA DADFLDNSRY L
001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
Arabidopsis Description
WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.