Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G108000.1 | Wheat | nucleus | 91.03 | 90.56 |
| TraesCS6A01G080500.1 | Wheat | nucleus | 90.77 | 90.54 |
| HORVU6Hr1G013890.3 | Barley | nucleus | 50.0 | 88.24 |
| Os05t0321900-01 | Rice | nucleus | 55.9 | 50.93 |
| OQU77713 | Sorghum | nucleus | 48.72 | 50.26 |
| Zm00001d037854_P001 | Maize | extracellular | 50.77 | 48.41 |
| GSMUA_Achr8P01730_001 | Banana | nucleus | 35.38 | 44.95 |
| CDY06968 | Canola | nucleus | 16.92 | 42.58 |
| CDY13358 | Canola | nucleus | 15.9 | 39.74 |
| GSMUA_Achr9P04830_001 | Banana | nucleus | 16.67 | 35.71 |
| AT2G40740.3 | Thale cress | nucleus | 27.44 | 35.55 |
| GSMUA_Achr6P32460_001 | Banana | nucleus | 29.23 | 34.97 |
| Bra016975.1-P | Field mustard | nucleus | 24.87 | 34.15 |
| CDY71829 | Canola | nucleus | 22.05 | 34.13 |
| Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 20.51 | 32.92 |
| CDY22473 | Canola | nucleus | 25.13 | 32.67 |
| Bra000202.1-P | Field mustard | nucleus | 24.87 | 32.33 |
| CDY35442 | Canola | nucleus | 24.87 | 32.23 |
| KRH53718 | Soybean | nucleus | 26.41 | 31.12 |
| KRH64215 | Soybean | nucleus | 26.67 | 30.86 |
| PGSC0003DMT400022638 | Potato | nucleus | 26.41 | 29.68 |
| CDY59625 | Canola | nucleus | 19.23 | 28.41 |
| Bra014693.1-P | Field mustard | nucleus | 18.97 | 28.03 |
| CDX75991 | Canola | nucleus | 18.97 | 28.03 |
| VIT_13s0067g03130.t01 | Wine grape | nucleus | 26.15 | 28.02 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 14.87 | 23.58 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 14.36 | 23.14 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 17.18 | 22.87 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 14.1 | 22.27 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 18.97 | 21.7 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 19.49 | 21.65 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 14.1 | 21.57 |
| TraesCS4D01G178400.1 | Wheat | nucleus | 11.28 | 21.36 |
| TraesCS1D01G300700.1 | Wheat | nucleus | 15.9 | 20.46 |
| TraesCS4D01G172200.1 | Wheat | nucleus | 15.64 | 20.4 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 15.13 | 20.27 |
| TraesCS4D01G119700.1 | Wheat | nucleus | 11.28 | 19.82 |
| TraesCS3D01G337600.1 | Wheat | nucleus | 13.59 | 19.56 |
| TraesCS7D01G345700.1 | Wheat | nucleus | 14.87 | 19.46 |
| TraesCS3D01G337500.1 | Wheat | nucleus | 13.33 | 19.26 |
| TraesCS3D01G337400.1 | Wheat | nucleus | 15.9 | 19.25 |
| TraesCS2D01G104500.1 | Wheat | nucleus | 17.18 | 19.09 |
| TraesCS2D01G489700.1 | Wheat | nucleus | 14.1 | 18.77 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 17.69 | 18.75 |
| TraesCS3D01G337100.1 | Wheat | nucleus | 12.82 | 18.73 |
| TraesCS2D01G104700.1 | Wheat | nucleus | 16.41 | 18.5 |
| TraesCS1D01G300400.1 | Wheat | nucleus | 13.59 | 18.47 |
| TraesCS1D01G300600.1 | Wheat | nucleus | 13.59 | 18.47 |
| TraesCS3D01G337000.1 | Wheat | nucleus | 12.05 | 18.43 |
| TraesCS1D01G300500.1 | Wheat | plastid | 14.36 | 18.24 |
| TraesCS2D01G104600.1 | Wheat | nucleus | 15.38 | 17.86 |
| TraesCS1D01G300300.1 | Wheat | nucleus | 13.85 | 17.59 |
| TraesCS1D01G300900.1 | Wheat | nucleus | 12.56 | 16.9 |
| TraesCS2D01G497600.1 | Wheat | nucleus | 14.62 | 15.75 |
| TraesCS2D01G042700.1 | Wheat | nucleus | 11.54 | 15.36 |
| TraesCS2D01G497700.1 | Wheat | nucleus | 13.85 | 14.96 |
| TraesCS3D01G337300.1 | Wheat | nucleus | 13.08 | 13.6 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF38 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS6D01G074200 | EnsemblPlants:TraesCS6D01G074200.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6D:-:37903034..37905705
Molecular Weight (calculated)
41039.3 Da
IEP (calculated)
7.988
GRAVY (calculated)
-0.341
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MHVLAPHSGG PPFAPLLGHL DRRLREGIAA IHGGDLPGGM DDVLSQIGDA FRLAGELMGD LPAAQNDPAY LAARCYGIVR AYNTAIRMLQ HHGVGAVNVA
101: AARPLDGGGP LDLLRPRSTE EAAGASQLLG ETATRLQEPF NMLAGARAPP HAVRSAADVA GTSGGPMRRL ASSRSPPTAQ PRQGRRRRDS GHRETMLVPA
201: HRMGNTELPP DDGYTWRKYG QKDILGSRFP RSYYRCTHKN YYGCDAKKKV QRLDDDPFMY EVTYCGSHSC LTSTTPLLNF PTATATATAT ATNSPTAATG
301: SGLAPADHFM AQTDQAAVST SMHLGVGGMP ASFQGVVAAG SGAGVQTSVS TAARDTDYPA LDLADVMFNS SGSTGISLDG IFSSHHRSDS
101: AARPLDGGGP LDLLRPRSTE EAAGASQLLG ETATRLQEPF NMLAGARAPP HAVRSAADVA GTSGGPMRRL ASSRSPPTAQ PRQGRRRRDS GHRETMLVPA
201: HRMGNTELPP DDGYTWRKYG QKDILGSRFP RSYYRCTHKN YYGCDAKKKV QRLDDDPFMY EVTYCGSHSC LTSTTPLLNF PTATATATAT ATNSPTAATG
301: SGLAPADHFM AQTDQAAVST SMHLGVGGMP ASFQGVVAAG SGAGVQTSVS TAARDTDYPA LDLADVMFNS SGSTGISLDG IFSSHHRSDS
001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
Arabidopsis Description
WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.