Factsheet for TraesCS1D01G300700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G301100.1	Wheat	plastid	94.39	94.39
TraesCS1D01G300500.1	Wheat	plastid	68.65	67.75
TraesCS1D01G300300.1	Wheat	nucleus	66.34	65.47
TraesCS2D01G042700.1	Wheat	nucleus	48.18	49.83
Os05t0478400-00	Rice	nucleus	56.11	47.49
TraesCS3D01G337500.1	Wheat	nucleus	33.33	37.41
TraesCS3D01G337600.1	Wheat	nucleus	33.33	37.27
PGSC0003DMT400021625	Potato	nucleus	18.15	25.23
PGSC0003DMT400070939	Potato	nucleus	18.15	24.66
KRH09521	Soybean	nucleus	21.45	24.53
TraesCS1D01G418500.1	Wheat	nucleus	19.47	24.38
TraesCS1D01G418600.1	Wheat	nucleus	19.8	24.29
TraesCS3D01G337000.1	Wheat	nucleus	19.8	23.53
KRH16921	Soybean	nucleus	18.48	23.33
TraesCS1D01G418000.1	Wheat	nucleus	18.48	22.76
GSMUA_Achr5P07490_001	Banana	endoplasmic reticulum	25.08	22.69
VIT_13s0067g03140.t01	Wine grape	nucleus	23.43	22.68
TraesCS3D01G238300.1	Wheat	nucleus	21.78	22.68
TraesCS2D01G489700.1	Wheat	nucleus	21.45	22.18
KRH00435	Soybean	nucleus	21.78	22.07
TraesCS4D01G172200.1	Wheat	nucleus	21.78	22.07
KRH40720	Soybean	nucleus	21.78	22.0
TraesCS1D01G418400.1	Wheat	nucleus	18.48	21.96
TraesCS7D01G345700.1	Wheat	nucleus	21.45	21.81
KRH64216	Soybean	nucleus	22.77	21.77
TraesCS2D01G168600.1	Wheat	nucleus	20.79	21.5
KRH21928	Soybean	nucleus	19.14	21.48
KRH53716	Soybean	nucleus	22.44	21.32
TraesCS2D01G104600.1	Wheat	nucleus	23.43	21.13
TraesCS2D01G104700.1	Wheat	nucleus	24.09	21.1
PGSC0003DMT400053122	Potato	nucleus	18.81	20.58
TraesCS5D01G190700.1	Wheat	nucleus	23.1	20.53
Solyc03g095770.2.1	Tomato	nucleus	18.48	20.51
KRH21925	Soybean	nucleus	19.8	20.41
TraesCS4D01G178400.1	Wheat	nucleus	13.86	20.39
CDX72140	Canola	nucleus	18.48	20.29
Bra000203.1-P	Field mustard	nucleus	22.44	20.0
CDY35441	Canola	nucleus	22.44	20.0
TraesCS2D01G104500.1	Wheat	nucleus	23.1	19.94
Bra007243.1-P	Field mustard	nucleus	18.15	19.93
CDY27218	Canola	nucleus	18.15	19.93
AT3G56400.1	Thale cress	nucleus	19.14	19.73
CDY22474	Canola	nucleus	22.11	19.71
TraesCS5D01G190800.1	Wheat	nucleus	22.77	19.66
KRH21926	Soybean	nucleus	19.14	19.59
CDY66845	Canola	nucleus	18.48	19.51
TraesCS4D01G119700.1	Wheat	nucleus	14.19	19.37
Bra014692.1-P	Field mustard	nucleus	18.15	19.3
CDX75992	Canola	nucleus	18.15	19.3
KRH16920	Soybean	nucleus	19.14	19.14
Solyc09g015770.2.1	Tomato	extracellular, nucleus	18.15	18.9
TraesCS7D01G110600.1	Wheat	nucleus	22.77	18.75
CDX67645	Canola	nucleus	17.49	18.73
CDY32013	Canola	nucleus	17.49	18.73
Bra003239.1-P	Field mustard	nucleus	17.49	18.73
TraesCS3D01G337100.1	Wheat	nucleus	16.5	18.73
CDX79972	Canola	nucleus	20.79	18.69
CDY23883	Canola	nucleus	20.79	18.58
Bra004586.1-P	Field mustard	nucleus	20.79	18.58
PGSC0003DMT400075091	Potato	nucleus	17.82	18.43
TraesCS3D01G337400.1	Wheat	nucleus	19.47	18.32
TraesCS1D01G300600.1	Wheat	nucleus	17.16	18.12
KRH21927	Soybean	nucleus	17.49	17.67
KRH16918	Soybean	nucleus	19.14	17.63
KRH64882	Soybean	nucleus	13.53	17.45
TraesCS1D01G300400.1	Wheat	nucleus	16.5	17.42
VIT_08s0058g01390.t01	Wine grape	nucleus	20.46	17.37
CDY06967	Canola	nucleus	18.48	16.97
Bra016974.1-P	Field mustard	nucleus	18.48	16.97
TraesCS1D01G300900.1	Wheat	nucleus	16.17	16.9
CDY14738	Canola	nucleus	18.15	16.67
TraesCS2D01G497600.1	Wheat	nucleus	19.8	16.57
TraesCS6D01G074200.1	Wheat	nucleus	20.46	15.9
AT2G40750.1	Thale cress	nucleus	18.15	15.9
TraesCS2D01G497700.1	Wheat	nucleus	18.48	15.51
TraesCS3D01G337300.1	Wheat	nucleus	19.14	15.47

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31282	PANTHER:PTHR31282:SF10	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS1D01G300700	EnsemblPlants:TraesCS1D01G300700.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1D:-:398852072..398853105

Molecular Weight (calculated)

32415.4 Da

IEP (calculated)

4.670

GRAVY (calculated)

-0.428

Length

303 amino acids

Sequence
(BLAST)

001: MAALVTPAGC PSVSELVVQG RDSAAVLEAL LRGASSPDNA GIRELAAEIL RCCDRALAAL HGGEGAVVDV SGGRKRKSGP GGADNLTRPK RRMRASGGEK
101: AARVERRRTA EDGFIWRKYG QKEIHNNKHP RLYFRCTYKH DIGCPATRQV QQAEDDPSLY VITYFGDHTC CQGDAAGAVL EAEDVKMQPF VINFGSATAS
201: SGSPWLSSPS DTDDVRRSDS GASGSSQAVC SPEEFEVKEA KVESTSEDSQ TVDPAAAELS SSADFSCASP AWDPLSGCLD WDHFGDSPFD CEFLDFDAIP
301: LFQ

Best Arabidopsis Sequence Match ( AT3G56400.1 )
(BLAST)

001: MDTNKAKKLK VMNQLVEGHD LTTQLQQLLS QPGSGLEDLV AKILVCFNNT ISVLDTFEPI SSSSSLAAVE GSQNASCDND GKFEDSGDSR KRLGPVKGKR
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS

Arabidopsis Description

WRKY70Probable WRKY transcription factor 70 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY00]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.