Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35441 | Canola | nucleus | 100.0 | 100.0 |
| CDY22474 | Canola | nucleus | 97.06 | 97.06 |
| Bra004586.1-P | Field mustard | nucleus | 77.06 | 77.29 |
| Bra016974.1-P | Field mustard | nucleus | 71.47 | 73.64 |
| AT2G40750.1 | Thale cress | nucleus | 72.06 | 70.81 |
| Bra003239.1-P | Field mustard | nucleus | 41.76 | 50.18 |
| Bra007243.1-P | Field mustard | nucleus | 40.29 | 49.64 |
| Bra014692.1-P | Field mustard | nucleus | 40.59 | 48.42 |
| PGSC0003DMT400021625 | Potato | nucleus | 17.35 | 27.06 |
| PGSC0003DMT400070939 | Potato | nucleus | 17.65 | 26.91 |
| KRH16921 | Soybean | nucleus | 16.76 | 23.75 |
| VIT_13s0067g03140.t01 | Wine grape | nucleus | 20.88 | 22.68 |
| TraesCS1D01G300700.1 | Wheat | nucleus | 20.0 | 22.44 |
| Os05t0478800-00 | Rice | nucleus | 14.71 | 22.42 |
| KRH53716 | Soybean | nucleus | 20.88 | 22.26 |
| KRH64216 | Soybean | nucleus | 20.59 | 22.08 |
| KRH40720 | Soybean | nucleus | 19.41 | 22.0 |
| KRH09521 | Soybean | nucleus | 17.06 | 21.89 |
| TraesCS1A01G301100.1 | Wheat | plastid | 19.12 | 21.45 |
| KRH16918 | Soybean | nucleus | 20.59 | 21.28 |
| Bra014693.1-P | Field mustard | nucleus | 16.47 | 21.21 |
| KRH16920 | Soybean | nucleus | 18.82 | 21.12 |
| KRH21928 | Soybean | nucleus | 16.76 | 21.11 |
| KRH00435 | Soybean | nucleus | 18.53 | 21.07 |
| Bra019265.1-P | Field mustard | nucleus | 20.0 | 21.05 |
| PGSC0003DMT400053122 | Potato | nucleus | 17.06 | 20.94 |
| Solyc03g095770.2.1 | Tomato | nucleus | 16.76 | 20.88 |
| TraesCS7B01G249700.1 | Wheat | nucleus | 16.76 | 20.8 |
| Bra014426.1-P | Field mustard | nucleus | 16.76 | 20.58 |
| Bra000423.1-P | Field mustard | nucleus | 16.76 | 20.28 |
| Bra033158.1-P | Field mustard | nucleus | 19.71 | 20.24 |
| HORVU1Hr1G069620.7 | Barley | nucleus | 17.65 | 20.0 |
| Bra013732.1-P | Field mustard | nucleus | 18.53 | 19.94 |
| Solyc09g015770.2.1 | Tomato | extracellular, nucleus | 17.06 | 19.93 |
| Bra026467.1-P | Field mustard | nucleus | 18.24 | 19.87 |
| PGSC0003DMT400075091 | Potato | nucleus | 17.06 | 19.8 |
| TraesCS1A01G300900.1 | Wheat | nucleus | 17.94 | 19.74 |
| TraesCS2A01G489500.1 | Wheat | nucleus | 17.06 | 19.73 |
| Bra004540.1-P | Field mustard | nucleus | 16.47 | 19.65 |
| KRH21926 | Soybean | nucleus | 17.06 | 19.59 |
| TraesCS1D01G300500.1 | Wheat | plastid | 17.65 | 19.54 |
| HORVU0Hr1G030830.1 | Barley | nucleus, plastid | 15.88 | 19.29 |
| KRH21925 | Soybean | nucleus | 16.47 | 19.05 |
| Bra009734.1-P | Field mustard | nucleus | 17.35 | 18.85 |
| TraesCS7D01G345700.1 | Wheat | nucleus | 16.47 | 18.79 |
| TraesCS2D01G489700.1 | Wheat | nucleus | 16.18 | 18.77 |
| Os07t0680400-01 | Rice | nucleus | 18.24 | 18.62 |
| TraesCS1D01G300300.1 | Wheat | nucleus | 16.76 | 18.57 |
| TraesCS2B01G517400.1 | Wheat | nucleus | 16.18 | 18.52 |
| Os05t0322900-01 | Rice | nucleus | 17.65 | 18.4 |
| Bra016975.1-P | Field mustard | nucleus | 15.29 | 18.31 |
| KRH64882 | Soybean | nucleus | 12.65 | 18.3 |
| Os01t0821600-01 | Rice | nucleus | 15.0 | 18.21 |
| TraesCS4B01G170100.1 | Wheat | nucleus | 16.18 | 18.21 |
| HORVU7Hr1G083270.2 | Barley | nucleus | 16.47 | 18.18 |
| HORVU4Hr1G050320.2 | Barley | nucleus | 15.88 | 18.12 |
| TraesCS4D01G172200.1 | Wheat | nucleus | 15.88 | 18.06 |
| TraesCS2A01G043600.1 | Wheat | nucleus | 14.71 | 18.05 |
| TraesCS2A01G043700.1 | Wheat | nucleus | 14.41 | 18.01 |
| Bra000202.1-P | Field mustard | nucleus | 15.88 | 18.0 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 17.65 | 17.91 |
| Os05t0478400-00 | Rice | nucleus | 18.82 | 17.88 |
| TraesCS2B01G056300.1 | Wheat | nucleus | 14.71 | 17.79 |
| HORVU2Hr1G006600.1 | Barley | nucleus | 16.76 | 17.76 |
| TraesCS3A01G343700.1 | Wheat | nucleus | 14.12 | 17.65 |
| VIT_08s0058g01390.t01 | Wine grape | nucleus | 18.53 | 17.65 |
| HORVU2Hr1G109330.1 | Barley | mitochondrion, nucleus, vacuole | 16.76 | 17.54 |
| TraesCS3D01G337500.1 | Wheat | nucleus | 13.82 | 17.41 |
| EES15768 | Sorghum | nucleus | 17.06 | 17.37 |
| KRH21927 | Soybean | nucleus | 15.29 | 17.33 |
| EES01669 | Sorghum | nucleus | 14.12 | 17.33 |
| TraesCS3B01G375700.1 | Wheat | nucleus | 13.82 | 17.28 |
| TraesCS2A01G043800.1 | Wheat | nucleus | 15.0 | 17.23 |
| TraesCS2B01G056400.1 | Wheat | nucleus, plastid | 14.41 | 17.01 |
| TraesCS3D01G337600.1 | Wheat | nucleus | 13.53 | 16.97 |
| Zm00001d047523_P001 | Maize | nucleus | 16.18 | 16.92 |
| TraesCS2A01G104900.1 | Wheat | nucleus | 16.76 | 16.91 |
| TraesCS3A01G343900.1 | Wheat | nucleus | 13.53 | 16.85 |
| Zm00001d043060_P001 | Maize | nucleus | 14.12 | 16.78 |
| HORVU3Hr1G080980.1 | Barley | nucleus | 12.06 | 16.73 |
| TraesCS3B01G375800.1 | Wheat | nucleus | 13.24 | 16.73 |
| TraesCS2D01G042700.1 | Wheat | nucleus | 14.41 | 16.72 |
| Zm00001d010617_P001 | Maize | nucleus | 15.59 | 16.72 |
| Zm00001d022437_P001 | Maize | mitochondrion, nucleus | 16.47 | 16.57 |
| TraesCS2D01G104600.1 | Wheat | nucleus | 16.18 | 16.37 |
| TraesCS2D01G104700.1 | Wheat | nucleus | 16.47 | 16.18 |
| EER94905 | Sorghum | nucleus | 15.59 | 16.16 |
| TraesCS4A01G135000.1 | Wheat | nucleus | 12.06 | 16.14 |
| EER99917 | Sorghum | mitochondrion, nucleus | 16.47 | 15.82 |
| Zm00001d023615_P001 | Maize | plastid | 17.65 | 15.75 |
| Zm00001d023616_P001 | Maize | plastid | 17.65 | 15.75 |
| Os03t0335200-01 | Rice | nucleus | 14.41 | 15.56 |
| TraesCS7A01G338500.1 | Wheat | nucleus, plastid | 16.76 | 15.53 |
| TraesCS2B01G121900.1 | Wheat | nucleus | 16.76 | 15.0 |
| HORVU2Hr1G017740.3 | Barley | nucleus | 15.29 | 14.94 |
| Zm00001d012505_P001 | Maize | nucleus | 11.18 | 14.39 |
| HORVU7Hr1G075960.1 | Barley | nucleus, plastid | 12.35 | 14.33 |
| TraesCS2A01G104800.1 | Wheat | nucleus | 14.71 | 14.29 |
| TraesCS2D01G104500.1 | Wheat | nucleus | 14.71 | 14.24 |
| HORVU2Hr1G017720.1 | Barley | nucleus, plastid | 15.29 | 14.13 |
| TraesCS2B01G121800.1 | Wheat | nucleus | 14.41 | 14.12 |
| HORVU3Hr1G081030.3 | Barley | nucleus | 13.24 | 14.06 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EnsemblPlantsGene:Bra000203 | EnsemblPlants:Bra000203.1 | EnsemblPlants:Bra000203.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M4C7M5 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF20 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI00025402E1 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
AT2G40750 (E=3e-122) WRKY54, ATWRKY54 | WRKY54; transcription factor
Coordinates
chrA03:-:9851191..9852754
Molecular Weight (calculated)
38312.9 Da
IEP (calculated)
5.214
GRAVY (calculated)
-0.830
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSDSNNTKS IKRNVVDQLV EGYESATQLQ LLLSHQQSNH HIDQTRIVSG DPDPVNELMD KILDSFHKTI SVLDSFDQVA NVSVVLEGSR NASCGDDSTP
101: ASCNGGDSGD SRKRLGVGKS KRGCYTRKKR SHTWTMEARR INEDIYAWRK YGQKQILNSK FPRSYFRCTH KPTQGCNATK QVQKHEQDPS LFQITYIGHH
201: TCNVSDETQA KTEPLDLEIV MDSDNNKLAA TISQDHVDPY IQEQGNDISS LIGVGASMVK EEDYNNGDQN KDYCEGSSTY SDLSLVWPDV MMSDDRQHHQ
301: NHFYHGEAST TTSYQFSFID NDQFSSLFDS YCPYEGTSAI
101: ASCNGGDSGD SRKRLGVGKS KRGCYTRKKR SHTWTMEARR INEDIYAWRK YGQKQILNSK FPRSYFRCTH KPTQGCNATK QVQKHEQDPS LFQITYIGHH
201: TCNVSDETQA KTEPLDLEIV MDSDNNKLAA TISQDHVDPY IQEQGNDISS LIGVGASMVK EEDYNNGDQN KDYCEGSSTY SDLSLVWPDV MMSDDRQHHQ
301: NHFYHGEAST TTSYQFSFID NDQFSSLFDS YCPYEGTSAI
001: MDSNSNNTKS IKRKVVDQLV EGYEFATQLQ LLLSHQHSNQ YHIDETRLVS GSGSVSGGPD PVDELMSKIL GSFHKTISVL DSFDPVAVSV PIAVEGSWNA
101: SCGDDSATPV SCNGGDSGES KKKRLGVGKG KRGCYTRKTR SHTRIVEAKS SEDRYAWRKY GQKEILNTTF PRSYFRCTHK PTQGCKATKQ VQKQDQDSEM
201: FQITYIGYHT CTANDQTHAK TEPFDQEIIM DSEKTLAAST AQNHVNAMVQ EQENNTSSVT AIDAGMVKEE QNNNGDQSKD YYEGSSTGED LSLVWQETMM
301: FDDHQNHYYC GETSTTSHQF GFIDNDDQFS SFFDSYCADY ERTSAM
101: SCGDDSATPV SCNGGDSGES KKKRLGVGKG KRGCYTRKTR SHTRIVEAKS SEDRYAWRKY GQKEILNTTF PRSYFRCTHK PTQGCKATKQ VQKQDQDSEM
201: FQITYIGYHT CTANDQTHAK TEPFDQEIIM DSEKTLAAST AQNHVNAMVQ EQENNTSSVT AIDAGMVKEE QNNNGDQSKD YYEGSSTGED LSLVWQETMM
301: FDDHQNHYYC GETSTTSHQF GFIDNDDQFS SFFDSYCADY ERTSAM
Arabidopsis Description
WRKY54Probable WRKY transcription factor 54 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.