Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010617_P001 | Maize | nucleus | 36.77 | 25.87 |
| Os05t0478400-00 | Rice | nucleus | 38.56 | 24.02 |
| Os03t0321700-01 | Rice | nucleus | 22.42 | 23.81 |
| Os11t0685700-00 | Rice | nucleus | 18.39 | 21.35 |
| Os12t0116400-00 | Rice | nucleus | 21.08 | 21.17 |
| Os01t0821600-01 | Rice | nucleus | 26.46 | 21.07 |
| Os11t0116900-01 | Rice | nucleus | 21.08 | 20.98 |
| Os01t0820700-00 | Rice | nucleus | 22.87 | 18.02 |
| PGSC0003DMT400070939 | Potato | nucleus | 17.94 | 17.94 |
| PGSC0003DMT400021625 | Potato | nucleus | 17.49 | 17.89 |
| Os01t0820400-01 | Rice | nucleus | 21.08 | 17.74 |
| KRH09521 | Soybean | nucleus | 19.28 | 16.23 |
| KRH40720 | Soybean | nucleus | 21.52 | 16.0 |
| Os08t0386200-01 | Rice | nucleus | 22.87 | 15.99 |
| Os07t0680400-01 | Rice | nucleus | 23.77 | 15.92 |
| KRH16921 | Soybean | nucleus | 17.04 | 15.83 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 23.77 | 15.82 |
| Solyc03g095770.2.1 | Tomato | nucleus | 19.28 | 15.75 |
| KRH00435 | Soybean | nucleus | 21.08 | 15.72 |
| CDY27218 | Canola | nucleus | 19.28 | 15.58 |
| Bra007243.1-P | Field mustard | nucleus | 19.28 | 15.58 |
| CDY32013 | Canola | nucleus | 19.73 | 15.55 |
| CDX67645 | Canola | nucleus | 19.73 | 15.55 |
| Bra003239.1-P | Field mustard | nucleus | 19.73 | 15.55 |
| Os05t0571200-01 | Rice | nucleus | 19.28 | 15.52 |
| Bra014692.1-P | Field mustard | nucleus | 19.73 | 15.44 |
| CDX75992 | Canola | nucleus | 19.73 | 15.44 |
| Os03t0335200-01 | Rice | nucleus | 21.52 | 15.24 |
| CDX72140 | Canola | nucleus | 18.83 | 15.22 |
| PGSC0003DMT400053122 | Potato | nucleus | 18.83 | 15.16 |
| CDY66845 | Canola | nucleus | 19.28 | 14.98 |
| Os09t0334500-01 | Rice | nucleus | 24.22 | 14.96 |
| Os05t0322900-01 | Rice | nucleus | 21.52 | 14.72 |
| CDY22474 | Canola | nucleus | 22.42 | 14.71 |
| Bra000203.1-P | Field mustard | nucleus | 22.42 | 14.71 |
| CDY35441 | Canola | nucleus | 22.42 | 14.71 |
| VIT_13s0067g03140.t01 | Wine grape | nucleus | 20.63 | 14.7 |
| AT3G56400.1 | Thale cress | nucleus | 19.28 | 14.63 |
| KRH64216 | Soybean | nucleus | 20.63 | 14.51 |
| KRH21928 | Soybean | nucleus | 17.49 | 14.44 |
| Solyc09g015770.2.1 | Tomato | extracellular, nucleus | 18.83 | 14.43 |
| KRH53716 | Soybean | nucleus | 20.63 | 14.42 |
| PGSC0003DMT400075091 | Potato | nucleus | 18.83 | 14.33 |
| Os01t0656400-00 | Rice | nucleus | 17.49 | 14.23 |
| CDX79972 | Canola | nucleus | 21.08 | 13.95 |
| Bra004586.1-P | Field mustard | nucleus | 21.08 | 13.86 |
| CDY23883 | Canola | nucleus | 21.08 | 13.86 |
| KRH16920 | Soybean | nucleus | 18.83 | 13.86 |
| Os06t0158100-00 | Rice | nucleus | 24.22 | 13.81 |
| KRH16918 | Soybean | nucleus | 20.18 | 13.68 |
| Bra016974.1-P | Field mustard | nucleus | 20.18 | 13.64 |
| CDY14738 | Canola | nucleus | 20.18 | 13.64 |
| CDY06967 | Canola | nucleus | 20.18 | 13.64 |
| KRH21925 | Soybean | nucleus | 17.94 | 13.61 |
| KRH21926 | Soybean | nucleus | 17.94 | 13.51 |
| Os05t0478700-00 | Rice | nucleus | 16.59 | 13.21 |
| AT2G40750.1 | Thale cress | nucleus | 19.73 | 12.72 |
| Os01t0821300-01 | Rice | cytosol, nucleus | 10.76 | 12.7 |
| KRH21927 | Soybean | nucleus | 17.04 | 12.67 |
| VIT_08s0058g01390.t01 | Wine grape | nucleus | 20.18 | 12.61 |
| KRH64882 | Soybean | nucleus | 12.56 | 11.91 |
| Os05t0321900-01 | Rice | nucleus | 21.52 | 11.21 |
| Os11t0116600-00 | Rice | nucleus | 5.38 | 6.78 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A0P0WNQ6 | ProteinID:BAS94558.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | EnsemblPlantsGene:Os05g0478800 |
| EnsemblPlants:Os05t0478800-00 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF37 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000393AED2 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
WRKY GENE 54Similar to WRKY transcription factor 48. (Os05t0478800-00)
Coordinates
chr5:-:23550611..23551282
Molecular Weight (calculated)
24203.7 Da
IEP (calculated)
4.227
GRAVY (calculated)
-0.641
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: SCRVSNAGGN GARIERKATM DDKFLWRKYG QKEIKNSKHP RFYYRCSYKD DHGCTATKQV QQSETADDDT ASPVYIITYF GEHTCRHGDD AAAMVVDGGE
101: EEDQLSPAQM VISFASSNGG DASVSWPCSG DDAQNNSETS HESSPPEAPA GEEERLRPCT AAGVSDEPIM ESTPPAPELL ADLKPMDGCL LDGESLFGMD
201: ELVYFHELSA ALGLLDRDWG APV
101: EEDQLSPAQM VISFASSNGG DASVSWPCSG DDAQNNSETS HESSPPEAPA GEEERLRPCT AAGVSDEPIM ESTPPAPELL ADLKPMDGCL LDGESLFGMD
201: ELVYFHELSA ALGLLDRDWG APV
001: MEMNSPHEKA VQAIRYGHSC AMRLKRRLNH PMADGGPLSS YDLAKSIVES FSNAISILSA KPETEDDQFS DLSSRDSSPP PQGSPSKKRK IDSTNSSENW
101: RDDSPDPIYY DGYLWRKYGQ KSIKKSNHQR SYYRCSYNKD HNCEARKHEQ KIKDNPPVYR TTYFGHHTCK TEHNLDAIFI AGQDPLDDFK STQMIRFGKD
201: QDQEKESRSN GFSLSVKHEE DIIKEQAIDQ YREITSNDQD CQDVIEEYLS SPSGSYPPSS SSGSESADFN SDLLFDNPDS WDRYDQFYF
101: RDDSPDPIYY DGYLWRKYGQ KSIKKSNHQR SYYRCSYNKD HNCEARKHEQ KIKDNPPVYR TTYFGHHTCK TEHNLDAIFI AGQDPLDDFK STQMIRFGKD
201: QDQEKESRSN GFSLSVKHEE DIIKEQAIDQ YREITSNDQD CQDVIEEYLS SPSGSYPPSS SSGSESADFN SDLLFDNPDS WDRYDQFYF
Arabidopsis Description
WRKY38Probable WRKY transcription factor 38 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWF1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.