Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • plastid 1
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G375800.1 Wheat nucleus 55.36 57.62
TraesCS3D01G337500.1 Wheat nucleus 55.36 57.41
TraesCS3B01G375700.1 Wheat nucleus 55.71 57.35
TraesCS3A01G343700.1 Wheat nucleus 55.36 56.99
TraesCS3D01G337600.1 Wheat nucleus 54.29 56.09
TraesCS3A01G343900.1 Wheat nucleus 54.64 56.04
EES01669 Sorghum nucleus 53.93 54.51
HORVU3Hr1G080980.1 Barley nucleus 46.07 52.65
Zm00001d012505_P001 Maize nucleus 48.93 51.89
Zm00001d043060_P001 Maize nucleus 52.5 51.4
HORVU3Hr1G081030.3 Barley nucleus 52.86 46.25
Os05t0478400-00 Rice nucleus 35.36 27.65
Os05t0478800-00 Rice nucleus 21.07 26.46
Os11t0685700-00 Rice nucleus 17.5 25.52
PGSC0003DMT400021625 Potato nucleus 17.86 22.94
PGSC0003DMT400070939 Potato nucleus 17.5 21.97
KRH40720 Soybean nucleus 23.21 21.67
Os08t0386200-01 Rice nucleus 24.64 21.63
KRH09521 Soybean nucleus 20.36 21.51
Os05t0322900-01 Rice nucleus 24.29 20.86
Os05t0571200-01 Rice nucleus 20.36 20.58
KRH21928 Soybean nucleus 19.64 20.37
GSMUA_Achr5P07490_001 Banana endoplasmic reticulum 24.29 20.3
KRH00435 Soybean nucleus 21.43 20.07
KRH16921 Soybean nucleus 17.14 20.0
Os01t0656400-00 Rice nucleus 19.29 19.71
PGSC0003DMT400053122 Potato nucleus 19.29 19.49
VIT_13s0067g03140.t01 Wine grape nucleus 21.79 19.49
Solyc03g095770.2.1 Tomato nucleus 18.57 19.05
Os07t0680400-01 Rice nucleus 22.5 18.92
KRH21925 Soybean nucleus 19.64 18.71
KRH21926 Soybean nucleus 19.64 18.58
Os09t0334500-01 Rice nucleus 23.93 18.56
KRH64216 Soybean nucleus 20.71 18.3
KRH53716 Soybean nucleus 20.71 18.18
KRH16918 Soybean nucleus 21.07 17.93
KRH16920 Soybean nucleus 19.29 17.82
Bra007243.1-P Field mustard nucleus 17.5 17.75
CDX72140 Canola nucleus 17.5 17.75
CDY27218 Canola nucleus 17.5 17.75
Os01t0820400-01 Rice nucleus 16.79 17.74
Os01t0820700-00 Rice nucleus 17.86 17.67
Os03t0321700-01 Rice nucleus 12.86 17.14
Os03t0335200-01 Rice nucleus 19.29 17.14
PGSC0003DMT400075091 Potato nucleus 17.86 17.06
AT3G56400.1 Thale cress nucleus 17.86 17.01
KRH21927 Soybean nucleus 18.21 17.0
Solyc09g015770.2.1 Tomato extracellular, nucleus 17.5 16.84
CDX67645 Canola nucleus 16.79 16.61
Bra003239.1-P Field mustard nucleus 16.79 16.61
CDY32013 Canola nucleus 16.43 16.25
Os12t0116400-00 Rice nucleus 12.86 16.22
Bra014692.1-P Field mustard nucleus 16.43 16.14
CDX75992 Canola nucleus 16.43 16.14
Os11t0116900-01 Rice nucleus 12.86 16.07
CDY66845 Canola nucleus 16.43 16.03
CDX79972 Canola nucleus 18.57 15.43
VIT_08s0058g01390.t01 Wine grape nucleus 19.64 15.41
CDY23883 Canola nucleus 18.57 15.34
Bra004586.1-P Field mustard nucleus 18.57 15.34
Os06t0158100-00 Rice nucleus 21.07 15.09
CDY35441 Canola nucleus 18.21 15.0
Bra000203.1-P Field mustard nucleus 18.21 15.0
CDY06967 Canola nucleus 17.5 14.85
Bra016974.1-P Field mustard nucleus 17.5 14.85
CDY22474 Canola nucleus 17.86 14.71
CDY14738 Canola nucleus 17.14 14.55
KRH64882 Soybean nucleus 12.14 14.47
Os05t0478700-00 Rice nucleus 13.93 13.93
AT2G40750.1 Thale cress nucleus 16.79 13.58
Os05t0321900-01 Rice nucleus 18.93 12.38
Os01t0821300-01 Rice cytosol, nucleus 8.21 12.17
Os11t0116600-00 Rice nucleus 2.86 4.52
Protein Annotations
MapMan:15.5.22Gene3D:2.20.25.80EntrezGene:4327611ProteinID:BAB85303.1ProteinID:BAB86484.1ProteinID:BAF06562.1
ProteinID:BAS74975.1ProteinID:DAA05086.1GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0043565InterPro:IPR003657InterPro:IPR036576EnsemblPlantsGene:Os01g0821600EnsemblPlants:Os01t0821600-01PFAM:PF03106
PFscan:PS50811PANTHER:PTHR31282PANTHER:PTHR31282:SF10UniProt:Q8RV01SMART:SM00774SUPFAM:SSF118290
UniParc:UPI00000A28D6InterPro:WRKY_domInterPro:WRKY_dom_sfRefSeq:XP_015621234.1SEG:seg:
Description
RICE WRKY GENE21WRKY transcription factor 48-like protein (WRKY transcription factor 21). (Os01t0821600-01)
Coordinates
chr1:+:35062738..35064472
Molecular Weight (calculated)
29554.5 Da
IEP (calculated)
5.439
GRAVY (calculated)
-0.223
Length
280 amino acids
Sequence
(BLAST)
001: MAMLGSSSAV VLELMTMGYQ SAAYLGELLR AASPAQAGDE QQELAAEILR CCDRVIAKLN RGGATGATTG KKRKAAESAA AAAVTSPSLP VTPTKRRARG
101: AEAVREVRSG TTTDGFIWRK YGQKEINGCK HPRLYYRCAF RGQGCLATRR VQQSQSQDDP AAAFVIAYYG EHTCGGDAAA AAACRDGELM PPAVINSGAS
201: SFAAAWNMAS REPASSLAVE RRSCDGDAPS ETSQGWSPSF SSEVELDVVG FDLAGADSSA SPVWEFLNGS FDWEFVINSL
Best Arabidopsis Sequence Match ( AT2G46400.1 )
(BLAST)
001: MMMEEKLVIN ELELGKELAN RLMNNLKHTS SVDSNKTLIS DILRIYQNAI FMLSFNQDKN ILKRSLEIDG KDSKNVFKKR KVSEKNTEKV KVFVATEQEN
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
Arabidopsis Description
WRKY46Probable WRKY transcription factor 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.