Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G337500.1 | Wheat | nucleus | 86.25 | 85.93 |
| TraesCS3B01G375700.1 | Wheat | nucleus | 86.62 | 85.66 |
| TraesCS3A01G343700.1 | Wheat | nucleus | 86.25 | 85.29 |
| HORVU3Hr1G080980.1 | Barley | nucleus | 72.12 | 79.18 |
| HORVU3Hr1G081030.3 | Barley | nucleus | 79.93 | 67.19 |
| Os01t0821600-01 | Rice | nucleus | 57.62 | 55.36 |
| EES01669 | Sorghum | nucleus | 53.53 | 51.99 |
| Zm00001d012505_P001 | Maize | nucleus | 50.93 | 51.89 |
| Zm00001d043060_P001 | Maize | nucleus | 52.42 | 49.3 |
| TraesCS2B01G056300.1 | Wheat | nucleus | 33.46 | 32.03 |
| TraesCS2B01G056400.1 | Wheat | nucleus, plastid | 31.97 | 29.86 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 26.02 | 23.89 |
| PGSC0003DMT400070939 | Potato | nucleus | 19.7 | 23.77 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 20.45 | 22.45 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 19.7 | 22.27 |
| PGSC0003DMT400021625 | Potato | nucleus | 17.84 | 22.02 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 19.7 | 21.99 |
| KRH16921 | Soybean | nucleus | 18.59 | 20.83 |
| KRH64216 | Soybean | nucleus | 24.16 | 20.5 |
| TraesCS3B01G375200.1 | Wheat | nucleus | 19.33 | 20.39 |
| KRH53716 | Soybean | nucleus | 23.79 | 20.06 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 24.91 | 19.76 |
| TraesCS7B01G249700.1 | Wheat | nucleus | 20.07 | 19.71 |
| KRH09521 | Soybean | nucleus | 19.33 | 19.62 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 18.96 | 19.54 |
| TraesCS4B01G176700.1 | Wheat | nucleus | 14.87 | 19.42 |
| KRH16920 | Soybean | nucleus | 21.56 | 19.14 |
| KRH40720 | Soybean | nucleus | 21.19 | 19.0 |
| TraesCS4B01G170100.1 | Wheat | nucleus | 21.19 | 18.87 |
| KRH00435 | Soybean | nucleus | 20.82 | 18.73 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 23.79 | 18.5 |
| TraesCS3B01G375300.1 | Wheat | nucleus | 18.22 | 18.49 |
| KRH21925 | Soybean | nucleus | 20.07 | 18.37 |
| KRH16918 | Soybean | nucleus | 22.3 | 18.24 |
| VIT_13s0067g03140.t01 | Wine grape | nucleus | 21.19 | 18.21 |
| PGSC0003DMT400053122 | Potato | nucleus | 18.59 | 18.05 |
| Solyc03g095770.2.1 | Tomato | nucleus | 17.84 | 17.58 |
| KRH21926 | Soybean | nucleus | 19.33 | 17.57 |
| KRH21928 | Soybean | nucleus | 17.47 | 17.41 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 21.56 | 17.31 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 23.79 | 17.25 |
| TraesCS2B01G517400.1 | Wheat | nucleus | 18.96 | 17.17 |
| TraesCS3B01G375600.1 | Wheat | nucleus | 20.07 | 16.77 |
| TraesCS2B01G121800.1 | Wheat | nucleus | 21.19 | 16.43 |
| Bra007243.1-P | Field mustard | nucleus | 16.73 | 16.3 |
| CDY27218 | Canola | nucleus | 16.73 | 16.3 |
| AT3G56400.1 | Thale cress | nucleus | 17.47 | 15.99 |
| CDX72140 | Canola | nucleus | 16.36 | 15.94 |
| TraesCS1B01G310900.1 | Wheat | nucleus | 16.73 | 15.73 |
| KRH21927 | Soybean | nucleus | 17.47 | 15.67 |
| Bra003239.1-P | Field mustard | nucleus | 16.36 | 15.55 |
| CDX67645 | Canola | nucleus | 16.36 | 15.55 |
| TraesCS2B01G121900.1 | Wheat | nucleus | 21.93 | 15.53 |
| TraesCS4B01G121500.1 | Wheat | nucleus | 12.64 | 15.32 |
| CDX75992 | Canola | nucleus | 15.99 | 15.09 |
| Bra014692.1-P | Field mustard | nucleus | 15.99 | 15.09 |
| PGSC0003DMT400075091 | Potato | nucleus | 16.36 | 15.02 |
| CDY66845 | Canola | nucleus | 15.99 | 14.98 |
| CDY32013 | Canola | nucleus | 15.61 | 14.84 |
| Solyc09g015770.2.1 | Tomato | extracellular, nucleus | 15.99 | 14.78 |
| TraesCS1B01G311000.1 | Wheat | nucleus | 15.61 | 14.58 |
| VIT_08s0058g01390.t01 | Wine grape | nucleus | 18.22 | 13.73 |
| CDY06967 | Canola | nucleus | 16.73 | 13.64 |
| TraesCS1B01G243100.1 | Wheat | nucleus | 17.84 | 13.37 |
| Bra016974.1-P | Field mustard | nucleus | 16.36 | 13.33 |
| CDY35441 | Canola | nucleus | 16.73 | 13.24 |
| Bra000203.1-P | Field mustard | nucleus | 16.73 | 13.24 |
| KRH64882 | Soybean | nucleus | 11.52 | 13.19 |
| CDX79972 | Canola | nucleus | 16.36 | 13.06 |
| CDY14738 | Canola | nucleus | 15.99 | 13.03 |
| CDY23883 | Canola | nucleus | 16.36 | 12.98 |
| Bra004586.1-P | Field mustard | nucleus | 16.36 | 12.98 |
| CDY22474 | Canola | nucleus | 16.36 | 12.94 |
| TraesCS6B01G108000.1 | Wheat | nucleus | 18.59 | 12.76 |
| AT2G40750.1 | Thale cress | nucleus | 14.87 | 11.56 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF10 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS3B01G375800 | EnsemblPlants:TraesCS3B01G375800.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3B:+:591364945..591366264
Molecular Weight (calculated)
29188.1 Da
IEP (calculated)
7.292
GRAVY (calculated)
-0.474
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MALATPTAVV LELMTMGQQS AAHLGDLLRA ASPPVRAEHQ ALAAEILRCC DRVIAAVSAG ASDKKRKMTD PGATTCHPPA AAMPSKRRVR GAEAHREVHA
101: DTTADGFVWR KYGQKDINGS NHPRLYYRCA FRGEGCAATR RVQRSQEEPA AFVIAYYGEH TCGAAFSQQR AEPQPPTVVD SGSNAWGVFG AVDRNRGSPL
201: MPSLAAEHDV RRHGEAPRDT SQRWSSPSSS SSYSEVELGA SPVEGFLDGN FDWEWETVVN SLRFGDLLH
101: DTTADGFVWR KYGQKDINGS NHPRLYYRCA FRGEGCAATR RVQRSQEEPA AFVIAYYGEH TCGAAFSQQR AEPQPPTVVD SGSNAWGVFG AVDRNRGSPL
201: MPSLAAEHDV RRHGEAPRDT SQRWSSPSSS SSYSEVELGA SPVEGFLDGN FDWEWETVVN SLRFGDLLH
001: MEKNHSSGEW EKMKNEINEL MIEGRDYAHQ FGSASSQETR EHLAKKILQS YHKSLTIMNY SGELDQVSQG GGSPKSDDSD QEPLVIKSSK KSMPRWSSKV
101: RIAPGAGVDR TLDDGFSWRK YGQKDILGAK FPRGYYRCTY RKSQGCEATK QVQRSDENQM LLEISYRGIH SCSQAANVGT TMPIQNLEPN QTQEHGNLDM
201: VKESVDNYNH QAHLHHNLHY PLSSTPNLEN NNAYMLQMRD QNIEYFGSTS FSSDLGTSIN YNFPASGSAS HSASNSPSTV PLESPFESYD PNHPYGGFGG
301: FYS
101: RIAPGAGVDR TLDDGFSWRK YGQKDILGAK FPRGYYRCTY RKSQGCEATK QVQRSDENQM LLEISYRGIH SCSQAANVGT TMPIQNLEPN QTQEHGNLDM
201: VKESVDNYNH QAHLHHNLHY PLSSTPNLEN NNAYMLQMRD QNIEYFGSTS FSSDLGTSIN YNFPASGSAS HSASNSPSTV PLESPFESYD PNHPYGGFGG
301: FYS
Arabidopsis Description
WRKY30Probable WRKY transcription factor 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL62]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.