Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004586.1-P | Field mustard | nucleus | 97.35 | 97.35 |
| CDX79972 | Canola | nucleus | 95.28 | 95.85 |
| CDY35441 | Canola | nucleus | 77.58 | 77.35 |
| CDY22474 | Canola | nucleus | 77.29 | 77.06 |
| CDY06967 | Canola | nucleus | 72.27 | 74.24 |
| CDY14738 | Canola | nucleus | 72.27 | 74.24 |
| AT2G40750.1 | Thale cress | nucleus | 73.16 | 71.68 |
| CDX72140 | Canola | nucleus | 42.77 | 52.54 |
| CDY27218 | Canola | nucleus | 41.89 | 51.45 |
| CDY32013 | Canola | nucleus | 42.18 | 50.53 |
| CDX75992 | Canola | nucleus | 42.48 | 50.53 |
| CDX67645 | Canola | nucleus | 41.89 | 50.18 |
| CDY66845 | Canola | nucleus | 41.59 | 49.13 |
| PGSC0003DMT400070939 | Potato | nucleus | 17.99 | 27.35 |
| PGSC0003DMT400021625 | Potato | nucleus | 17.11 | 26.61 |
| CDY13358 | Canola | nucleus | 12.09 | 26.28 |
| CDY06968 | Canola | nucleus | 11.21 | 24.52 |
| KRH16921 | Soybean | nucleus | 16.81 | 23.75 |
| KRH09521 | Soybean | nucleus | 18.29 | 23.4 |
| KRH53716 | Soybean | nucleus | 21.53 | 22.88 |
| KRH64216 | Soybean | nucleus | 21.24 | 22.71 |
| VIT_13s0067g03140.t01 | Wine grape | nucleus | 20.94 | 22.68 |
| TraesCS7B01G249700.1 | Wheat | nucleus | 17.99 | 22.26 |
| KRH40720 | Soybean | nucleus | 19.47 | 22.0 |
| KRH16918 | Soybean | nucleus | 20.94 | 21.58 |
| KRH00435 | Soybean | nucleus | 18.88 | 21.4 |
| CDX89127 | Canola | nucleus | 17.4 | 21.3 |
| TraesCS2A01G489500.1 | Wheat | nucleus | 18.29 | 21.09 |
| Os05t0478800-00 | Rice | nucleus | 13.86 | 21.08 |
| KRH16920 | Soybean | nucleus | 18.58 | 20.79 |
| TraesCS1D01G300700.1 | Wheat | nucleus | 18.58 | 20.79 |
| PGSC0003DMT400053122 | Potato | nucleus | 16.81 | 20.58 |
| Solyc03g095770.2.1 | Tomato | nucleus | 16.52 | 20.51 |
| CDX83367 | Canola | nucleus | 16.81 | 20.5 |
| CDY42043 | Canola | nucleus | 17.7 | 20.48 |
| TraesCS2D01G489700.1 | Wheat | nucleus | 17.7 | 20.48 |
| KRH21928 | Soybean | nucleus | 16.22 | 20.37 |
| HORVU0Hr1G030830.1 | Barley | nucleus, plastid | 16.81 | 20.36 |
| CDX80015 | Canola | nucleus | 17.7 | 20.27 |
| CDX95699 | Canola | nucleus | 16.81 | 20.0 |
| TraesCS1A01G301100.1 | Wheat | plastid | 17.7 | 19.8 |
| TraesCS7D01G345700.1 | Wheat | nucleus | 17.4 | 19.8 |
| CDX75991 | Canola | nucleus | 15.34 | 19.7 |
| CDY22473 | Canola | nucleus | 17.4 | 19.67 |
| KRH21926 | Soybean | nucleus | 17.11 | 19.59 |
| Solyc09g015770.2.1 | Tomato | extracellular, nucleus | 16.81 | 19.59 |
| KRH64882 | Soybean | nucleus | 13.57 | 19.57 |
| TraesCS2B01G517400.1 | Wheat | nucleus | 17.11 | 19.53 |
| HORVU7Hr1G083270.2 | Barley | nucleus | 17.7 | 19.48 |
| PGSC0003DMT400075091 | Potato | nucleus | 16.81 | 19.45 |
| CDY71829 | Canola | nucleus | 14.45 | 19.44 |
| CDY59625 | Canola | nucleus | 15.04 | 19.32 |
| CDY35442 | Canola | nucleus | 17.11 | 19.27 |
| CDX87141 | Canola | nucleus | 17.7 | 19.23 |
| CDY10969 | Canola | nucleus | 18.29 | 19.2 |
| CDY03518 | Canola | nucleus | 17.7 | 19.05 |
| KRH21925 | Soybean | nucleus | 16.52 | 19.05 |
| CDX94221 | Canola | nucleus | 17.99 | 19.0 |
| CDY19847 | Canola | nucleus | 17.4 | 18.91 |
| HORVU2Hr1G109330.1 | Barley | mitochondrion, nucleus, vacuole | 17.99 | 18.77 |
| Os05t0322900-01 | Rice | nucleus | 17.99 | 18.71 |
| CDY47621 | Canola | nucleus | 17.4 | 18.67 |
| Os01t0821600-01 | Rice | nucleus | 15.34 | 18.57 |
| TraesCS4B01G170100.1 | Wheat | nucleus | 16.22 | 18.21 |
| CDY65042 | Canola | nucleus | 17.7 | 18.18 |
| CDY25271 | Canola | nucleus | 17.7 | 18.13 |
| TraesCS4D01G172200.1 | Wheat | nucleus | 15.93 | 18.06 |
| HORVU1Hr1G069620.7 | Barley | nucleus | 15.93 | 18.0 |
| CDX80414 | Canola | nucleus | 16.52 | 17.89 |
| TraesCS1A01G300900.1 | Wheat | nucleus | 16.22 | 17.8 |
| HORVU4Hr1G050320.2 | Barley | nucleus | 15.63 | 17.79 |
| KRH21927 | Soybean | nucleus | 15.63 | 17.67 |
| VIT_08s0058g01390.t01 | Wine grape | nucleus | 18.58 | 17.65 |
| TraesCS1D01G300500.1 | Wheat | plastid | 15.93 | 17.59 |
| CDX88077 | Canola | nucleus | 16.22 | 17.57 |
| TraesCS3D01G337500.1 | Wheat | nucleus | 13.86 | 17.41 |
| EES15768 | Sorghum | nucleus | 17.11 | 17.37 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 17.11 | 17.31 |
| TraesCS3A01G343700.1 | Wheat | nucleus | 13.86 | 17.28 |
| HORVU3Hr1G080980.1 | Barley | nucleus | 12.39 | 17.14 |
| TraesCS2A01G043600.1 | Wheat | nucleus | 13.86 | 16.97 |
| TraesCS1D01G300300.1 | Wheat | nucleus | 15.34 | 16.94 |
| TraesCS2A01G043700.1 | Wheat | nucleus | 13.57 | 16.91 |
| TraesCS3B01G375700.1 | Wheat | nucleus | 13.57 | 16.91 |
| TraesCS7A01G338500.1 | Wheat | nucleus, plastid | 18.29 | 16.89 |
| Os05t0478400-00 | Rice | nucleus | 17.7 | 16.76 |
| Zm00001d047523_P001 | Maize | nucleus | 15.93 | 16.62 |
| EES01669 | Sorghum | nucleus | 13.57 | 16.61 |
| TraesCS3D01G337600.1 | Wheat | nucleus | 13.27 | 16.61 |
| TraesCS3A01G343900.1 | Wheat | nucleus | 13.27 | 16.48 |
| EER94905 | Sorghum | nucleus | 15.93 | 16.46 |
| TraesCS2B01G056300.1 | Wheat | nucleus | 13.57 | 16.37 |
| TraesCS3B01G375800.1 | Wheat | nucleus | 12.98 | 16.36 |
| Os07t0680400-01 | Rice | nucleus | 15.93 | 16.22 |
| Zm00001d010617_P001 | Maize | nucleus | 15.04 | 16.09 |
| Zm00001d043060_P001 | Maize | nucleus | 13.57 | 16.08 |
| Zm00001d023615_P001 | Maize | plastid | 17.99 | 16.01 |
| Zm00001d023616_P001 | Maize | plastid | 17.99 | 16.01 |
| Zm00001d022437_P001 | Maize | mitochondrion, nucleus | 15.93 | 15.98 |
| TraesCS2B01G056400.1 | Wheat | nucleus, plastid | 13.57 | 15.97 |
| TraesCS2A01G043800.1 | Wheat | nucleus | 13.86 | 15.88 |
| TraesCS4A01G135000.1 | Wheat | nucleus | 11.8 | 15.75 |
| TraesCS2A01G104900.1 | Wheat | nucleus | 15.63 | 15.73 |
| HORVU2Hr1G006600.1 | Barley | nucleus | 14.75 | 15.58 |
| TraesCS2D01G042700.1 | Wheat | nucleus | 13.27 | 15.36 |
| EER99917 | Sorghum | mitochondrion, nucleus | 15.93 | 15.25 |
| Os03t0335200-01 | Rice | nucleus | 14.16 | 15.24 |
| TraesCS2D01G104600.1 | Wheat | nucleus | 15.04 | 15.18 |
| TraesCS2D01G104700.1 | Wheat | nucleus | 15.04 | 14.74 |
| HORVU3Hr1G081030.3 | Barley | nucleus | 13.57 | 14.38 |
| Zm00001d012505_P001 | Maize | nucleus | 10.91 | 14.02 |
| TraesCS2A01G104800.1 | Wheat | nucleus | 14.16 | 13.71 |
| TraesCS2B01G121900.1 | Wheat | nucleus | 15.34 | 13.68 |
| TraesCS2D01G104500.1 | Wheat | nucleus | 14.16 | 13.68 |
| HORVU2Hr1G017720.1 | Barley | nucleus, plastid | 14.75 | 13.59 |
| TraesCS2B01G121800.1 | Wheat | nucleus | 13.86 | 13.54 |
| HORVU2Hr1G017740.3 | Barley | nucleus | 13.86 | 13.51 |
| HORVU7Hr1G075960.1 | Barley | nucleus, plastid | 10.91 | 12.63 |
| CDX80415 | Canola | nucleus | 5.01 | 11.49 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078GGW0 | UniProt:A0A078GGW0 | EnsemblPlants:CDY23883 | ProteinID:CDY23883 |
| ProteinID:CDY23883.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00024318001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 |
| PANTHER:PTHR32096:SF20 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE8FEC | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC04g01540DBnaC04g01540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGW0]
Coordinates
chrLK032150:+:485130..486794
Molecular Weight (calculated)
38046.0 Da
IEP (calculated)
5.972
GRAVY (calculated)
-0.749
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPNSNNTKS IKRKVVDQLV QGYEFATQLQ LLLSHQHSSQ YISQTRIVSG DLDPVDELIA KILSSFHKTI SVLDSCDSVP MAVEGSPNAS RGDDLAAPVS
101: CNGGDSGDSR KRLGVGKGKR GCYTRKKRWH TWTVEASRID EDKYAWRKYG QKEILNSKFP RSYFRCTHKQ TRGCKATKLV QKQEQDPSLF QITYIGHHTC
201: NVSDQTHTNT EPNDHGVVMD SDNALAATIA QDHVNANIQE QEQENDISSL IVVGAGMVKE EGNNNGDQNK NYCEGSSVDG DLSLVWQDVM MMFDDHQHHQ
301: NHYYQGETST ASHQFSFIDN DQLFSLFDPY CPYEGTNAI
101: CNGGDSGDSR KRLGVGKGKR GCYTRKKRWH TWTVEASRID EDKYAWRKYG QKEILNSKFP RSYFRCTHKQ TRGCKATKLV QKQEQDPSLF QITYIGHHTC
201: NVSDQTHTNT EPNDHGVVMD SDNALAATIA QDHVNANIQE QEQENDISSL IVVGAGMVKE EGNNNGDQNK NYCEGSSVDG DLSLVWQDVM MMFDDHQHHQ
301: NHYYQGETST ASHQFSFIDN DQLFSLFDPY CPYEGTNAI
001: MDSNSNNTKS IKRKVVDQLV EGYEFATQLQ LLLSHQHSNQ YHIDETRLVS GSGSVSGGPD PVDELMSKIL GSFHKTISVL DSFDPVAVSV PIAVEGSWNA
101: SCGDDSATPV SCNGGDSGES KKKRLGVGKG KRGCYTRKTR SHTRIVEAKS SEDRYAWRKY GQKEILNTTF PRSYFRCTHK PTQGCKATKQ VQKQDQDSEM
201: FQITYIGYHT CTANDQTHAK TEPFDQEIIM DSEKTLAAST AQNHVNAMVQ EQENNTSSVT AIDAGMVKEE QNNNGDQSKD YYEGSSTGED LSLVWQETMM
301: FDDHQNHYYC GETSTTSHQF GFIDNDDQFS SFFDSYCADY ERTSAM
101: SCGDDSATPV SCNGGDSGES KKKRLGVGKG KRGCYTRKTR SHTRIVEAKS SEDRYAWRKY GQKEILNTTF PRSYFRCTHK PTQGCKATKQ VQKQDQDSEM
201: FQITYIGYHT CTANDQTHAK TEPFDQEIIM DSEKTLAAST AQNHVNAMVQ EQENNTSSVT AIDAGMVKEE QNNNGDQSKD YYEGSSTGED LSLVWQETMM
301: FDDHQNHYYC GETSTTSHQF GFIDNDDQFS SFFDSYCADY ERTSAM
Arabidopsis Description
WRKY54Probable WRKY transcription factor 54 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.