Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06968 | Canola | nucleus | 55.95 | 90.97 |
| Bra016975.1-P | Field mustard | nucleus | 94.44 | 83.8 |
| CDY22473 | Canola | nucleus | 79.76 | 67.0 |
| CDY35442 | Canola | nucleus | 78.57 | 65.78 |
| AT2G40740.3 | Thale cress | nucleus | 70.24 | 58.8 |
| CDY13358 | Canola | nucleus | 27.38 | 44.23 |
| CDY59625 | Canola | nucleus | 44.05 | 42.05 |
| CDX75991 | Canola | nucleus | 42.46 | 40.53 |
| HORVU6Hr1G013890.3 | Barley | nucleus | 28.57 | 32.58 |
| Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 28.97 | 30.04 |
| GSMUA_Achr9P04830_001 | Banana | nucleus | 21.03 | 29.12 |
| KRH53718 | Soybean | nucleus | 38.1 | 29.0 |
| KRH64215 | Soybean | nucleus | 38.49 | 28.78 |
| VIT_13s0067g03130.t01 | Wine grape | nucleus | 40.08 | 27.75 |
| PGSC0003DMT400022638 | Potato | nucleus | 36.11 | 26.22 |
| GSMUA_Achr8P01730_001 | Banana | nucleus | 30.95 | 25.41 |
| OQU77713 | Sorghum | nucleus | 33.73 | 22.49 |
| GSMUA_Achr6P32460_001 | Banana | nucleus | 28.97 | 22.39 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 34.13 | 22.05 |
| TraesCS6A01G080500.1 | Wheat | nucleus | 34.13 | 21.99 |
| TraesCS6B01G108000.1 | Wheat | nucleus | 33.33 | 21.43 |
| TraesCS1B01G243100.1 | Wheat | nucleus | 30.16 | 21.17 |
| CDX83367 | Canola | nucleus | 22.62 | 20.5 |
| Os05t0321900-01 | Rice | nucleus | 34.13 | 20.09 |
| Zm00001d037854_P001 | Maize | extracellular | 32.54 | 20.05 |
| CDX95699 | Canola | nucleus | 22.62 | 20.0 |
| CDY42043 | Canola | nucleus | 21.83 | 18.77 |
| CDY03518 | Canola | nucleus | 23.41 | 18.73 |
| CDX80015 | Canola | nucleus | 21.83 | 18.58 |
| CDX89127 | Canola | nucleus | 20.24 | 18.41 |
| CDY47621 | Canola | nucleus | 23.02 | 18.35 |
| CDY10969 | Canola | nucleus | 23.41 | 18.27 |
| CDX72140 | Canola | nucleus | 19.84 | 18.12 |
| CDX94221 | Canola | nucleus | 23.02 | 18.07 |
| CDY27218 | Canola | nucleus | 19.05 | 17.39 |
| CDX80414 | Canola | nucleus | 21.03 | 16.93 |
| CDY19847 | Canola | nucleus | 20.63 | 16.67 |
| CDX87141 | Canola | nucleus | 20.63 | 16.67 |
| CDY65042 | Canola | nucleus | 21.83 | 16.67 |
| CDX88077 | Canola | nucleus | 20.63 | 16.61 |
| CDY25271 | Canola | nucleus | 21.43 | 16.31 |
| CDX67645 | Canola | nucleus | 18.25 | 16.25 |
| CDX75992 | Canola | nucleus | 18.25 | 16.14 |
| CDY66845 | Canola | nucleus | 18.25 | 16.03 |
| CDY32013 | Canola | nucleus | 17.86 | 15.9 |
| CDY06967 | Canola | nucleus | 19.05 | 14.55 |
| CDY14738 | Canola | nucleus | 19.05 | 14.55 |
| CDY23883 | Canola | nucleus | 19.44 | 14.45 |
| CDX79972 | Canola | nucleus | 19.05 | 14.24 |
| CDY35441 | Canola | nucleus | 19.05 | 14.12 |
| CDY22474 | Canola | nucleus | 18.25 | 13.53 |
| CDX80415 | Canola | nucleus | 2.78 | 4.73 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078JYS8 | UniProt:A0A078JYS8 | EnsemblPlants:CDY71829 | ProteinID:CDY71829 |
| ProteinID:CDY71829.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00020650001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 |
| PANTHER:PTHR31282:SF38 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EF1B74 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng74680DBnaCnng74680D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JYS8]
Coordinates
chrLK047703:+:3..1540
Molecular Weight (calculated)
28360.1 Da
IEP (calculated)
7.859
GRAVY (calculated)
-0.802
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: LDEITRTFGD ANERLKIVLE FRNSVVVSCS DQLLMQNEPG LMQEYWLRCG GSTSSQGTKA MTQRQIMAVE DGRRNLTPAE RSGGSSSNPS TPRQRRRKNE
101: GGEHVVLMAA LRTGNINLPP DDNHTWRKYG QKEILGSKFP RAYYRCTHQK LYNCPAKKQV QRLNDDPFTF RVTYRGSHTC HIYSTASAAA PTTPVTTSFS
201: LDYGPPFFDM ADAMMFGSSG IGANMDIYPF NDPSHHDDHC YRRSEDGDDG DK
101: GGEHVVLMAA LRTGNINLPP DDNHTWRKYG QKEILGSKFP RAYYRCTHQK LYNCPAKKQV QRLNDDPFTF RVTYRGSHTC HIYSTASAAA PTTPVTTSFS
201: LDYGPPFFDM ADAMMFGSSG IGANMDIYPF NDPSHHDDHC YRRSEDGDDG DK
001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
Arabidopsis Description
WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.