Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22473 | Canola | nucleus | 73.09 | 73.33 |
| Bra000202.1-P | Field mustard | nucleus | 71.76 | 72.0 |
| Bra016975.1-P | Field mustard | nucleus | 67.77 | 71.83 |
| CDY35442 | Canola | nucleus | 71.1 | 71.1 |
| CDY71829 | Canola | nucleus | 58.8 | 70.24 |
| CDY06968 | Canola | nucleus | 34.22 | 66.45 |
| HORVU6Hr1G013890.3 | Barley | nucleus | 27.24 | 37.1 |
| VIT_13s0067g03130.t01 | Wine grape | nucleus | 42.19 | 34.89 |
| KRH64215 | Soybean | nucleus | 38.21 | 34.12 |
| KRH53718 | Soybean | nucleus | 37.21 | 33.84 |
| Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 27.24 | 33.74 |
| PGSC0003DMT400022638 | Potato | nucleus | 36.21 | 31.41 |
| GSMUA_Achr8P01730_001 | Banana | nucleus | 31.89 | 31.27 |
| GSMUA_Achr9P04830_001 | Banana | nucleus | 17.61 | 29.12 |
| TraesCS6A01G080500.1 | Wheat | nucleus | 35.88 | 27.62 |
| OQU77713 | Sorghum | nucleus | 34.55 | 27.51 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 35.55 | 27.44 |
| GSMUA_Achr6P32460_001 | Banana | nucleus | 29.57 | 27.3 |
| TraesCS6B01G108000.1 | Wheat | nucleus | 35.22 | 27.04 |
| TraesCS1B01G243100.1 | Wheat | nucleus | 30.23 | 25.35 |
| Os05t0321900-01 | Rice | nucleus | 35.55 | 25.0 |
| Zm00001d037854_P001 | Maize | extracellular | 33.55 | 24.69 |
| AT3G56400.1 | Thale cress | nucleus | 22.59 | 23.13 |
| AT2G46400.1 | Thale cress | nucleus | 21.59 | 22.03 |
| AT4G11070.1 | Thale cress | nucleus | 22.26 | 21.41 |
| AT4G23810.1 | Thale cress | nucleus | 22.92 | 21.3 |
| AT5G24110.1 | Thale cress | nucleus | 17.94 | 17.82 |
| AT2G40750.1 | Thale cress | nucleus | 18.6 | 16.18 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:818669 | UniProt:A0A1P8AZP8 | ProteinID:ANM62125.1 | ArrayExpress:AT2G40740 |
| EnsemblPlantsGene:AT2G40740 | RefSeq:AT2G40740 | TAIR:AT2G40740 | RefSeq:AT2G40740-TAIR-G | EnsemblPlants:AT2G40740.3 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| RefSeq:NP_001324304.1 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF38 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI0008486C84 | Symbol:WRKY55 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg |
Description
WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
Coordinates
chr2:+:16997078..16999417
Molecular Weight (calculated)
33604.1 Da
IEP (calculated)
8.282
GRAVY (calculated)
-0.498
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MYVCINFKNM YSYKKISYQM EEVMSMIFHG MKLVKSLESS LPEKPPESLL TSLDEIVKTF SDANERLKML LEIKNSETAL NKTKPVIVSV ANQMLMQMEP
101: GLMQEYWLRY GGSTSSQGTE AMFQTQLMAV DGGGERNLTA AVERSGASGS STPRQRRRKD EGEEQTVLVA ALRTGNTDLP PDDNHTWRKY GQKEILGSRF
201: PRAYYRCTHQ KLYNCPAKKQ VQRLNDDPFT FRVTYRGSHT CYNSTAPTAS SATPSTIPIS SVTTGHSVDY GLAVVDMADV MFGSGGVGTN MDFIFPKNDP
301: S
101: GLMQEYWLRY GGSTSSQGTE AMFQTQLMAV DGGGERNLTA AVERSGASGS STPRQRRRKD EGEEQTVLVA ALRTGNTDLP PDDNHTWRKY GQKEILGSRF
201: PRAYYRCTHQ KLYNCPAKKQ VQRLNDDPFT FRVTYRGSHT CYNSTAPTAS SATPSTIPIS SVTTGHSVDY GLAVVDMADV MFGSGGVGTN MDFIFPKNDP
301: S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.