Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G108000.1 | Wheat | nucleus | 91.05 | 90.82 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 90.54 | 90.77 |
| HORVU6Hr1G013890.3 | Barley | nucleus | 50.13 | 88.69 |
| Os05t0321900-01 | Rice | nucleus | 57.03 | 52.1 |
| OQU77713 | Sorghum | nucleus | 49.1 | 50.79 |
| Zm00001d037854_P001 | Maize | extracellular | 51.15 | 48.9 |
| GSMUA_Achr8P01730_001 | Banana | nucleus | 35.55 | 45.28 |
| CDY06968 | Canola | nucleus | 17.14 | 43.23 |
| CDY13358 | Canola | nucleus | 15.86 | 39.74 |
| GSMUA_Achr6P32460_001 | Banana | nucleus | 30.95 | 37.12 |
| GSMUA_Achr9P04830_001 | Banana | nucleus | 17.14 | 36.81 |
| AT2G40740.3 | Thale cress | nucleus | 27.62 | 35.88 |
| Bra016975.1-P | Field mustard | nucleus | 25.06 | 34.51 |
| Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 21.23 | 34.16 |
| CDY71829 | Canola | nucleus | 21.99 | 34.13 |
| CDY22473 | Canola | nucleus | 25.32 | 33.0 |
| Bra000202.1-P | Field mustard | nucleus | 25.06 | 32.67 |
| CDY35442 | Canola | nucleus | 24.81 | 32.23 |
| KRH53718 | Soybean | nucleus | 26.6 | 31.42 |
| KRH64215 | Soybean | nucleus | 26.85 | 31.16 |
| PGSC0003DMT400022638 | Potato | nucleus | 26.85 | 30.26 |
| CDY59625 | Canola | nucleus | 19.69 | 29.17 |
| VIT_13s0067g03130.t01 | Wine grape | nucleus | 26.85 | 28.85 |
| Bra014693.1-P | Field mustard | nucleus | 19.44 | 28.79 |
| CDX75991 | Canola | nucleus | 19.44 | 28.79 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 15.6 | 24.11 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 14.58 | 23.08 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 16.88 | 22.3 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 18.93 | 21.57 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 18.93 | 21.2 |
| TraesCS4A01G128100.1 | Wheat | nucleus | 11.0 | 20.87 |
| TraesCS1A01G301100.1 | Wheat | plastid | 15.86 | 20.46 |
| TraesCS4A01G193600.1 | Wheat | nucleus | 11.51 | 20.27 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 11.76 | 19.74 |
| TraesCS2A01G104900.1 | Wheat | nucleus | 16.11 | 18.69 |
| TraesCS3A01G343900.1 | Wheat | nucleus | 13.04 | 18.68 |
| TraesCS3A01G343600.1 | Wheat | nucleus | 15.35 | 18.63 |
| TraesCS2A01G104800.1 | Wheat | nucleus | 16.62 | 18.57 |
| TraesCS1A01G301000.1 | Wheat | nucleus | 13.55 | 18.47 |
| TraesCS1A01G300900.1 | Wheat | nucleus | 14.58 | 18.45 |
| TraesCS2A01G489500.1 | Wheat | nucleus | 13.81 | 18.37 |
| TraesCS3A01G343000.1 | Wheat | nucleus | 12.02 | 18.08 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 17.39 | 18.04 |
| TraesCS3A01G343700.1 | Wheat | nucleus | 12.53 | 18.01 |
| TraesCS3A01G343100.1 | Wheat | nucleus | 12.02 | 17.74 |
| TraesCS4A01G135000.1 | Wheat | nucleus | 11.51 | 17.72 |
| TraesCS2A01G043700.1 | Wheat | nucleus | 12.02 | 17.28 |
| TraesCS2A01G043600.1 | Wheat | nucleus | 12.02 | 16.97 |
| TraesCS1A01G301200.1 | Wheat | nucleus | 12.53 | 16.9 |
| TraesCS7A01G338500.1 | Wheat | nucleus, plastid | 15.6 | 16.62 |
| TraesCS2A01G497400.1 | Wheat | nucleus | 14.58 | 15.83 |
| TraesCS2A01G043800.1 | Wheat | nucleus | 11.25 | 14.86 |
| TraesCS3A01G343500.1 | Wheat | nucleus | 13.3 | 14.48 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF38 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS6A01G080500 | EnsemblPlants:TraesCS6A01G080500.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6A:-:49149239..49151859
Molecular Weight (calculated)
41149.5 Da
IEP (calculated)
8.235
GRAVY (calculated)
-0.334
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MHVLAPHSRG PPFAPLLGYL DRRGREGIAI HGGDLPGGMD DVLSQIGDAF RLAGELMGDL PAAQNDPAYL AARCHGIVRA YNTAIRLLQN YGVGAVNVAA
101: AARPLDGGGP LDLLRLRSTE EAAGASQLLG ETPTHLLEPF HMPAGARAPA HAVRAAADVA GTSGGPVRRL APSRSPPTAQ PRQGRRRRDS GQRETISVPA
201: HRMGNIELPP DDGYTWRKYG QKDILGSRFP RSYYRCTHKN YYGCDAKKKV QRLDDDPFMY EVTYCGSHSC LTSTTPLLNF PTATATATAT NSPTAATGSG
301: LAPADHFMAP TEQAAVSTSM HLGVGWMPAS FQGVVAGSGA GGGSSAGMQT SVSTAARDTD YPALDLADVM FNSGGSVGMD GIFSSHHRRD S
101: AARPLDGGGP LDLLRLRSTE EAAGASQLLG ETPTHLLEPF HMPAGARAPA HAVRAAADVA GTSGGPVRRL APSRSPPTAQ PRQGRRRRDS GQRETISVPA
201: HRMGNIELPP DDGYTWRKYG QKDILGSRFP RSYYRCTHKN YYGCDAKKKV QRLDDDPFMY EVTYCGSHSC LTSTTPLLNF PTATATATAT NSPTAATGSG
301: LAPADHFMAP TEQAAVSTSM HLGVGWMPAS FQGVVAGSGA GGGSSAGMQT SVSTAARDTD YPALDLADVM FNSGGSVGMD GIFSSHHRRD S
001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
Arabidopsis Description
WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.