Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G110600.1 | Wheat | nucleus | 90.72 | 92.93 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 89.92 | 91.37 |
| Os06t0158100-00 | Rice | nucleus | 55.7 | 53.71 |
| EER87882 | Sorghum | nucleus | 48.01 | 47.88 |
| Zm00001d045283_P001 | Maize | nucleus | 48.54 | 46.21 |
| Zm00001d036244_P001 | Maize | nucleus | 44.3 | 45.63 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 28.38 | 33.13 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 25.73 | 31.29 |
| CDY03518 | Canola | nucleus | 25.73 | 30.79 |
| AT4G23810.1 | Thale cress | nucleus | 26.26 | 30.56 |
| CDX94221 | Canola | nucleus | 25.99 | 30.53 |
| Bra013732.1-P | Field mustard | nucleus | 25.2 | 30.06 |
| Bra019265.1-P | Field mustard | nucleus | 25.73 | 30.03 |
| CDY47621 | Canola | nucleus | 24.93 | 29.75 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 19.36 | 29.55 |
| CDY10969 | Canola | nucleus | 25.2 | 29.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.55 | 28.81 |
| KRH68901 | Soybean | nucleus | 27.59 | 28.73 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 22.28 | 28.38 |
| KRH77637 | Soybean | nucleus | 24.14 | 28.26 |
| KRG97154 | Soybean | nucleus | 27.06 | 28.18 |
| CDX88077 | Canola | nucleus | 23.34 | 28.11 |
| CDX80414 | Canola | nucleus | 23.34 | 28.11 |
| Bra009734.1-P | Field mustard | nucleus | 23.34 | 28.11 |
| Solyc08g082110.2.1 | Tomato | nucleus | 25.2 | 28.02 |
| KRH64503 | Soybean | nucleus | 27.06 | 28.02 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 27.06 | 28.02 |
| CDX87141 | Canola | nucleus | 23.08 | 27.88 |
| Bra026467.1-P | Field mustard | nucleus | 23.08 | 27.88 |
| CDY65042 | Canola | nucleus | 24.4 | 27.88 |
| AT4G11070.1 | Thale cress | nucleus | 23.08 | 27.8 |
| KRH53440 | Soybean | nucleus | 26.79 | 27.75 |
| PGSC0003DMT400031695 | Potato | nucleus | 24.93 | 27.73 |
| CDY19847 | Canola | nucleus | 22.55 | 27.24 |
| PGSC0003DMT400014949 | Potato | nucleus | 25.99 | 27.22 |
| CDY25271 | Canola | nucleus | 23.87 | 27.19 |
| Bra033158.1-P | Field mustard | nucleus | 23.87 | 27.19 |
| AT5G24110.1 | Thale cress | nucleus | 21.75 | 27.06 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 24.4 | 26.9 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 18.04 | 26.88 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 24.14 | 26.53 |
| Solyc08g008280.2.1 | Tomato | nucleus | 25.2 | 26.39 |
| Bra004540.1-P | Field mustard | nucleus | 19.89 | 26.32 |
| CDY42043 | Canola | nucleus | 20.42 | 26.28 |
| Solyc10g009550.2.1 | Tomato | nucleus | 20.16 | 26.21 |
| CDX80015 | Canola | nucleus | 20.42 | 26.01 |
| CDX89127 | Canola | nucleus | 19.1 | 25.99 |
| Bra014426.1-P | Field mustard | nucleus | 19.1 | 25.99 |
| AT2G46400.1 | Thale cress | nucleus | 20.16 | 25.76 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 15.92 | 25.75 |
| PGSC0003DMT400051194 | Potato | nucleus | 19.63 | 25.52 |
| KRH47935 | Soybean | nucleus | 24.93 | 25.47 |
| Bra000423.1-P | Field mustard | nucleus | 18.83 | 25.27 |
| KRH06499 | Soybean | nucleus | 24.93 | 25.2 |
| Solyc05g050300.1.1 | Tomato | nucleus | 13.0 | 25.13 |
| KRH60029 | Soybean | nucleus | 23.87 | 24.79 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 22.81 | 24.64 |
| PGSC0003DMT400000599 | Potato | nucleus | 22.55 | 24.57 |
| CDX95699 | Canola | nucleus | 18.57 | 24.56 |
| CDX83367 | Canola | nucleus | 18.04 | 24.46 |
| Solyc01g095630.2.1 | Tomato | nucleus | 21.49 | 24.11 |
| KRH41300 | Soybean | nucleus | 22.81 | 23.96 |
| Solyc03g007380.1.1 | Tomato | nucleus | 22.02 | 23.51 |
| TraesCS2A01G489500.1 | Wheat | nucleus | 18.3 | 23.47 |
| PGSC0003DMT400023502 | Potato | nucleus | 22.02 | 23.31 |
| TraesCS3A01G343700.1 | Wheat | nucleus | 16.71 | 23.16 |
| TraesCS3A01G343900.1 | Wheat | nucleus | 16.71 | 23.08 |
| PGSC0003DMT400046351 | Potato | nucleus | 17.51 | 21.93 |
| TraesCS1A01G301100.1 | Wheat | plastid | 17.51 | 21.78 |
| TraesCS1A01G300900.1 | Wheat | nucleus | 17.77 | 21.68 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 19.89 | 21.49 |
| TraesCS4A01G128100.1 | Wheat | nucleus | 11.67 | 21.36 |
| TraesCS2A01G043700.1 | Wheat | nucleus | 15.38 | 21.32 |
| TraesCS2A01G043600.1 | Wheat | nucleus | 15.65 | 21.3 |
| TraesCS3A01G343100.1 | Wheat | nucleus | 14.85 | 21.13 |
| Solyc05g050330.2.1 | Tomato | nucleus | 13.53 | 20.9 |
| TraesCS4A01G193600.1 | Wheat | nucleus | 12.2 | 20.72 |
| TraesCS3A01G343000.1 | Wheat | nucleus | 14.06 | 20.38 |
| PGSC0003DMT400084227 | Potato | nucleus | 15.38 | 19.73 |
| TraesCS4A01G135000.1 | Wheat | nucleus | 13.26 | 19.68 |
| TraesCS2A01G043800.1 | Wheat | nucleus | 15.38 | 19.59 |
| TraesCS3A01G343600.1 | Wheat | nucleus | 16.45 | 19.25 |
| TraesCS7A01G338500.1 | Wheat | nucleus, plastid | 18.57 | 19.07 |
| PGSC0003DMT400084214 | Potato | nucleus | 16.18 | 18.43 |
| TraesCS2A01G104800.1 | Wheat | nucleus | 16.71 | 18.0 |
| TraesCS2A01G104900.1 | Wheat | nucleus | 15.92 | 17.8 |
| TraesCS1A01G301000.1 | Wheat | nucleus | 13.53 | 17.77 |
| Solyc05g050340.2.1 | Tomato | nucleus | 15.38 | 17.74 |
| TraesCS6A01G080500.1 | Wheat | nucleus | 18.04 | 17.39 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 2.65 | 16.95 |
| TraesCS1A01G301200.1 | Wheat | nucleus | 12.73 | 16.55 |
| TraesCS2A01G497400.1 | Wheat | nucleus | 13.53 | 14.17 |
| TraesCS3A01G343500.1 | Wheat | nucleus | 13.26 | 13.93 |
| CDX80415 | Canola | nucleus | 5.31 | 13.51 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR32096 | PANTHER:PTHR32096:SF24 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS7A01G116000 | EnsemblPlants:TraesCS7A01G116000.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7A:+:74158259..74160811
Molecular Weight (calculated)
39716.0 Da
IEP (calculated)
6.368
GRAVY (calculated)
-0.507
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDGAGGGGG DGNSMHLLLS ILADGEEQAR RLLGELPPAD DEGQLLGRGP AAECCRGVAR QLLCTFRKAI AVAKAIEAAG GDSPRSADEG AGAGRDAAQA
101: QERQGQGVCK RRKGLPRWTE KFRIPDDANL EYTPDDGFSW RKYGQKDILG AKFPRGYYRC TYRNAQGCAA TRQVQRSDAD LAVFDVTYQG AHTCLQAQRR
201: SAAPPPPPAA VAAHDVQRSP PALPDPDMQL LENFRNGLKV ETDGLPPPPP PFHGHGTTAF SFAYAAAGAA GYSPAESGGQ RLLQGGGCFA PASFSSPAAT
301: TSAGPGYFAV SAAHCTLGTH DSPELAEVVS AATASDPAGF DYSLYQYHGL QQHDQYAHLL PFPFDPPSSS HGQHRDA
101: QERQGQGVCK RRKGLPRWTE KFRIPDDANL EYTPDDGFSW RKYGQKDILG AKFPRGYYRC TYRNAQGCAA TRQVQRSDAD LAVFDVTYQG AHTCLQAQRR
201: SAAPPPPPAA VAAHDVQRSP PALPDPDMQL LENFRNGLKV ETDGLPPPPP PFHGHGTTAF SFAYAAAGAA GYSPAESGGQ RLLQGGGCFA PASFSSPAAT
301: TSAGPGYFAV SAAHCTLGTH DSPELAEVVS AATASDPAGF DYSLYQYHGL QQHDQYAHLL PFPFDPPSSS HGQHRDA
001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
Arabidopsis Description
WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.