Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G183800.1 | Wheat | nucleus | 92.55 | 93.35 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 92.55 | 92.02 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 87.97 | 78.32 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 67.91 | 69.1 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 38.4 | 45.27 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 28.37 | 39.76 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 31.81 | 34.37 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 32.09 | 33.73 |
| Solyc08g082110.2.1 | Tomato | nucleus | 31.23 | 32.15 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 22.64 | 31.98 |
| PGSC0003DMT400031695 | Potato | nucleus | 30.95 | 31.86 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 32.95 | 31.59 |
| KRH77637 | Soybean | nucleus | 28.94 | 31.37 |
| PGSC0003DMT400051194 | Potato | nucleus | 25.79 | 31.03 |
| Solyc10g009550.2.1 | Tomato | nucleus | 25.79 | 31.03 |
| KRH64503 | Soybean | nucleus | 31.81 | 30.49 |
| KRH53440 | Soybean | nucleus | 31.81 | 30.49 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 22.06 | 30.43 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 29.8 | 30.41 |
| KRH68901 | Soybean | nucleus | 31.52 | 30.39 |
| AT2G46400.1 | Thale cress | nucleus | 25.5 | 30.17 |
| Bra000423.1-P | Field mustard | nucleus | 24.07 | 29.89 |
| KRH41300 | Soybean | nucleus | 30.66 | 29.8 |
| Bra019265.1-P | Field mustard | nucleus | 27.51 | 29.72 |
| AT4G11070.1 | Thale cress | nucleus | 26.65 | 29.71 |
| CDY65042 | Canola | nucleus | 28.08 | 29.7 |
| KRG97154 | Soybean | nucleus | 30.66 | 29.56 |
| CDY03518 | Canola | nucleus | 26.65 | 29.52 |
| AT4G23810.1 | Thale cress | nucleus | 27.22 | 29.32 |
| CDX94221 | Canola | nucleus | 26.93 | 29.28 |
| KRH06499 | Soybean | nucleus | 31.23 | 29.22 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 19.48 | 29.18 |
| CDY10969 | Canola | nucleus | 26.93 | 29.1 |
| PGSC0003DMT400014949 | Potato | nucleus | 29.8 | 28.89 |
| CDY47621 | Canola | nucleus | 26.07 | 28.8 |
| Bra013732.1-P | Field mustard | nucleus | 26.07 | 28.8 |
| CDX83367 | Canola | nucleus | 22.92 | 28.78 |
| CDX95699 | Canola | nucleus | 23.5 | 28.77 |
| KRH47935 | Soybean | nucleus | 30.37 | 28.73 |
| Bra033158.1-P | Field mustard | nucleus | 27.22 | 28.7 |
| CDY25271 | Canola | nucleus | 27.22 | 28.7 |
| Bra004540.1-P | Field mustard | nucleus | 23.21 | 28.42 |
| Bra014426.1-P | Field mustard | nucleus | 22.35 | 28.16 |
| CDX89127 | Canola | nucleus | 22.35 | 28.16 |
| KRH60029 | Soybean | nucleus | 29.23 | 28.1 |
| Solyc08g008280.2.1 | Tomato | nucleus | 28.94 | 28.06 |
| PGSC0003DMT400000599 | Potato | nucleus | 27.79 | 28.03 |
| CDY42043 | Canola | nucleus | 23.5 | 27.99 |
| CDX80015 | Canola | nucleus | 23.5 | 27.7 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 4.58 | 27.12 |
| Solyc01g095630.2.1 | Tomato | nucleus | 26.07 | 27.08 |
| CDX80414 | Canola | nucleus | 24.07 | 26.84 |
| AT5G24110.1 | Thale cress | nucleus | 22.92 | 26.4 |
| CDX87141 | Canola | nucleus | 23.5 | 26.28 |
| Bra026467.1-P | Field mustard | nucleus | 23.21 | 25.96 |
| CDX88077 | Canola | nucleus | 23.21 | 25.88 |
| Bra009734.1-P | Field mustard | nucleus | 23.21 | 25.88 |
| PGSC0003DMT400023502 | Potato | nucleus | 26.36 | 25.84 |
| Solyc03g007380.1.1 | Tomato | nucleus | 26.07 | 25.78 |
| CDY19847 | Canola | nucleus | 22.92 | 25.64 |
| TraesCS2A01G489500.1 | Wheat | nucleus | 20.63 | 24.49 |
| TraesCS1A01G300900.1 | Wheat | nucleus | 21.49 | 24.27 |
| Solyc05g050300.1.1 | Tomato | nucleus | 13.47 | 24.1 |
| TraesCS4A01G128100.1 | Wheat | nucleus | 14.04 | 23.79 |
| PGSC0003DMT400084227 | Potato | nucleus | 19.77 | 23.47 |
| Solyc05g050330.2.1 | Tomato | nucleus | 16.33 | 23.36 |
| TraesCS1A01G301100.1 | Wheat | plastid | 20.06 | 23.1 |
| TraesCS3A01G343900.1 | Wheat | nucleus | 18.05 | 23.08 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 24.64 | 22.81 |
| TraesCS3A01G343000.1 | Wheat | nucleus | 16.91 | 22.69 |
| TraesCS3A01G343100.1 | Wheat | nucleus | 17.19 | 22.64 |
| PGSC0003DMT400046351 | Potato | nucleus | 19.48 | 22.59 |
| TraesCS4A01G193600.1 | Wheat | nucleus | 14.04 | 22.07 |
| TraesCS3A01G343700.1 | Wheat | nucleus | 17.19 | 22.06 |
| PGSC0003DMT400084214 | Potato | nucleus | 20.34 | 21.45 |
| Solyc05g050340.2.1 | Tomato | nucleus | 19.48 | 20.8 |
| TraesCS2A01G043700.1 | Wheat | nucleus | 16.05 | 20.59 |
| TraesCS2A01G043600.1 | Wheat | nucleus | 16.33 | 20.58 |
| TraesCS2A01G104900.1 | Wheat | nucleus | 19.48 | 20.18 |
| TraesCS7A01G338500.1 | Wheat | nucleus, plastid | 21.2 | 20.16 |
| TraesCS4A01G135000.1 | Wheat | nucleus | 14.61 | 20.08 |
| TraesCS1A01G301000.1 | Wheat | nucleus | 16.05 | 19.51 |
| TraesCS1A01G301200.1 | Wheat | nucleus | 15.76 | 18.97 |
| TraesCS6A01G080500.1 | Wheat | nucleus | 21.2 | 18.93 |
| CDX80415 | Canola | nucleus | 8.02 | 18.92 |
| TraesCS2A01G043800.1 | Wheat | nucleus | 15.76 | 18.58 |
| TraesCS3A01G343600.1 | Wheat | nucleus | 16.91 | 18.32 |
| TraesCS2A01G104800.1 | Wheat | nucleus | 18.05 | 18.0 |
| TraesCS3A01G343500.1 | Wheat | nucleus | 18.05 | 17.55 |
| TraesCS2A01G497400.1 | Wheat | nucleus | 17.19 | 16.67 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR32096 | PANTHER:PTHR32096:SF33 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS5A01G185700 | EnsemblPlants:TraesCS5A01G185700.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5A:+:386162199..386164441
Molecular Weight (calculated)
36981.1 Da
IEP (calculated)
5.723
GRAVY (calculated)
-0.392
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAVHEGNGG GSGLVVTELS HIKELVKQLD VHLGGSPDLC KLLAQQIFAV TERSIGMIRS GHFNGPKRSA AGAGLDSPPL SATPSPLSGV SNTPFKPNKK
101: RKTSEKGGRQ IRVSSAGEGA DAPVDDGRSW RKYGQKEILG AQHPRAYYRC TYQKTQGCAA TKQVQRADDD PALFDVIYHG EHTCVHKTAA AAAGMVQPAG
201: KNPDAESLLQ SLSSNLTVKT EGLTAAGAQG WSATTPFSFS SPAVSGMTPP EQQHHPFSTP STPENCFVSM PTSLEPSPAT SGSNHMCMTP FHAQSELQTM
301: VSALVEATSM PPADTEEAAF SYWGFDDSAL DVNILDEDVD NFDISAFFA
101: RKTSEKGGRQ IRVSSAGEGA DAPVDDGRSW RKYGQKEILG AQHPRAYYRC TYQKTQGCAA TKQVQRADDD PALFDVIYHG EHTCVHKTAA AAAGMVQPAG
201: KNPDAESLLQ SLSSNLTVKT EGLTAAGAQG WSATTPFSFS SPAVSGMTPP EQQHHPFSTP STPENCFVSM PTSLEPSPAT SGSNHMCMTP FHAQSELQTM
301: VSALVEATSM PPADTEEAAF SYWGFDDSAL DVNILDEDVD NFDISAFFA
001: MMMEEKLVIN ELELGKELAN RLMNNLKHTS SVDSNKTLIS DILRIYQNAI FMLSFNQDKN ILKRSLEIDG KDSKNVFKKR KVSEKNTEKV KVFVATEQEN
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
Arabidopsis Description
WRKY46Probable WRKY transcription factor 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.