Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400023502 | Potato | nucleus | 90.37 | 89.61 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 42.21 | 40.93 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 23.51 | 33.33 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 33.43 | 32.78 |
| Solyc08g082110.2.1 | Tomato | nucleus | 31.44 | 32.74 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 22.66 | 32.39 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 22.38 | 32.38 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 30.31 | 32.23 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 26.63 | 32.08 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 26.63 | 32.08 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 22.38 | 31.98 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 26.06 | 31.62 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 21.81 | 31.56 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 26.35 | 31.42 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 21.53 | 31.41 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 21.25 | 31.12 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 20.96 | 31.09 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 22.1 | 30.71 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 26.91 | 30.65 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 29.46 | 30.59 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.5 | 30.51 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 21.25 | 30.36 |
| Solyc10g009550.2.1 | Tomato | nucleus | 24.65 | 30.0 |
| Os05t0571200-01 | Rice | nucleus | 23.51 | 29.96 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 21.53 | 29.8 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 20.68 | 29.67 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 25.78 | 29.55 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 20.96 | 29.25 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 21.53 | 29.23 |
| Solyc01g095630.2.1 | Tomato | nucleus | 27.76 | 29.17 |
| Zm00001d020136_P001 | Maize | nucleus | 24.93 | 29.14 |
| Solyc08g008280.2.1 | Tomato | nucleus | 29.46 | 28.89 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 21.25 | 28.74 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 19.83 | 28.57 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 20.4 | 28.46 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 26.63 | 28.31 |
| EES18716 | Sorghum | nucleus | 21.81 | 28.31 |
| Os01t0656400-00 | Rice | nucleus | 21.81 | 28.1 |
| EER96589 | Sorghum | nucleus | 24.65 | 28.06 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 26.91 | 28.02 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 27.2 | 27.99 |
| Os08t0386200-01 | Rice | nucleus | 25.21 | 27.9 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 18.41 | 27.9 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 26.91 | 27.86 |
| Zm00001d050247_P001 | Maize | nucleus | 25.21 | 27.81 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 26.91 | 27.46 |
| Os11t0685700-00 | Rice | nucleus | 14.73 | 27.08 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 26.91 | 27.07 |
| Solyc05g050330.2.1 | Tomato | nucleus | 18.7 | 27.05 |
| Zm00001d032265_P001 | Maize | nucleus | 25.5 | 27.03 |
| EER96590 | Sorghum | nucleus | 24.93 | 26.83 |
| Zm00001d005622_P001 | Maize | nucleus | 24.93 | 26.59 |
| OQU80381 | Sorghum | nucleus | 25.5 | 26.47 |
| Zm00001d020137_P001 | Maize | nucleus | 24.08 | 26.23 |
| Solyc05g050300.1.1 | Tomato | nucleus | 14.45 | 26.15 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 25.78 | 26.07 |
| Os09t0334500-01 | Rice | nucleus | 26.35 | 25.76 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 22.38 | 25.48 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 4.25 | 25.42 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 17.56 | 24.9 |
| Zm00001d011496_P002 | Maize | nucleus | 22.95 | 24.77 |
| EES03370 | Sorghum | nucleus | 24.08 | 24.57 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 22.38 | 24.46 |
| Os06t0158100-00 | Rice | nucleus | 26.91 | 24.3 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 26.63 | 23.98 |
| Zm00001d009619_P002 | Maize | nucleus | 20.11 | 23.91 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 23.51 | 23.78 |
| Zm00001d044010_P001 | Maize | nucleus | 21.81 | 22.99 |
| Solyc05g050340.2.1 | Tomato | nucleus | 21.25 | 22.94 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 23.8 | 22.83 |
| EER87882 | Sorghum | nucleus | 24.36 | 22.75 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 23.8 | 22.64 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 21.25 | 22.59 |
| Zm00001d045283_P001 | Maize | nucleus | 24.93 | 22.22 |
| Zm00001d036244_P001 | Maize | nucleus | 22.95 | 22.13 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 23.51 | 22.02 |
| Solyc03g095770.2.1 | Tomato | nucleus | 16.15 | 20.88 |
| Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 13.6 | 19.75 |
| Solyc09g015770.2.1 | Tomato | extracellular, nucleus | 15.01 | 18.21 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:K4BEG1 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR32096 | PANTHER:PTHR32096:SF20 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:Solyc03g007380.1 | EnsemblPlants:Solyc03g007380.1.1 |
| UniParc:UPI0002768142 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3:+:1929376..1930601
Molecular Weight (calculated)
40064.9 Da
IEP (calculated)
6.563
GRAVY (calculated)
-0.975
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNYGADNNS HEINRLVSHE LTQGRDLVQQ LQLHLNAPNS SSSSENTREF LLHNIQFKFD RALSLLQCNT INGDNSNSSL PRSNSPAIPI IGMSDSPRSS
101: EDSDRDLEPK EHHATRKRKS STPRWTKQVQ IQPGAPIEGT LDDGYSWRKY GQKDILGAKH PRGYYRCTLR HVQGCLATKQ VQRSDEDPNI FEVTYRGRHT
201: CNQGGGASVS NVNPAPPPLP LPLVIHQIQE PNIGNHEQYQ QLNQNPNEIL LNFQKSLSIS KDDFNFKNTH HDQPNNVPYI PSFNNYPSSS SNDHQDYNFL
301: NNSSTIPNNI FVESFPPSFN NMSTGTSQQN EADYQFNSMG FESNFPYDYH RFS
101: EDSDRDLEPK EHHATRKRKS STPRWTKQVQ IQPGAPIEGT LDDGYSWRKY GQKDILGAKH PRGYYRCTLR HVQGCLATKQ VQRSDEDPNI FEVTYRGRHT
201: CNQGGGASVS NVNPAPPPLP LPLVIHQIQE PNIGNHEQYQ QLNQNPNEIL LNFQKSLSIS KDDFNFKNTH HDQPNNVPYI PSFNNYPSSS SNDHQDYNFL
301: NNSSTIPNNI FVESFPPSFN NMSTGTSQQN EADYQFNSMG FESNFPYDYH RFS
001: MEMMNWERRS LLNELIHGLK AAKQLQGSSS PSLSASSSYL TTEIKENLLH NIVSSFKKAI LMLNGSTTQH NPTIELAPDP LAHPGKVPGS PASITGNPRS
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI
Arabidopsis Description
WRKY41Probable WRKY transcription factor 41 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.