Factsheet for HORVU1Hr1G090110.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G006660.1
HORVU4Hr1G026290.3
HORVU4Hr1G061550.1
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4
HORVU6Hr1G079810.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23810.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT4G23810.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT4G23810.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT4G23810.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT4G23810.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT4G23810.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT4G23810.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT4G23810.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT4G23810.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT4G23810.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT4G23810.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT4G23810.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT4G23810.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT4G23810.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT4G23810.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT4G23810.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592
AT4G23810.1	HORVU4Hr1G006660.1	AT4G08500.1	17587183
AT4G23810.1	HORVU4Hr1G061550.1	AT4G08500.1	17587183
AT4G23810.1	HORVU6Hr1G079810.1	AT4G08500.1	17587183
AT4G23810.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT4G23810.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT4G23810.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT4G23810.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT4G23810.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT4G23810.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT4G23810.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT4G23810.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G440300.1	Wheat	nucleus	81.82	84.49
TraesCS1D01G418000.1	Wheat	nucleus	81.03	83.33
TraesCS1A01G410500.1	Wheat	nucleus	81.82	81.82
HORVU1Hr1G090130.4	Barley	nucleus	80.24	78.08
HORVU1Hr1G090170.1	Barley	nucleus	69.96	71.66
HORVU1Hr1G090190.2	Barley	nucleus	71.94	71.65
Os05t0571200-01	Rice	nucleus	54.15	49.46
EES18716	Sorghum	nucleus	45.85	42.65
Zm00001d009619_P002	Maize	nucleus	46.64	39.73
HORVU3Hr1G059210.1	Barley	nucleus	36.76	38.11
HORVU3Hr1G059220.1	Barley	nucleus	43.48	35.71
HORVU4Hr1G051970.1	Barley	nucleus	13.83	28.0
GSMUA_Achr3P15840_001	Banana	nucleus	26.09	26.51
GSMUA_Achr3P25080_001	Banana	nucleus	33.99	25.9
HORVU2Hr1G029430.2	Barley	mitochondrion, nucleus	24.9	25.82
VIT_15s0046g01140.t01	Wine grape	nucleus	32.41	25.39
CDY03518	Canola	nucleus	29.64	23.81
HORVU5Hr1G034830.3	Barley	nucleus	31.23	23.8
CDY47621	Canola	nucleus	29.64	23.73
Bra013732.1-P	Field mustard	nucleus	29.64	23.73
Bra019265.1-P	Field mustard	nucleus	29.64	23.22
AT4G23810.1	Thale cress	nucleus	29.64	23.15
CDX94221	Canola	nucleus	29.25	23.05
CDY10969	Canola	nucleus	29.25	22.91
KRH77637	Soybean	nucleus	28.85	22.67
HORVU0Hr1G012740.1	Barley	nucleus	28.85	22.6
Solyc10g009550.2.1	Tomato	nucleus	25.69	22.41
AT4G11070.1	Thale cress	nucleus	27.67	22.36
CDX83367	Canola	nucleus	24.51	22.3
KRH41300	Soybean	nucleus	31.62	22.28
VIT_16s0050g02510.t01	Wine grape	nucleus	32.02	22.25
PGSC0003DMT400051194	Potato	nucleus	25.3	22.07
Bra000423.1-P	Field mustard	nucleus	24.51	22.06
KRH60029	Soybean	nucleus	31.62	22.04
Solyc08g082110.2.1	Tomato	nucleus	29.25	21.83
CDX87141	Canola	nucleus	26.88	21.79
Solyc05g050330.2.1	Tomato	nucleus	20.95	21.72
HORVU6Hr1G013890.3	Barley	nucleus	18.97	21.72
AT2G46400.1	Thale cress	nucleus	25.3	21.69
HORVU3Hr1G058670.1	Barley	nucleus	21.34	21.69
VIT_02s0025g01280.t01	Wine grape	nucleus	29.25	21.64
CDY65042	Canola	nucleus	28.06	21.52
Bra026467.1-P	Field mustard	nucleus	26.48	21.47
AT5G24110.1	Thale cress	nucleus	25.69	21.45
Bra033158.1-P	Field mustard	nucleus	28.06	21.45
CDY25271	Canola	nucleus	28.06	21.45
Bra004540.1-P	Field mustard	nucleus	24.11	21.4
PGSC0003DMT400031695	Potato	nucleus	28.46	21.24
CDY42043	Canola	nucleus	24.51	21.16
CDY19847	Canola	nucleus	26.09	21.15
CDX80414	Canola	nucleus	26.09	21.09
CDX95699	Canola	nucleus	23.72	21.05
KRH68901	Soybean	nucleus	30.04	20.99
CDX80015	Canola	nucleus	24.51	20.95
HORVU5Hr1G056130.2	Barley	nucleus	32.41	20.92
HORVU3Hr1G080980.1	Barley	nucleus	20.16	20.82
Bra009734.1-P	Field mustard	nucleus	25.69	20.77
CDX88077	Canola	nucleus	25.69	20.77
Solyc05g050300.1.1	Tomato	nucleus	15.81	20.51
KRG97154	Soybean	nucleus	29.25	20.44
Solyc03g007380.1.1	Tomato	nucleus	28.46	20.4
HORVU4Hr1G052010.2	Barley	nucleus	16.6	20.39
Solyc01g095630.2.1	Tomato	nucleus	26.88	20.24
KRH06499	Soybean	nucleus	29.64	20.11
KRH53440	Soybean	nucleus	28.85	20.05
PGSC0003DMT400000599	Potato	nucleus	27.27	19.94
Bra014426.1-P	Field mustard	nucleus	21.74	19.86
CDX89127	Canola	nucleus	21.74	19.86
KRH47935	Soybean	nucleus	28.85	19.78
KRH64503	Soybean	nucleus	28.46	19.78
PGSC0003DMT400023502	Potato	nucleus	27.67	19.66
HORVU0Hr1G012750.1	Barley	nucleus	25.69	19.58
PGSC0003DMT400014949	Potato	nucleus	27.27	19.17
Solyc08g008280.2.1	Tomato	nucleus	26.88	18.89
PGSC0003DMT400084227	Potato	nucleus	21.74	18.71
HORVU4Hr1G050320.2	Barley	nucleus	21.74	18.46
HORVU1Hr1G069620.7	Barley	nucleus	21.74	18.33
PGSC0003DMT400046351	Potato	nucleus	21.74	18.27
HORVU3Hr1G080860.1	Barley	nucleus	18.18	17.97
HORVU0Hr1G030830.1	Barley	nucleus, plastid	19.76	17.86
Solyc05g050310.1.1	Tomato	cytosol, nucleus	3.95	16.95
Solyc05g050340.2.1	Tomato	nucleus	21.74	16.82
HORVU2Hr1G017740.3	Barley	nucleus	22.92	16.67
HORVU3Hr1G081030.3	Barley	nucleus	20.95	16.56
HORVU7Hr1G083270.2	Barley	nucleus	20.16	16.56
PGSC0003DMT400084214	Potato	nucleus	21.34	16.31
HORVU7Hr1G075960.1	Barley	nucleus, plastid	18.58	16.04
HORVU2Hr1G109330.1	Barley	mitochondrion, nucleus, vacuole	20.16	15.69
HORVU3Hr1G081000.3	Barley	plastid	12.25	15.66
HORVU2Hr1G006600.1	Barley	nucleus	19.76	15.58
HORVU2Hr1G017720.1	Barley	nucleus, plastid	22.53	15.49
HORVU4Hr1G022970.2	Barley	nucleus, plastid	16.6	15.05
HORVU3Hr1G080890.1	Barley	nucleus, plastid, vacuole	16.6	14.29
HORVU1Hr1G069610.1	Barley	nucleus	16.21	14.19
HORVU1Hr1G069640.2	Barley	nucleus	15.81	13.65
HORVU0Hr1G023420.1	Barley	nucleus, plastid	16.21	13.14
HORVU3Hr1G080960.1	Barley	nucleus	17.39	12.22
CDX80415	Canola	nucleus	5.93	10.14

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A287GNQ7	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU1Hr1G090110	EnsemblPlants:HORVU1Hr1G090110.1	InterPro:IPR003657
InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF20	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000B473FF8	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

No Description!

Coordinates

chrchr1H:-:545364782..545365999

Molecular Weight (calculated)

26667.0 Da

IEP (calculated)

4.919

GRAVY (calculated)

-0.411

Length

253 amino acids

Sequence
(BLAST)

001: MEDTATAATL ATELDGLLAM ARELEARVDG DQGAPGAARE LCAALAESVD RAMRLAGSSE GEGEGNATGR ASVSGQVRGG RKSAANKVRT QVRVASVTDV
101: GPLNDGLSWR KYGQKDILGA TYPRAYFRCT HRHTQGCQAT KQVQRTHADP LLFEVAYHGE HTCVQAAVQQ QPPACFGQGQ QSPPAVAPEG IQWPVTPPSF
201: PSTQDDHVGD CYPSVCQLDG GYGYGAGGGL GADMGVGSQL DDWFLYLSEV QNL

Best Arabidopsis Sequence Match ( AT5G24110.1 )
(BLAST)

001: MEKNHSSGEW EKMKNEINEL MIEGRDYAHQ FGSASSQETR EHLAKKILQS YHKSLTIMNY SGELDQVSQG GGSPKSDDSD QEPLVIKSSK KSMPRWSSKV
101: RIAPGAGVDR TLDDGFSWRK YGQKDILGAK FPRGYYRCTY RKSQGCEATK QVQRSDENQM LLEISYRGIH SCSQAANVGT TMPIQNLEPN QTQEHGNLDM
201: VKESVDNYNH QAHLHHNLHY PLSSTPNLEN NNAYMLQMRD QNIEYFGSTS FSSDLGTSIN YNFPASGSAS HSASNSPSTV PLESPFESYD PNHPYGGFGG
301: FYS

Arabidopsis Description

WRKY30Probable WRKY transcription factor 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL62]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.