Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G300900.1 | Wheat | nucleus | 93.77 | 93.45 |
| TraesCS1B01G311000.1 | Wheat | nucleus | 92.39 | 92.71 |
| HORVU0Hr1G023420.1 | Barley | nucleus, plastid | 100.0 | 92.63 |
| TraesCS1A01G301200.1 | Wheat | nucleus | 92.73 | 92.41 |
| HORVU1Hr1G069640.2 | Barley | nucleus | 68.86 | 67.92 |
| EES19695 | Sorghum | nucleus | 50.52 | 62.13 |
| Zm00001d010616_P001 | Maize | nucleus, plastid | 48.44 | 61.4 |
| Os05t0478700-00 | Rice | nucleus | 49.83 | 51.43 |
| HORVU4Hr1G051970.1 | Barley | nucleus | 13.15 | 30.4 |
| HORVU4Hr1G052010.2 | Barley | nucleus | 14.53 | 20.39 |
| HORVU3Hr1G080860.1 | Barley | nucleus | 17.65 | 19.92 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 16.26 | 19.26 |
| HORVU3Hr1G080960.1 | Barley | nucleus | 23.18 | 18.61 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 19.38 | 18.18 |
| HORVU6Hr1G013890.3 | Barley | nucleus | 13.84 | 18.1 |
| HORVU4Hr1G050320.2 | Barley | nucleus | 16.95 | 16.44 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 14.19 | 16.21 |
| HORVU3Hr1G081000.3 | Barley | plastid | 11.07 | 16.16 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 14.53 | 16.15 |
| HORVU3Hr1G080980.1 | Barley | nucleus | 13.49 | 15.92 |
| HORVU4Hr1G022970.2 | Barley | nucleus, plastid | 15.22 | 15.77 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 13.84 | 15.75 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 17.99 | 15.66 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 13.15 | 15.57 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 13.15 | 15.38 |
| HORVU1Hr1G069620.7 | Barley | nucleus | 15.92 | 15.33 |
| HORVU3Hr1G080890.1 | Barley | nucleus, plastid, vacuole | 15.57 | 15.31 |
| HORVU2Hr1G006600.1 | Barley | nucleus | 16.61 | 14.95 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 12.11 | 14.06 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 19.03 | 14.03 |
| HORVU7Hr1G083270.2 | Barley | nucleus | 14.88 | 13.96 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 15.57 | 13.93 |
| HORVU0Hr1G030830.1 | Barley | nucleus, plastid | 13.49 | 13.93 |
| HORVU3Hr1G081030.3 | Barley | nucleus | 15.22 | 13.75 |
| HORVU7Hr1G075960.1 | Barley | nucleus, plastid | 13.84 | 13.65 |
| HORVU2Hr1G017720.1 | Barley | nucleus, plastid | 17.3 | 13.59 |
| HORVU2Hr1G017740.3 | Barley | nucleus | 15.57 | 12.93 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 14.53 | 12.65 |
| HORVU2Hr1G109330.1 | Barley | mitochondrion, nucleus, vacuole | 14.19 | 12.62 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:HORVU1Hr1G069610 | EnsemblPlants:HORVU1Hr1G069610.1 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:M0UHX5 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF24 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI000296DC29 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr1H:+:486434521..486437514
Molecular Weight (calculated)
32274.4 Da
IEP (calculated)
5.670
GRAVY (calculated)
-0.829
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMRPKTEMS PPPATPSPSD QRDAVIEELR KGSQLAEFLR QQVELIPEDR CRDAALANVS NISTALASSL SVLQSEKEQY CSSSSYDPGH ASGASGGGVR
101: NGPVARSRNR KAKHRRGTYG EDLPIKEILT EAPENDRFHW RKYGEKKILH ADFPRLYYRC GYSDEHKCPA KKYVQQQNSG DQPMFLVTLI NDHTCDTLFP
201: DEDQDQPPSS PSSANNSQVL DFSKASLSSA VGVSRLKEEE DADMSVTVPS YNYTYDELSS SSLPFLSPKQ WEMEMDIKSL FRRHSGDGN
101: NGPVARSRNR KAKHRRGTYG EDLPIKEILT EAPENDRFHW RKYGEKKILH ADFPRLYYRC GYSDEHKCPA KKYVQQQNSG DQPMFLVTLI NDHTCDTLFP
201: DEDQDQPPSS PSSANNSQVL DFSKASLSSA VGVSRLKEEE DADMSVTVPS YNYTYDELSS SSLPFLSPKQ WEMEMDIKSL FRRHSGDGN
001: MEMMNWERRS LLNELIHGLK AAKQLQAILM LNGSTTQHNP TIELAPDPLA HPGKVPGSPA SITGNPRSEE FFNVRSKEFN LSSKKRKMLP KWTEQVRISP
101: ERGLEGPHDD IFSWRKYGQK DILGAKFPRS YYRCTFRNTQ YCWATKQVQR SDGDPTIFEV TYRGTHTCSQ GIPLPEKRET KPKHTVAVNY QNLRASLTVR
201: TGGLGSEAFS FPVTSPLYTY ESINGGGTFY HHVGSSGPSD FTGLISTNTS TGSSPIFDVN FQFDPTAEIN TGFPTFFHNS I
101: ERGLEGPHDD IFSWRKYGQK DILGAKFPRS YYRCTFRNTQ YCWATKQVQR SDGDPTIFEV TYRGTHTCSQ GIPLPEKRET KPKHTVAVNY QNLRASLTVR
201: TGGLGSEAFS FPVTSPLYTY ESINGGGTFY HHVGSSGPSD FTGLISTNTS TGSSPIFDVN FQFDPTAEIN TGFPTFFHNS I
Arabidopsis Description
WRKY41Probable WRKY transcription factor 41 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.