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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole, plastid, nucleus

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
  • plastid 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G343100.1 Wheat nucleus 74.49 82.64
TraesCS3B01G375300.1 Wheat nucleus 74.15 82.26
TraesCS3D01G337100.1 Wheat nucleus 72.45 79.78
Os01t0820700-00 Rice nucleus 54.08 56.18
EES01667 Sorghum nucleus 45.58 50.76
Zm00001d043063_P001 Maize nucleus 43.2 48.29
HORVU4Hr1G051970.1 Barley nucleus 13.61 32.0
HORVU4Hr1G052010.2 Barley nucleus 16.33 23.3
HORVU6Hr1G013890.3 Barley nucleus 15.99 21.27
HORVU3Hr1G080860.1 Barley nucleus 18.03 20.7
HORVU3Hr1G080980.1 Barley nucleus 15.99 19.18
HORVU3Hr1G059220.1 Barley nucleus 19.39 18.51
HORVU1Hr1G090190.2 Barley nucleus 15.65 18.11
HORVU3Hr1G058670.1 Barley nucleus 15.31 18.07
HORVU1Hr1G090170.1 Barley nucleus 14.63 17.41
HORVU2Hr1G029430.2 Barley mitochondrion, nucleus 14.29 17.21
HORVU5Hr1G034830.3 Barley nucleus 19.39 17.17
HORVU3Hr1G059210.1 Barley nucleus 13.95 16.8
HORVU1Hr1G090110.1 Barley nucleus 14.29 16.6
HORVU4Hr1G022970.2 Barley nucleus, plastid 15.65 16.49
HORVU1Hr1G090130.4 Barley nucleus 14.29 16.15
HORVU5Hr1G056130.2 Barley nucleus 21.43 16.07
HORVU0Hr1G012750.1 Barley nucleus 18.03 15.96
HORVU4Hr1G050320.2 Barley nucleus 15.99 15.77
HORVU1Hr1G069640.2 Barley nucleus 15.65 15.7
HORVU1Hr1G069610.1 Barley nucleus 15.31 15.57
HORVU7Hr1G075960.1 Barley nucleus, plastid 15.31 15.36
HORVU1Hr1G069620.7 Barley nucleus 15.65 15.33
HORVU0Hr1G030830.1 Barley nucleus, plastid 14.29 15.0
HORVU2Hr1G017720.1 Barley nucleus, plastid 18.37 14.67
HORVU7Hr1G083270.2 Barley nucleus 15.31 14.61
HORVU3Hr1G080960.1 Barley nucleus 17.69 14.44
HORVU0Hr1G023420.1 Barley nucleus, plastid 15.31 14.42
HORVU2Hr1G017740.3 Barley nucleus 16.67 14.08
HORVU3Hr1G081030.3 Barley nucleus 14.97 13.75
HORVU0Hr1G012740.1 Barley nucleus 14.97 13.62
HORVU2Hr1G006600.1 Barley nucleus 14.29 13.08
HORVU2Hr1G109330.1 Barley mitochondrion, nucleus, vacuole 14.29 12.92
HORVU3Hr1G081000.3 Barley plastid 8.5 12.63
Protein Annotations
MapMan:15.5.22Gene3D:2.20.25.80UniProt:A0A287LWL1GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0043565EnsemblPlantsGene:HORVU3Hr1G080890EnsemblPlants:HORVU3Hr1G080890.1InterPro:IPR003657InterPro:IPR036576
PFAM:PF03106PFscan:PS50811PANTHER:PTHR31282PANTHER:PTHR31282:SF29SMART:SM00774SUPFAM:SSF118290
SignalP:SignalP-noTMUniParc:UPI000B46916CInterPro:WRKY_domInterPro:WRKY_dom_sfSEG:seg:
Description
No Description!
Coordinates
chrchr3H:-:591573238..591578701
Molecular Weight (calculated)
33280.5 Da
IEP (calculated)
7.729
GRAVY (calculated)
-0.831
Length
294 amino acids
Sequence
(BLAST)
001: IFSVSHIYLL HFLRAAIIST TSLCKDQAIQ WRHRRTRGSR LTSRIHPRRR PWDLPPRPTA LPEASSASPR RSHRVATAER EDRPSWVKNT FTPHFDGHLW
101: RKYGQKNIKD SVFPRLYYRC SYREDKQCLA SKLVQQENHE DPPLFKVTYT YEHTCNSAPV PTPDVVAELP APATGDALFL RFDSTGAGHR DAHRIEQERH
201: YQQPAAPGSG WPSMMLSFDS NSQQHEQCTF PSELPPAASS SFSTEGLPAP PSTTDGGGDG FSTWDSLRYG LNDHVHFGDH PYLPNSGNDG DDNY
Best Arabidopsis Sequence Match ( AT2G46400.1 )
(BLAST)
001: MMMEEKLVIN ELELGKELAN RLMNNLKHTS SVDSNKTLIS DILRIYQNAI FMLSFNQDKN ILKRSLEIDG KDSKNVFKKR KVSEKNTEKV KVFVATEQEN
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
Arabidopsis Description
WRKY46Probable WRKY transcription factor 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.