Factsheet for TraesCS3B01G375300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G343100.1	Wheat	nucleus	98.11	98.11
TraesCS3D01G337100.1	Wheat	nucleus	94.34	93.63
HORVU3Hr1G080890.1	Barley	nucleus, plastid, vacuole	82.26	74.15
Os01t0820700-00	Rice	nucleus	72.45	67.84
EES01667	Sorghum	nucleus	57.74	57.95
Zm00001d043063_P001	Maize	nucleus	54.34	54.75
TraesCS4B01G176700.1	Wheat	nucleus	18.87	24.27
TraesCS3B01G375200.1	Wheat	nucleus	20.75	21.57
TraesCS4B01G121500.1	Wheat	nucleus	17.36	20.72
TraesCS2B01G187500.1	Wheat	nucleus	21.13	19.11
TraesCS1B01G440700.1	Wheat	nucleus	17.36	19.09
TraesCS3B01G375700.1	Wheat	nucleus	19.25	18.75
TraesCS1B01G310900.1	Wheat	nucleus	20.0	18.53
TraesCS3B01G375800.1	Wheat	nucleus	18.49	18.22
TraesCS1B01G440600.1	Wheat	nucleus	16.23	18.07
TraesCS5B01G183700.1	Wheat	nucleus	22.64	17.7
TraesCS5B01G183800.1	Wheat	nucleus	22.64	17.34
TraesCS1B01G440500.1	Wheat	nucleus	16.98	17.24
TraesCS1B01G440300.1	Wheat	nucleus	15.85	17.14
TraesCS4B01G170100.1	Wheat	nucleus	19.25	16.89
TraesCS1B01G311000.1	Wheat	nucleus	18.11	16.67
TraesCS2B01G121800.1	Wheat	nucleus	21.51	16.43
TraesCS2B01G056300.1	Wheat	nucleus	17.36	16.37
TraesCS2B01G056400.1	Wheat	nucleus, plastid	17.74	16.32
TraesCS3B01G375600.1	Wheat	nucleus	19.62	16.15
TraesCS7B01G249700.1	Wheat	nucleus	15.85	15.33
TraesCS2B01G517400.1	Wheat	nucleus	16.98	15.15
TraesCS7B01G012600.1	Wheat	nucleus	21.13	15.09
TraesCS2B01G121900.1	Wheat	nucleus	19.62	13.68
TraesCS1B01G243100.1	Wheat	nucleus	16.6	12.26
TraesCS6B01G108000.1	Wheat	nucleus	18.11	12.24

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31282	PANTHER:PTHR31282:SF29	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS3B01G375300	EnsemblPlants:TraesCS3B01G375300.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3B:+:589543081..589549987

Molecular Weight (calculated)

29560.7 Da

IEP (calculated)

6.227

GRAVY (calculated)

-0.960

Length

265 amino acids

Sequence
(BLAST)

001: MASPPPKGES FDFEDPRAQE AMGSASASYS PPGGVFGISP PESSRRDSRK RRKDRPSWVK HTFTPHFDGH LWRKYGQKNI KDSVFPRLYY RCSYREDKQC
101: LASKLVQQEN HEDPPLFKVT YTYEHTCNTA PVPTPDVVAE LPAPATGDAL FLRFNSTGAG HRDAHRMEQE RHYQQPAAPG WPSMMLSFDS NSQQHEQCTF
201: PSELPPTASS SSFSTEGLPA PPSTTDGGGD GFSTWDSLRY GLNDHVHFGD HSYLPNSGND GDDNY

Best Arabidopsis Sequence Match ( AT2G46400.1 )
(BLAST)

001: MMMEEKLVIN ELELGKELAN RLMNNLKHTS SVDSNKTLIS DILRIYQNAI FMLSFNQDKN ILKRSLEIDG KDSKNVFKKR KVSEKNTEKV KVFVATEQEN
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS

Arabidopsis Description

WRKY46Probable WRKY transcription factor 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.