Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G080500.1 | Wheat | nucleus | 90.82 | 91.05 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 90.56 | 91.03 |
| HORVU6Hr1G013890.3 | Barley | nucleus | 50.51 | 89.59 |
| TraesCS1B01G243100.1 | Wheat | nucleus | 63.01 | 68.8 |
| Os05t0321900-01 | Rice | nucleus | 56.89 | 52.1 |
| OQU77713 | Sorghum | nucleus | 49.74 | 51.59 |
| Zm00001d037854_P001 | Maize | extracellular | 51.53 | 49.39 |
| GSMUA_Achr8P01730_001 | Banana | nucleus | 35.97 | 45.93 |
| CDY06968 | Canola | nucleus | 16.84 | 42.58 |
| CDY13358 | Canola | nucleus | 16.07 | 40.38 |
| GSMUA_Achr9P04830_001 | Banana | nucleus | 17.09 | 36.81 |
| GSMUA_Achr6P32460_001 | Banana | nucleus | 29.85 | 35.89 |
| AT2G40740.3 | Thale cress | nucleus | 27.04 | 35.22 |
| Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 21.43 | 34.57 |
| Bra016975.1-P | Field mustard | nucleus | 24.23 | 33.45 |
| CDY71829 | Canola | nucleus | 21.43 | 33.33 |
| CDY22473 | Canola | nucleus | 25.0 | 32.67 |
| Bra000202.1-P | Field mustard | nucleus | 24.74 | 32.33 |
| CDY35442 | Canola | nucleus | 24.49 | 31.89 |
| KRH53718 | Soybean | nucleus | 26.53 | 31.42 |
| KRH64215 | Soybean | nucleus | 26.79 | 31.16 |
| PGSC0003DMT400022638 | Potato | nucleus | 26.53 | 29.97 |
| CDY59625 | Canola | nucleus | 19.39 | 28.79 |
| VIT_13s0067g03130.t01 | Wine grape | nucleus | 26.53 | 28.57 |
| Bra014693.1-P | Field mustard | nucleus | 19.13 | 28.41 |
| CDX75991 | Canola | nucleus | 19.13 | 28.41 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 14.29 | 23.24 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 14.03 | 23.11 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 14.29 | 22.86 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 16.58 | 22.18 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 18.88 | 21.83 |
| TraesCS4B01G170100.1 | Wheat | nucleus | 16.58 | 21.52 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 18.88 | 21.39 |
| TraesCS4B01G176700.1 | Wheat | nucleus | 10.97 | 20.87 |
| TraesCS7B01G249700.1 | Wheat | nucleus | 14.29 | 20.44 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 13.52 | 20.31 |
| TraesCS4B01G121500.1 | Wheat | nucleus | 11.48 | 20.27 |
| TraesCS2B01G121800.1 | Wheat | nucleus | 17.86 | 20.17 |
| TraesCS3B01G375600.1 | Wheat | nucleus | 16.33 | 19.88 |
| TraesCS3B01G375200.1 | Wheat | nucleus | 12.5 | 19.22 |
| TraesCS3B01G375800.1 | Wheat | nucleus | 12.76 | 18.59 |
| TraesCS1B01G310900.1 | Wheat | nucleus | 13.52 | 18.53 |
| TraesCS3B01G375700.1 | Wheat | nucleus | 12.76 | 18.38 |
| TraesCS3B01G375300.1 | Wheat | nucleus | 12.24 | 18.11 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 17.09 | 18.06 |
| TraesCS2B01G517400.1 | Wheat | nucleus | 13.52 | 17.85 |
| TraesCS2B01G056400.1 | Wheat | nucleus, plastid | 12.76 | 17.36 |
| TraesCS2B01G121900.1 | Wheat | nucleus | 16.07 | 16.58 |
| TraesCS2B01G056300.1 | Wheat | nucleus | 11.73 | 16.37 |
| TraesCS1B01G311000.1 | Wheat | nucleus | 11.99 | 16.32 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF38 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS6B01G108000 | EnsemblPlants:TraesCS6B01G108000.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6B:-:88653306..88656286
Molecular Weight (calculated)
41213.5 Da
IEP (calculated)
7.676
GRAVY (calculated)
-0.337
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MHVLAPHSGG PPFAQLLGHL DRRVSKDIAA IHGGDLPGGM DDVLSQIGDA FRLAGELMGD LPAAQNDPAY LAARCYGIVR AYNTAIRMLQ HYGVGAVNVA
101: AAGALDGGGP LDLLRPRSTE EAAGASRLLG EAPTHLQEPF NMLAGARAPP HAHSVRAAAD VAGTSSGPVR RLASSRSPPP AQPRQGRRRR DSGQRETMLV
201: PAHRMGNTEL PPDDGYTWRK YGQKDILGSR FPRSYYRCTH KNYYGCDAKK KVQRLDDDPF MYEVTYCGSH SCLTSTTPLL NFPTATATNS PTAATGSGLA
301: PADHFMAPTE QAAVSTSMHL GVGWMPASFQ GVAPAGSCAG VGSSAGMQTS VSTPARDTDY PALDLADVMF NSGGSAGVGM DGIFSSHHRS DS
101: AAGALDGGGP LDLLRPRSTE EAAGASRLLG EAPTHLQEPF NMLAGARAPP HAHSVRAAAD VAGTSSGPVR RLASSRSPPP AQPRQGRRRR DSGQRETMLV
201: PAHRMGNTEL PPDDGYTWRK YGQKDILGSR FPRSYYRCTH KNYYGCDAKK KVQRLDDDPF MYEVTYCGSH SCLTSTTPLL NFPTATATNS PTAATGSGLA
301: PADHFMAPTE QAAVSTSMHL GVGWMPASFQ GVAPAGSCAG VGSSAGMQTS VSTPARDTDY PALDLADVMF NSGGSAGVGM DGIFSSHHRS DS
001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
Arabidopsis Description
WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.