Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 61.96 | 88.48 |
| CDY06968 | Canola | nucleus | 21.61 | 48.39 |
| CDY13358 | Canola | nucleus | 20.17 | 44.87 |
| HORVU6Hr1G013890.3 | Barley | nucleus | 25.07 | 39.37 |
| VIT_13s0067g03130.t01 | Wine grape | nucleus | 40.92 | 39.01 |
| GSMUA_Achr9P04830_001 | Banana | nucleus | 19.88 | 37.91 |
| KRH64215 | Soybean | nucleus | 35.45 | 36.5 |
| KRH53718 | Soybean | nucleus | 34.58 | 36.25 |
| AT2G40740.3 | Thale cress | nucleus | 31.41 | 36.21 |
| CDY71829 | Canola | nucleus | 26.22 | 36.11 |
| Bra016975.1-P | Field mustard | nucleus | 28.82 | 35.21 |
| Bra000202.1-P | Field mustard | nucleus | 29.68 | 34.33 |
| CDY22473 | Canola | nucleus | 29.68 | 34.33 |
| CDY35442 | Canola | nucleus | 29.39 | 33.89 |
| Bra014693.1-P | Field mustard | nucleus | 25.65 | 33.71 |
| CDX75991 | Canola | nucleus | 25.65 | 33.71 |
| CDY59625 | Canola | nucleus | 25.07 | 32.95 |
| GSMUA_Achr8P01730_001 | Banana | nucleus | 28.82 | 32.57 |
| GSMUA_Achr6P32460_001 | Banana | nucleus | 27.38 | 29.14 |
| TraesCS6A01G080500.1 | Wheat | nucleus | 30.26 | 26.85 |
| TraesCS6B01G108000.1 | Wheat | nucleus | 29.97 | 26.53 |
| OQU77713 | Sorghum | nucleus | 28.82 | 26.45 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 29.68 | 26.41 |
| Os05t0321900-01 | Rice | nucleus | 30.84 | 25.0 |
| TraesCS1B01G243100.1 | Wheat | nucleus | 25.07 | 24.23 |
| Zm00001d037854_P001 | Maize | extracellular | 27.95 | 23.72 |
| PGSC0003DMT400051194 | Potato | nucleus | 18.16 | 21.72 |
| PGSC0003DMT400070939 | Potato | nucleus | 13.83 | 21.52 |
| PGSC0003DMT400021625 | Potato | nucleus | 12.68 | 20.18 |
| PGSC0003DMT400046351 | Potato | nucleus | 17.29 | 19.93 |
| PGSC0003DMT400000599 | Potato | nucleus | 19.02 | 19.08 |
| PGSC0003DMT400084227 | Potato | nucleus | 16.14 | 19.05 |
| PGSC0003DMT400084214 | Potato | nucleus | 17.58 | 18.43 |
| PGSC0003DMT400031695 | Potato | nucleus | 17.0 | 17.4 |
| PGSC0003DMT400053122 | Potato | nucleus | 13.83 | 17.33 |
| PGSC0003DMT400014949 | Potato | nucleus | 17.87 | 17.22 |
| PGSC0003DMT400075091 | Potato | nucleus | 14.41 | 17.06 |
| PGSC0003DMT400023502 | Potato | nucleus | 17.29 | 16.85 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:M1AGZ7 | PFAM:PF03106 | EnsemblPlantsGene:PGSC0003DMG400008776 |
| PGSC:PGSC0003DMG400008776 | EnsemblPlants:PGSC0003DMT400022638 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF38 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000296D7D5 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
Transcription factor WRKY5 [Source:PGSC_GENE;Acc:PGSC0003DMG400008776]
Coordinates
chr6:+:34424563..34429400
Molecular Weight (calculated)
38147.5 Da
IEP (calculated)
6.349
GRAVY (calculated)
-0.572
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MEANLPNWAN QRDVLLSKTE EIIAVFSNVK ERLIINQQQE VVQEWLSNSG HQQALELFHA ADQNMLSDHT ATAAATTMPF TVHGLPQESD QMMVGDASHD
101: SSRVAAATSS SSQRQRTRCR TGDRDRRTLR VGAPRMGNLE LPPEDGYTWR KYGQKEILGS RFPRAYYRCT HQKLYHCPAK KQVQRLDNDP YVFEVTYRSQ
201: HTCYMSATAP TVPPPSVEEI THQTITTLPS APLILAPPTS ASLSGHWLSM DIKPQGDQAG TSYTTTFDIQ RDFGNGSVGS LASLVTAGVG GGGGVGPSGG
301: RFGREVDYQP VVDMADAMFN SGSSSNTSLD KIFSSIDEKW DTAEKKE
101: SSRVAAATSS SSQRQRTRCR TGDRDRRTLR VGAPRMGNLE LPPEDGYTWR KYGQKEILGS RFPRAYYRCT HQKLYHCPAK KQVQRLDNDP YVFEVTYRSQ
201: HTCYMSATAP TVPPPSVEEI THQTITTLPS APLILAPPTS ASLSGHWLSM DIKPQGDQAG TSYTTTFDIQ RDFGNGSVGS LASLVTAGVG GGGGVGPSGG
301: RFGREVDYQP VVDMADAMFN SGSSSNTSLD KIFSSIDEKW DTAEKKE
001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
Arabidopsis Description
WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.