Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71829 | Canola | nucleus | 90.97 | 55.95 |
| Bra016975.1-P | Field mustard | nucleus | 88.39 | 48.24 |
| CDY22473 | Canola | nucleus | 79.35 | 41.0 |
| CDY35442 | Canola | nucleus | 78.06 | 40.2 |
| CDY13358 | Canola | nucleus | 39.35 | 39.1 |
| AT2G40740.3 | Thale cress | nucleus | 66.45 | 34.22 |
| GSMUA_Achr9P04830_001 | Banana | nucleus | 35.48 | 30.22 |
| HORVU6Hr1G013890.3 | Barley | nucleus | 41.94 | 29.41 |
| Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 45.81 | 29.22 |
| CDY59625 | Canola | nucleus | 46.45 | 27.27 |
| CDX75991 | Canola | nucleus | 45.81 | 26.89 |
| KRH64215 | Soybean | nucleus | 48.39 | 22.26 |
| PGSC0003DMT400022638 | Potato | nucleus | 48.39 | 21.61 |
| KRH53718 | Soybean | nucleus | 45.81 | 21.45 |
| GSMUA_Achr8P01730_001 | Banana | nucleus | 41.29 | 20.85 |
| VIT_13s0067g03130.t01 | Wine grape | nucleus | 46.45 | 19.78 |
| GSMUA_Achr6P32460_001 | Banana | nucleus | 38.71 | 18.4 |
| OQU77713 | Sorghum | nucleus | 42.58 | 17.46 |
| TraesCS6A01G080500.1 | Wheat | nucleus | 43.23 | 17.14 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 42.58 | 16.92 |
| CDX83367 | Canola | nucleus | 30.32 | 16.91 |
| TraesCS6B01G108000.1 | Wheat | nucleus | 42.58 | 16.84 |
| CDX95699 | Canola | nucleus | 30.32 | 16.49 |
| CDX89127 | Canola | nucleus | 28.39 | 15.88 |
| TraesCS1B01G243100.1 | Wheat | nucleus | 36.77 | 15.88 |
| CDY42043 | Canola | nucleus | 29.68 | 15.7 |
| Os05t0321900-01 | Rice | nucleus | 43.23 | 15.65 |
| Zm00001d037854_P001 | Maize | extracellular | 41.29 | 15.65 |
| CDX80015 | Canola | nucleus | 29.68 | 15.54 |
| CDX94221 | Canola | nucleus | 30.32 | 14.64 |
| CDY03518 | Canola | nucleus | 29.68 | 14.6 |
| CDY47621 | Canola | nucleus | 29.68 | 14.56 |
| CDY19847 | Canola | nucleus | 29.03 | 14.42 |
| CDX87141 | Canola | nucleus | 29.03 | 14.42 |
| CDX80414 | Canola | nucleus | 29.03 | 14.38 |
| CDX88077 | Canola | nucleus | 29.03 | 14.38 |
| CDY10969 | Canola | nucleus | 29.68 | 14.24 |
| CDX72140 | Canola | nucleus | 24.52 | 13.77 |
| CDX75992 | Canola | nucleus | 24.52 | 13.33 |
| CDY66845 | Canola | nucleus | 24.52 | 13.24 |
| CDX67645 | Canola | nucleus | 23.87 | 13.07 |
| CDY27218 | Canola | nucleus | 23.23 | 13.04 |
| CDY65042 | Canola | nucleus | 27.74 | 13.03 |
| CDY32013 | Canola | nucleus | 23.23 | 12.72 |
| CDY25271 | Canola | nucleus | 27.1 | 12.69 |
| CDY06967 | Canola | nucleus | 24.52 | 11.52 |
| CDY14738 | Canola | nucleus | 24.52 | 11.52 |
| CDY23883 | Canola | nucleus | 24.52 | 11.21 |
| CDY35441 | Canola | nucleus | 24.52 | 11.18 |
| CDX79972 | Canola | nucleus | 23.87 | 10.98 |
| CDY22474 | Canola | nucleus | 23.87 | 10.88 |
| CDX80415 | Canola | nucleus | 1.29 | 1.35 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078F5M8 | EnsemblPlants:CDY06968 | ProteinID:CDY06968 | ProteinID:CDY06968.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00123274001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 |
| PANTHER:PTHR31282:SF38 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EECC85 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA04g23470D
Coordinates
chrLK031974:-:417931..418795
Molecular Weight (calculated)
17706.5 Da
IEP (calculated)
7.175
GRAVY (calculated)
-0.793
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MQYVPYVLTW IKTGNINLPP DDNHTWRKYG QKEILGSKFP RAYYRCTHQK LYNCPAKKQV QRLNDDPFTF RVNYRGSHTC HIYSTAPTAS TAAPTTPVTT
101: SFSLDYGPPF FDMADAMMFG SSGIGANMDI YSFNDPSHHD DHCYRRSEDG DDGDK
101: SFSLDYGPPF FDMADAMMFG SSGIGANMDI YSFNDPSHHD DHCYRRSEDG DDGDK
001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
Arabidopsis Description
WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.