Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83367 | Canola | nucleus | 92.28 | 94.6 |
| CDY42043 | Canola | nucleus | 74.74 | 72.7 |
| CDX80015 | Canola | nucleus | 75.09 | 72.3 |
| AT2G46400.1 | Thale cress | nucleus | 73.68 | 71.19 |
| CDX89127 | Canola | nucleus | 49.12 | 50.54 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 36.84 | 32.51 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 27.02 | 30.92 |
| CDY06968 | Canola | nucleus | 16.49 | 30.32 |
| KRH68901 | Soybean | nucleus | 37.19 | 29.28 |
| CDY13358 | Canola | nucleus | 15.79 | 28.85 |
| KRG97154 | Soybean | nucleus | 36.49 | 28.73 |
| KRH47935 | Soybean | nucleus | 36.84 | 28.46 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 30.53 | 28.06 |
| KRH06499 | Soybean | nucleus | 36.49 | 27.88 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 32.28 | 27.71 |
| Zm00001d020136_P001 | Maize | nucleus | 29.12 | 27.48 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 28.07 | 27.3 |
| EER96589 | Sorghum | nucleus | 29.47 | 27.1 |
| Os11t0685700-00 | Rice | nucleus | 18.25 | 27.08 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 27.72 | 26.96 |
| PGSC0003DMT400051194 | Potato | nucleus | 26.67 | 26.21 |
| CDY10969 | Canola | nucleus | 29.47 | 26.01 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 26.67 | 25.68 |
| CDY47621 | Canola | nucleus | 28.42 | 25.63 |
| Solyc10g009550.2.1 | Tomato | nucleus | 25.96 | 25.52 |
| CDY03518 | Canola | nucleus | 28.07 | 25.4 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 21.75 | 25.31 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 21.75 | 25.1 |
| EER96590 | Sorghum | nucleus | 28.77 | 25.0 |
| Zm00001d020137_P001 | Maize | nucleus | 28.42 | 25.0 |
| CDX94221 | Canola | nucleus | 28.07 | 24.92 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 21.05 | 24.79 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 21.05 | 24.59 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 21.75 | 24.51 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 20.7 | 24.48 |
| Os08t0386200-01 | Rice | nucleus | 27.37 | 24.45 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 29.12 | 24.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.26 | 24.41 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 21.05 | 24.39 |
| CDX87141 | Canola | nucleus | 26.67 | 24.36 |
| CDY19847 | Canola | nucleus | 26.67 | 24.36 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 21.05 | 24.29 |
| Os05t0571200-01 | Rice | nucleus | 23.51 | 24.19 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 28.07 | 24.1 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 20.0 | 23.95 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 29.47 | 23.93 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 30.18 | 23.89 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 20.7 | 23.89 |
| Zm00001d005622_P001 | Maize | nucleus | 27.72 | 23.87 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 28.42 | 23.75 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 21.05 | 23.72 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 28.77 | 23.7 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 28.07 | 23.6 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 28.77 | 23.5 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 23.86 | 23.37 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 20.0 | 23.36 |
| CDY65042 | Canola | nucleus | 27.02 | 23.33 |
| Solyc01g095630.2.1 | Tomato | nucleus | 27.37 | 23.21 |
| PGSC0003DMT400000599 | Potato | nucleus | 28.07 | 23.12 |
| CDX75991 | Canola | nucleus | 21.4 | 23.11 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 21.05 | 23.08 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 27.72 | 23.03 |
| Os01t0656400-00 | Rice | nucleus | 22.11 | 22.99 |
| CDY25271 | Canola | nucleus | 26.67 | 22.96 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 20.35 | 22.83 |
| Os09t0334500-01 | Rice | nucleus | 28.77 | 22.71 |
| CDX80414 | Canola | nucleus | 24.91 | 22.68 |
| CDX88077 | Canola | nucleus | 24.91 | 22.68 |
| CDY71829 | Canola | nucleus | 20.0 | 22.62 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 23.86 | 22.08 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 17.89 | 21.89 |
| Zm00001d050247_P001 | Maize | nucleus | 24.56 | 21.88 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 20.0 | 21.84 |
| CDY59625 | Canola | nucleus | 20.0 | 21.59 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 19.3 | 21.57 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 26.32 | 21.49 |
| OQU80381 | Sorghum | nucleus | 25.61 | 21.47 |
| CDY22473 | Canola | nucleus | 22.46 | 21.33 |
| Zm00001d032265_P001 | Maize | nucleus | 24.91 | 21.32 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 23.16 | 21.29 |
| CDY35442 | Canola | nucleus | 22.46 | 21.26 |
| Zm00001d011496_P002 | Maize | nucleus | 24.21 | 21.1 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 23.51 | 20.74 |
| EES18716 | Sorghum | nucleus | 19.65 | 20.59 |
| EES03370 | Sorghum | nucleus | 24.91 | 20.52 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 17.89 | 20.48 |
| CDY27218 | Canola | nucleus | 19.65 | 20.29 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 27.72 | 20.15 |
| CDX72140 | Canola | nucleus | 19.3 | 19.93 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 25.26 | 19.57 |
| CDX80415 | Canola | nucleus | 9.82 | 18.92 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 24.21 | 18.6 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 24.56 | 18.57 |
| Zm00001d044010_P001 | Maize | nucleus | 21.75 | 18.51 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 21.4 | 18.37 |
| CDY66845 | Canola | nucleus | 18.25 | 18.12 |
| CDX75992 | Canola | nucleus | 17.89 | 17.89 |
| Zm00001d009619_P002 | Maize | nucleus | 18.6 | 17.85 |
| EER87882 | Sorghum | nucleus | 23.51 | 17.72 |
| CDX67645 | Canola | nucleus | 17.54 | 17.67 |
| Zm00001d045283_P001 | Maize | nucleus | 24.21 | 17.42 |
| Os06t0158100-00 | Rice | nucleus | 23.86 | 17.39 |
| CDY32013 | Canola | nucleus | 17.19 | 17.31 |
| Zm00001d036244_P001 | Maize | nucleus | 22.11 | 17.21 |
| CDY23883 | Canola | nucleus | 20.0 | 16.81 |
| CDY22474 | Canola | nucleus | 19.65 | 16.47 |
| CDY35441 | Canola | nucleus | 19.65 | 16.47 |
| CDX79972 | Canola | nucleus | 19.3 | 16.32 |
| CDY06967 | Canola | nucleus | 18.25 | 15.76 |
| CDY14738 | Canola | nucleus | 18.25 | 15.76 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078E572 | EnsemblPlants:CDX95699 | ProteinID:CDX95699 | ProteinID:CDX95699.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00101591001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR32096 | PANTHER:PTHR32096:SF20 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EED766 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | : | : | : | : | : |
Description
BnaC03g25800D
Coordinates
chrLK031890:-:699905..701057
Molecular Weight (calculated)
32335.1 Da
IEP (calculated)
5.777
GRAVY (calculated)
-0.661
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMEEKLVIN ELEQGRELAK RLISNLKHTS SVESSKIMIS EILRIYQNAI LMLSFKEDDK NILKRSREIE DKDSKTLSKK RKLSDKKTEE VKVFVGTGSI
101: DDGYCWRKYG QKEIHGSSNP RGYFRCTHRF TKKCPAVKQV QRSDEDPSIF EVKYVGTHTC NNNSTSPKTT ATSFSVSMMV EEGNRVGLTE QTEDIKPTKT
201: EEVMISLEDL EYKKDIFKTY SFSNHETENV GGWKSNIFQE NLSPATTSGS GMTSEIAIAV EDWGTVDSCF SSLDNIIDLG QDLWS
101: DDGYCWRKYG QKEIHGSSNP RGYFRCTHRF TKKCPAVKQV QRSDEDPSIF EVKYVGTHTC NNNSTSPKTT ATSFSVSMMV EEGNRVGLTE QTEDIKPTKT
201: EEVMISLEDL EYKKDIFKTY SFSNHETENV GGWKSNIFQE NLSPATTSGS GMTSEIAIAV EDWGTVDSCF SSLDNIIDLG QDLWS
001: MMMEEKLVIN ELELGKELAN RLMNNLKHTS SVDSNKTLIS DILRIYQNAI FMLSFNQDKN ILKRSLEIDG KDSKNVFKKR KVSEKNTEKV KVFVATEQEN
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
Arabidopsis Description
WRKY46Probable WRKY transcription factor 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.