Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P14140_001 | Banana | nucleus | 47.06 | 44.44 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 41.47 | 43.65 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 31.18 | 42.57 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 38.24 | 41.94 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 39.41 | 39.18 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 36.76 | 37.65 |
| KRH64503 | Soybean | nucleus | 39.41 | 36.81 |
| KRH53440 | Soybean | nucleus | 39.41 | 36.81 |
| KRH77637 | Soybean | nucleus | 34.12 | 36.02 |
| KRH68901 | Soybean | nucleus | 37.94 | 35.64 |
| KRG97154 | Soybean | nucleus | 37.94 | 35.64 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.88 | 35.59 |
| AT4G11070.1 | Thale cress | nucleus | 32.65 | 35.46 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 37.94 | 35.44 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 31.47 | 34.52 |
| PGSC0003DMT400031695 | Potato | nucleus | 34.41 | 34.51 |
| Solyc08g082110.2.1 | Tomato | nucleus | 34.41 | 34.51 |
| CDY65042 | Canola | nucleus | 33.24 | 34.24 |
| Bra033158.1-P | Field mustard | nucleus | 32.94 | 33.84 |
| CDY25271 | Canola | nucleus | 32.94 | 33.84 |
| CDY10969 | Canola | nucleus | 31.76 | 33.44 |
| CDY03518 | Canola | nucleus | 30.88 | 33.33 |
| Bra019265.1-P | Field mustard | nucleus | 31.47 | 33.13 |
| Bra013732.1-P | Field mustard | nucleus | 30.59 | 32.91 |
| CDY47621 | Canola | nucleus | 30.59 | 32.91 |
| KRH41300 | Soybean | nucleus | 34.41 | 32.59 |
| KRH60029 | Soybean | nucleus | 34.71 | 32.51 |
| CDX94221 | Canola | nucleus | 30.59 | 32.4 |
| PGSC0003DMT400014949 | Potato | nucleus | 34.12 | 32.22 |
| AT4G23810.1 | Thale cress | nucleus | 30.29 | 31.79 |
| Solyc08g008280.2.1 | Tomato | nucleus | 33.53 | 31.67 |
| Bra004540.1-P | Field mustard | nucleus | 26.18 | 31.23 |
| KRH47935 | Soybean | nucleus | 33.82 | 31.17 |
| KRH06499 | Soybean | nucleus | 34.12 | 31.1 |
| CDY42043 | Canola | nucleus | 26.76 | 31.06 |
| PGSC0003DMT400051194 | Potato | nucleus | 26.18 | 30.69 |
| CDX80015 | Canola | nucleus | 26.47 | 30.41 |
| PGSC0003DMT400000599 | Potato | nucleus | 30.88 | 30.35 |
| AT2G46400.1 | Thale cress | nucleus | 26.18 | 30.17 |
| Solyc01g095630.2.1 | Tomato | nucleus | 29.71 | 30.06 |
| Solyc10g009550.2.1 | Tomato | nucleus | 25.59 | 30.0 |
| Bra000423.1-P | Field mustard | nucleus | 24.41 | 29.54 |
| Solyc03g007380.1.1 | Tomato | nucleus | 30.59 | 29.46 |
| CDX95699 | Canola | nucleus | 24.41 | 29.12 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 29.71 | 28.94 |
| Bra014426.1-P | Field mustard | nucleus | 23.53 | 28.88 |
| CDX89127 | Canola | nucleus | 23.53 | 28.88 |
| CDX83367 | Canola | nucleus | 23.53 | 28.78 |
| PGSC0003DMT400023502 | Potato | nucleus | 30.0 | 28.65 |
| CDX87141 | Canola | nucleus | 26.18 | 28.53 |
| CDY19847 | Canola | nucleus | 26.18 | 28.53 |
| Bra026467.1-P | Field mustard | nucleus | 26.18 | 28.53 |
| AT5G24110.1 | Thale cress | nucleus | 24.12 | 27.06 |
| GSMUA_Achr9P04830_001 | Banana | nucleus | 14.41 | 26.92 |
| CDX80414 | Canola | nucleus | 24.71 | 26.84 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 25.88 | 26.27 |
| Bra009734.1-P | Field mustard | nucleus | 24.12 | 26.2 |
| CDX88077 | Canola | nucleus | 24.12 | 26.2 |
| Solyc05g050300.1.1 | Tomato | nucleus | 14.12 | 24.62 |
| PGSC0003DMT400084227 | Potato | nucleus | 20.0 | 23.13 |
| Solyc05g050330.2.1 | Tomato | nucleus | 16.47 | 22.95 |
| PGSC0003DMT400046351 | Potato | nucleus | 19.71 | 22.26 |
| GSMUA_Achr8P01730_001 | Banana | nucleus | 20.0 | 22.15 |
| GSMUA_Achr6P32460_001 | Banana | nucleus | 21.18 | 22.09 |
| GSMUA_Achr8P25110_001 | Banana | nucleus | 14.12 | 21.62 |
| GSMUA_Achr5P08580_001 | Banana | nucleus | 19.41 | 21.57 |
| GSMUA_Achr7P22020_001 | Banana | extracellular, nucleus | 14.12 | 21.15 |
| Solyc05g050340.2.1 | Tomato | nucleus | 20.29 | 21.1 |
| PGSC0003DMT400084214 | Potato | nucleus | 20.29 | 20.85 |
| GSMUA_Achr6P25120_001 | Banana | nucleus | 13.53 | 20.72 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 2.94 | 16.95 |
| CDX80415 | Canola | nucleus | 7.35 | 16.89 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr6G05710_001 | EnsemblPlants:GSMUA_Achr6P05710_001 | EnsemblPlants:GSMUA_Achr6T05710_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0T4G9 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF20 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000296CE60 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
Putative OsWRKY69 - Superfamily of TFs having WRKY and zinc finger domains, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G05710_001]
Coordinates
chr6:+:3852604..3854034
Molecular Weight (calculated)
37751.1 Da
IEP (calculated)
7.195
GRAVY (calculated)
-0.651
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLSSLVEVL MHGEEQLRQL EACLDVHSPV EHKKQLVLQA QSHFKRAISM AKSIDHERFR QGPGASAAAL DSPRSNSGGS DNSDKALKEQ ERREMCKKRK
101: TLPKWTSQIR ISSSEGVDGL DDGHSWRKYG QKEILGAKYP RSYFRCTHRN TVGCFAMKQV QRSDDDPSVF DITYRGEHTC PQKPRTVATS ALHRPDIHQS
201: QQRPRQDQQL LLSFQTSLKV KTEGSSFEDP DQNSPFSFSS TPMSTLCTPP TPENKFMGSF SAAFPSPATS ESKHFSPSPC RVSSFGDAPP LHITESDLSD
301: FISATTSAAT SSAMDIAFML DSVGFDPAFH FDASSFLHNL
101: TLPKWTSQIR ISSSEGVDGL DDGHSWRKYG QKEILGAKYP RSYFRCTHRN TVGCFAMKQV QRSDDDPSVF DITYRGEHTC PQKPRTVATS ALHRPDIHQS
201: QQRPRQDQQL LLSFQTSLKV KTEGSSFEDP DQNSPFSFSS TPMSTLCTPP TPENKFMGSF SAAFPSPATS ESKHFSPSPC RVSSFGDAPP LHITESDLSD
301: FISATTSAAT SSAMDIAFML DSVGFDPAFH FDASSFLHNL
001: MEMMNWERRS LLNELIHGLK AAKQLQGSSS PSLSASSSYL TTEIKENLLH NIVSSFKKAI LMLNGSTTQH NPTIELAPDP LAHPGKVPGS PASITGNPRS
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI
Arabidopsis Description
WRKY41Probable WRKY transcription factor 41 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.