Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P01390_001 | Banana | cytosol | 93.24 | 93.24 |
| GSMUA_Achr2P12680_001 | Banana | cytosol | 85.14 | 85.14 |
| VIT_05s0020g04420.t01 | Wine grape | cytosol | 82.43 | 81.88 |
| GSMUA_Achr1P04700_001 | Banana | cytosol | 81.08 | 81.08 |
| GSMUA_Achr5P09010_001 | Banana | cytosol | 79.73 | 79.73 |
| PGSC0003DMT400042062 | Potato | cytosol | 80.41 | 79.33 |
| KRH34350 | Soybean | cytosol | 80.41 | 79.33 |
| KRG92449 | Soybean | cytosol | 79.73 | 78.67 |
| GSMUA_Achr6P24410_001 | Banana | cytosol | 79.05 | 78.52 |
| GSMUA_Achr1P27230_001 | Banana | cytosol | 78.38 | 78.38 |
| GSMUA_Achr6P23670_001 | Banana | cytosol | 78.38 | 77.85 |
| GSMUA_Achr3P25040_001 | Banana | cytosol | 78.38 | 77.85 |
| Solyc06g053930.2.1 | Tomato | cytosol | 78.38 | 77.85 |
| KRH69070 | Soybean | cytosol | 78.38 | 77.33 |
| GSMUA_Achr6P15990_001 | Banana | cytosol | 77.7 | 77.18 |
| GSMUA_Achr5P07820_001 | Banana | cytosol | 77.7 | 77.18 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane | 77.7 | 77.18 |
| GSMUA_Achr3P09330_001 | Banana | cytosol | 77.7 | 77.18 |
| GSMUA_Achr2P01120_001 | Banana | cytosol | 77.7 | 77.18 |
| VIT_14s0030g02150.t01 | Wine grape | cytosol | 79.73 | 77.12 |
| KRH31638 | Soybean | cytosol | 77.7 | 76.67 |
| GSMUA_Achr9P17280_001 | Banana | cytosol | 77.03 | 76.51 |
| GSMUA_Achr10P... | Banana | cytosol | 77.03 | 76.51 |
| GSMUA_AchrUn_... | Banana | cytosol | 75.68 | 76.19 |
| Bra001892.1-P | Field mustard | cytosol | 78.38 | 75.32 |
| CDX92965 | Canola | cytosol | 78.38 | 75.32 |
| GSMUA_Achr7P07720_001 | Banana | cytosol | 75.0 | 75.0 |
| GSMUA_Achr11P... | Banana | cytosol | 51.35 | 74.51 |
| Bra023786.1-P | Field mustard | cytosol | 78.38 | 74.36 |
| CDY34215 | Canola | cytosol | 78.38 | 74.36 |
| Bra033898.1-P | Field mustard | cytosol | 77.7 | 74.19 |
| CDY10686 | Canola | cytosol | 77.03 | 73.55 |
| GSMUA_Achr5P27590_001 | Banana | cytosol | 57.43 | 73.28 |
| AT4G14640.1 | Thale cress | cytosol | 74.32 | 72.85 |
| KRH68729 | Soybean | cytosol | 72.97 | 72.48 |
| KRG96966 | Soybean | cytosol | 72.3 | 71.81 |
| CDX94883 | Canola | cytosol | 52.7 | 70.27 |
| CDY06478 | Canola | cytosol | 71.62 | 70.2 |
| Bra039723.1-P | Field mustard | cytosol | 71.62 | 69.28 |
| AT3G22930.1 | Thale cress | cytosol | 79.05 | 67.63 |
| KRH67274 | Soybean | cytosol | 67.57 | 67.57 |
| CDY10325 | Canola | cytosol | 51.35 | 67.26 |
| VIT_00s0179g00280.t01 | Wine grape | cytosol | 67.57 | 67.11 |
| PGSC0003DMT400034833 | Potato | cytosol | 68.92 | 66.67 |
| KRG95596 | Soybean | cytosol | 66.22 | 66.22 |
| Solyc03g005240.1.1 | Tomato | cytosol | 67.57 | 65.36 |
| Solyc01g105630.2.1 | Tomato | cytosol | 64.19 | 64.63 |
| CDY40824 | Canola | cytosol | 78.38 | 64.44 |
| KRH34082 | Soybean | cytosol | 64.86 | 64.43 |
| PGSC0003DMT400083727 | Potato | cytosol | 63.51 | 63.95 |
| KRG92667 | Soybean | cytosol | 63.51 | 63.09 |
| KRG94637 | Soybean | cytosol | 47.3 | 61.4 |
| KRH71363 | Soybean | cytosol | 56.76 | 56.38 |
| KRH32074 | Soybean | cytosol | 54.73 | 54.36 |
| GSMUA_Achr10P... | Banana | cytosol | 64.86 | 51.06 |
| GSMUA_Achr10P... | Banana | cytosol | 64.86 | 50.79 |
| GSMUA_Achr3P25390_001 | Banana | cytosol | 60.14 | 48.63 |
| GSMUA_Achr1P14070_001 | Banana | cytosol | 67.57 | 44.25 |
| GSMUA_Achr3P26750_001 | Banana | cytosol, plasma membrane | 37.84 | 37.84 |
| GSMUA_Achr6P10140_001 | Banana | cytosol | 40.54 | 36.81 |
| GSMUA_Achr8P29750_001 | Banana | cytosol, mitochondrion | 38.51 | 34.76 |
| GSMUA_Achr9P21860_001 | Banana | cytosol, mitochondrion | 37.16 | 33.74 |
| GSMUA_Achr1P25220_001 | Banana | cytosol | 36.49 | 33.13 |
| GSMUA_Achr8P05790_001 | Banana | cytosol | 37.84 | 22.86 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P22570_001 | EnsemblPlants:GSMUA_Achr4T22570_001 | EnsemblPlantsGene:GSMUA_Achr4G22570_001 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 |
| PANTHER:PTHR23050:SF336 | PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI0002961653 | UniProt:M0SR70 | MapMan:35.1 | : | : | : |
Description
Calmodulin [Source:GMGC_GENE;Acc:GSMUA_Achr4G22570_001]
Coordinates
chr4:+:22860030..22861512
Molecular Weight (calculated)
16904.9 Da
IEP (calculated)
3.740
GRAVY (calculated)
-0.417
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MDILTDEQII EFQEAFCLFD KDGDGCITLE ELGTVIKSLG QDPSEEELQE MIREVDSDGN GTIEFGEFLN LMARKVKETN IEEELKEAFK VFDKDQNGFI
101: SATELRNVMI NLGEKLTDEE VDQMIREADL DGDGQVNYEE FVRMMMAV
101: SATELRNVMI NLGEKLTDEE VDQMIREADL DGDGQVNYEE FVRMMMAV
001: MEEIQQQQQQ QQQQQQQQQQ QQQQQQELTQ EQIMEFKEAF CLFDKDGDGC ITADELATVI RSLDQNPTEQ ELQDMITEID SDGNGTIEFS EFLNLMANQL
101: QETDADEELK EAFKVFDKDQ NGYISASELR HVMINLGEKL TDEEVDQMIK EADLDGDGQV NYDEFVRMMM ING
101: QETDADEELK EAFKVFDKDQ NGYISASELR HVMINLGEKL TDEEVDQMIK EADLDGDGQV NYDEFVRMMM ING
Arabidopsis Description
CML11Calmodulin-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.