CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34350	Soybean	cytosol	99.33	99.33
VIT_05s0020g04420.t01	Wine grape	cytosol	92.0	92.62
KRH69070	Soybean	cytosol	90.67	90.67
KRH31638	Soybean	cytosol	90.0	90.0
Solyc06g053930.2.1	Tomato	cytosol	87.33	87.92
PGSC0003DMT400042062	Potato	cytosol	86.67	86.67
GSMUA_Achr2P12680_001	Banana	cytosol	80.0	81.08
GSMUA_Achr4P22570_001	Banana	cytosol	78.67	79.73
GSMUA_Achr7P01390_001	Banana	cytosol	78.67	79.73
GSMUA_Achr1P04700_001	Banana	cytosol	77.33	78.38
GSMUA_Achr1P27230_001	Banana	cytosol	77.33	78.38
KRG94975	Soybean	nucleus	77.33	77.85
GSMUA_Achr6P24410_001	Banana	cytosol	76.0	76.51
PGSC0003DMT400034833	Potato	cytosol	76.67	75.16
KRH68729	Soybean	cytosol	73.33	73.83
KRG96966	Soybean	cytosol	72.67	73.15
GSMUA_Achr5P09010_001	Banana	cytosol	72.0	72.97
Solyc03g005240.1.1	Tomato	cytosol	74.0	72.55
KRH18664	Soybean	cytosol	66.67	71.43
KRH67274	Soybean	cytosol	68.0	68.92
KRG95596	Soybean	cytosol	66.67	67.57
Os03t0743500-02	Rice	nucleus	68.67	66.88
KXG37587	Sorghum	cytosol	68.0	66.23
KRH34082	Soybean	cytosol	64.67	65.1
KRG92667	Soybean	cytosol	63.33	63.76
KRG94637	Soybean	cytosol	48.0	63.16
KRG89812	Soybean	cytosol, mitochondrion	65.33	59.39
KRH71363	Soybean	cytosol	58.0	58.39
KRH32074	Soybean	cytosol	56.0	56.38
Zm00001d033980_P001	Maize	cytosol	55.33	52.87
TraesCS5A01G382800.2	Wheat	plastid	62.67	50.27
GSMUA_Achr3P25390_001	Banana	cytosol	60.67	49.73
GSMUA_Achr1P14070_001	Banana	cytosol	68.0	45.13
KRH77406	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	43.33	44.22
KRH28027	Soybean	cytosol, endoplasmic reticulum, nucleus	42.67	43.54
KRH25249	Soybean	cytosol	44.67	41.1
KRH30413	Soybean	cytosol	43.33	40.88
KRH04023	Soybean	cytosol	40.0	40.82
KRH07628	Soybean	cytosol	39.33	36.88
KRH56721	Soybean	cytosol	39.33	36.65
KRH62961	Soybean	cytosol	38.67	36.25
KRH10567	Soybean	endoplasmic reticulum	40.67	35.88
KRH54782	Soybean	cytosol	36.0	33.75
KRH43884	Soybean	cytosol	28.0	32.06
KRG98826	Soybean	cytosol	32.0	30.57
KRG98823	Soybean	cytosol	30.67	29.3
KXG37588	Sorghum	mitochondrion, nucleus	1.33	1.46

Protein Annotations

EMBL:ACUP02012759	EnsemblPlants:KRG92449	EnsemblPlantsGene:GLYMA_20G211700	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23050
PANTHER:PTHR23050:SF336	PFAM:PF13499	PFscan:PS50222	ProteinID:KRG92449	ProteinID:KRG92449.1	ScanProsite:PS00018
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI00023DC3C4	UniProt:I1NIB9	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr20:+:44835802..44837683

Molecular Weight (calculated)

17004.8 Da

IEP (calculated)

3.784

GRAVY (calculated)

-0.470

Length

150 amino acids

Sequence
(BLAST)

001: MADILSEEQI VDFKEAFGLF DKDGDGCITV EELATVIRSL DQNPTEEELQ DMISEVDADG NGTIEFDEFL SLMAKKVKDT DAEEELKEAF KVFDKDQNGY
101: ISASELRHVM INLGEKLTDE EVEQMIKEAD LDGDGQVNYD EFVKMMMTVR

Best Arabidopsis Sequence Match ( AT3G22930.1 )
(BLAST)

001: MEEIQQQQQQ QQQQQQQQQQ QQQQQQELTQ EQIMEFKEAF CLFDKDGDGC ITADELATVI RSLDQNPTEQ ELQDMITEID SDGNGTIEFS EFLNLMANQL
101: QETDADEELK EAFKVFDKDQ NGYISASELR HVMINLGEKL TDEEVDQMIK EADLDGDGQV NYDEFVRMMM ING

Arabidopsis Description

CML11Calmodulin-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.