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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • vacuole 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, vacuole
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:vacuole
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG89746
KRH03909
KRH05621
KRH15420
KRH16591
KRH39527
KRH43214
KRH45468
KRH45469
KRH52586
KRH57193
KRH59375
KRH61351
KRH61926
KRH74431
KRH75634

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G03000.1 KRH52586 AT1G22920.1 21798944
AT3G03000.1 KRH61926 AT1G22920.1 21798944
AT3G03000.1 KRH39527 AT2G22680.1 21798944
AT3G03000.1 KRH45468 AT2G22680.1 21798944
AT3G03000.1 KRH45469 AT2G22680.1 21798944
AT3G03000.1 KRH74431 AT2G22680.1 21798944
AT3G03000.1 KRH75634 AT2G22680.1 21798944
AT3G03000.1 KRH05621 AT3G50060.1 21798944
AT3G03000.1 KRH15420 AT3G50060.1 21798944
AT3G03000.1 KRH61351 AT3G50060.1 21798944
AT3G03000.1 KRH43214 AT5G10110.1 21798944
AT3G03000.1 KRH59375 AT5G10110.1 21798944
AT3G03000.1 KRG89746 AT5G63310.1 21798944
AT3G03000.1 KRH03909 AT5G63310.1 21798944
AT3G03000.1 KRH16591 AT5G63310.1 21798944
AT3G03000.1 KRH57193 AT5G63310.1 21798944
AT3G03000.1 KRH39527 AT5G65683.1 21798944
AT3G03000.1 KRH45468 AT5G65683.1 21798944
AT3G03000.1 KRH45469 AT5G65683.1 21798944
AT3G03000.1 KRH74431 AT5G65683.1 21798944
AT3G03000.1 KRH75634 AT5G65683.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH25249 Soybean cytosol 93.08 90.8
VIT_02s0012g02060.t01 Wine grape cytosol 81.13 79.14
PGSC0003DMT400038352 Potato cytosol 77.99 76.07
Solyc03g097100.1.1 Tomato cytosol 76.1 74.23
AT3G03000.1 Thale cress cytosol 75.47 72.73
Bra021379.1-P Field mustard cytosol 72.96 68.64
CDY58544 Canola cytosol 72.96 68.64
TraesCS1B01G208700.1 Wheat cytosol 71.07 59.16
TraesCS1A01G193700.1 Wheat cytosol 71.07 58.55
TraesCS1D01G197600.1 Wheat cytosol 71.07 58.25
OQU84270 Sorghum cytosol, plastid 76.73 55.71
HORVU1Hr1G080000.3 Barley cytosol 64.15 54.55
Os01t0505600-01 Rice cytosol 72.33 54.5
KRH56721 Soybean cytosol 51.57 50.93
KRH62961 Soybean cytosol 49.06 48.75
KRG94975 Soybean nucleus 42.77 45.64
KRH07628 Soybean cytosol 45.91 45.62
KRH54782 Soybean cytosol 45.28 45.0
KRH31638 Soybean cytosol 41.51 44.0
KRH34350 Soybean cytosol 40.88 43.33
KRH69070 Soybean cytosol 40.88 43.33
KRG92449 Soybean cytosol 40.88 43.33
KRH18664 Soybean cytosol 36.48 41.43
KRG95596 Soybean cytosol 38.36 41.22
KRG96966 Soybean cytosol 38.36 40.94
HORVU1Hr1G050720.2 Barley cytosol 66.67 40.61
KRH67274 Soybean cytosol 37.74 40.54
KRH68729 Soybean cytosol 37.74 40.27
KRG92667 Soybean cytosol 37.11 39.6
KRH34082 Soybean cytosol 36.48 38.93
KRG94637 Soybean cytosol 27.04 37.72
KRH32074 Soybean cytosol 35.22 37.58
KRH71363 Soybean cytosol 34.59 36.91
KRG89812 Soybean cytosol, mitochondrion 35.22 33.94
KRH77406 Soybean cytosol, endoplasmic reticulum, mitochondrion, nucleus 30.19 32.65
KRH28027 Soybean cytosol, endoplasmic reticulum, nucleus 29.56 31.97
KRH04023 Soybean cytosol 27.67 29.93
KRH43884 Soybean cytosol 20.13 24.43
KRH10567 Soybean endoplasmic reticulum 25.79 24.12
KRG98826 Soybean cytosol 20.13 20.38
KRG98823 Soybean cytosol 18.87 19.11
Protein Annotations
Gene3D:1.10.238.10MapMan:35.1EMBL:ACUP02007007InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_dom
EnsemblPlantsGene:GLYMA_11G182700GO:GO:0003674GO:GO:0005488GO:GO:0005509UniProt:I1LKR0InterPro:IPR002048
EnsemblPlants:KRH30413ProteinID:KRH30413ProteinID:KRH30413.1PFAM:PF13499ScanProsite:PS00018PFscan:PS50222
PANTHER:PTHR44256PANTHER:PTHR44256:SF1SMART:SM00054SUPFAM:SSF47473UniParc:UPI000233CCF9SEG:seg
Description
hypothetical protein
Coordinates
chr11:-:25028353..25031056
Molecular Weight (calculated)
17784.1 Da
IEP (calculated)
4.549
GRAVY (calculated)
-0.321
Length
159 amino acids
Sequence
(BLAST)
001: MSKKQMVKLD EEQIAELREI FRSFDRNNDG SLTQLELSSL LRSLGLKPSA EQLEGFIQRA DTNNNGMVEF SEFVALVAPD LLPAKSHYTE DQLRHLFRMF
101: DRDGNGLITA AELAHSMARL GHALTVEELT GMIKEADTDG DGMINFQEFA HAITSAAWP
Best Arabidopsis Sequence Match ( AT1G32250.1 )
(BLAST)
001: MSHKVSKKLD EEQINELREI FRSFDRNKDG SLTQLELGSL LRALGVKPSP DQFETLIDKA DTKSNGLVEF PEFVALVSPE LLSPAKRTTP YTEEQLLRLF
101: RIFDTDGNGF ITAAELAHSM AKLGHALTVA ELTGMIKEAD SDGDGRINFQ EFAKAINSAA FDDIWG
Arabidopsis Description
CML17Probable calcium-binding protein CML17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQN4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.