CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89065
KRG89746
KRG91449
KRH03685
KRH03909
KRH13399
KRH16591
KRH20252
KRH20755
KRH24954
KRH35367
KRH50176
KRH57193
KRH62918
KRH71277

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63310.1	KRG91449	AT2G04630.1	21798944
AT5G63310.1	KRH35367	AT2G04630.1	21798944
AT5G63310.1	KRH50176	AT2G43790.1	12506203
AT5G63310.1	KRH71277	AT2G43790.1	12506203
AT5G63310.1	KRG89065	AT3G45640.1	12506203
AT5G63310.1	KRH24954	AT3G45640.1	12506203
AT5G63310.1	KRH13399	AT5G13810.1	21798944
AT5G63310.1	KRH20755	AT5G13810.1	21798944
AT5G63310.1	KRH62918	AT5G13810.1	21798944
AT5G63310.1	KRH03685	AT5G35410.1	17785451
AT5G63310.1	KRH20252	AT5G35410.1	17785451
AT5G63310.1	KRG89746	AT5G63310.1	17785451
AT5G63310.1	KRH03909	AT5G63310.1	17785451
AT5G63310.1	KRH16591	AT5G63310.1	17785451
AT5G63310.1	KRH57193	AT5G63310.1	17785451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57193	Soybean	plastid	93.85	81.33
KRG89746	Soybean	plastid	91.28	79.46
KRH03909	Soybean	plastid	88.72	76.21
PGSC0003DMT400039453	Potato	cytosol	56.92	68.1
VIT_17s0000g10280.t01	Wine grape	plastid	73.33	62.17
TraesCS5B01G098300.2	Wheat	cytosol	52.31	59.3
PGSC0003DMT400069352	Potato	mitochondrion	67.18	58.48
Solyc06g071960.2.1	Tomato	plastid	66.67	58.04
GSMUA_AchrUn_...	Banana	plastid	67.18	55.98
Solyc03g110960.2.1	Tomato	plastid	66.67	55.79
AT5G63310.1	Thale cress	plastid	65.13	54.98
CDY41513	Canola	plastid	65.13	54.74
CDY48138	Canola	plastid	64.1	54.35
Bra038621.1-P	Field mustard	plastid	64.62	54.31
CDX84395	Canola	plastid	64.1	53.88
KRH66485	Soybean	endoplasmic reticulum	40.51	53.02
KRH48835	Soybean	endoplasmic reticulum, nucleus	40.0	52.35
EES16135	Sorghum	plastid	59.49	52.25
TraesCS5D01G104600.2	Wheat	plastid	58.46	51.82
Os12t0548300-01	Rice	plastid	57.95	51.36
TraesCS5A01G092400.1	Wheat	plastid	57.95	51.13
Zm00001d023833_P001	Maize	plastid	60.51	49.79
HORVU5Hr1G024250.1	Barley	mitochondrion	58.97	46.37
KRH41307	Soybean	mitochondrion	42.05	34.75
KRH60038	Soybean	mitochondrion	41.03	34.04
KRH33600	Soybean	cytosol	12.82	32.05
KRH47632	Soybean	cytosol	18.46	29.75
KRH06204	Soybean	endoplasmic reticulum, extracellular	23.08	21.03

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:6.3.2.4	UniProt:A0A0R0GQL8
EMBL:ACUP02008955	EnsemblPlantsGene:GLYMA_14G164200	GO:GO:0003674	GO:GO:0003824	GO:GO:0004550	GO:GO:0006139
GO:GO:0006165	GO:GO:0006183	GO:GO:0006228	GO:GO:0006241	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	InterPro:IPR036850	EnsemblPlants:KRH16591
ProteinID:KRH16591	ProteinID:KRH16591.1	InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase	PFAM:PF00334
PRINTS:PR01243	PANTHER:PTHR11349	PANTHER:PTHR11349:SF44	MetaCyc:PWY-6545	MetaCyc:PWY-7176	MetaCyc:PWY-7184
MetaCyc:PWY-7187	MetaCyc:PWY-7197	MetaCyc:PWY-7198	MetaCyc:PWY-7205	MetaCyc:PWY-7210	MetaCyc:PWY-7220
MetaCyc:PWY-7221	MetaCyc:PWY-7222	MetaCyc:PWY-7224	MetaCyc:PWY-7226	MetaCyc:PWY-7227	SMART:SM00562
SUPFAM:SSF54919	UniParc:UPI0006ED74CB	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:40445449..40448188

Molecular Weight (calculated)

21899.6 Da

IEP (calculated)

9.915

GRAVY (calculated)

-0.248

Length

195 amino acids

Sequence
(BLAST)

001: VTSFLPRSPK STLPLFRSTH QHLTAFPSQS HLFLYHPPPY ANAKTLRART SFKPAIFLPH LIASLEQVDQ TYIMVKPDGV QRGLVGEIIS RFEKKGFKLT
101: GLKLFECSKE LVEEHYKDLK QKLFFPKLID YITSGPVMCM AWEGVGVVAS ARKLIGATYP LQAEPGTIRG DLAVQTRRNV VHGSDNPENG KHEIE

Best Arabidopsis Sequence Match ( AT5G63310.1 )
(BLAST)

001: MVGATVVSKW TPLCVASPPE RNSASLNPHC SPARVNFRTA LAAFRPQFRL FSRNSASRRR LRASSSAESG IFLPHLVASM EDVEETYIMV KPDGIQRGLV
101: GEIISRFEKK GFKLIGLKMF QCPKELAEEH YKDLSAKSFF PNLIEYITSG PVVCMAWEGV GVVASARKLI GKTDPLQAEP GTIRGDLAVQ TGRNIVHGSD
201: SPENGKREIG LWFKEGELCK WDSALATWLR E

Arabidopsis Description

NDPK2Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:Q0WUG9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.