CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47632	Soybean	cytosol	89.74	57.85
TraesCS7B01G282400.1	Wheat	cytosol	61.54	57.83
HORVU7Hr1G090780.4	Barley	endoplasmic reticulum	58.97	46.0
VIT_09s0002g00950.t01	Wine grape	cytosol	73.08	39.86
KRH06204	Soybean	endoplasmic reticulum, extracellular	87.18	31.78
Solyc12g049370.1.1	Tomato	endoplasmic reticulum	69.23	31.4
PGSC0003DMT400011148	Potato	endoplasmic reticulum	69.23	31.4
GSMUA_Achr3P05930_001	Banana	endoplasmic reticulum	69.23	31.21
CDY66964	Canola	endoplasmic reticulum	65.38	28.98
AT1G17410.1	Thale cress	endoplasmic reticulum	65.38	28.18
CDX96770	Canola	endoplasmic reticulum	62.82	27.68
Zm00001d050827_P003	Maize	endoplasmic reticulum	65.38	27.27
TraesCS7D01G376900.1	Wheat	endoplasmic reticulum	61.54	26.67
Os02t0565100-01	Rice	endoplasmic reticulum	61.54	26.52
TraesCS7A01G380500.1	Wheat	endoplasmic reticulum	60.26	26.11
KXG30465	Sorghum	plastid	67.95	22.27
KRH48835	Soybean	endoplasmic reticulum, nucleus	35.9	18.79
KRH66485	Soybean	endoplasmic reticulum	34.62	18.12
HORVU7Hr1G090750.2	Barley	endoplasmic reticulum, extracellular	29.49	16.31
KRH57193	Soybean	plastid	38.46	13.33
KRH03909	Soybean	plastid	38.46	13.22
KRH16591	Soybean	mitochondrion	32.05	12.82
KRH60038	Soybean	mitochondrion	35.9	11.91
KRH41307	Soybean	mitochondrion	35.9	11.86
KRG89746	Soybean	plastid	33.33	11.61

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:50.2.7	UniProt:A0A0R0HT11
EMBL:ACUP02006538	EnsemblPlantsGene:GLYMA_10G134900	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004550
GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006165	GO:GO:0006183	GO:GO:0006228
GO:GO:0006241	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	InterPro:IPR036850	EnsemblPlants:KRH33600	ProteinID:KRH33600	ProteinID:KRH33600.1
InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase	InterPro:Nucleoside_diP_kinase_AS	PFAM:PF00334	PRINTS:PR01243
ScanProsite:PS00469	PANTHER:PTHR11349	PANTHER:PTHR11349:SF64	MetaCyc:PWY-6545	MetaCyc:PWY-7176	MetaCyc:PWY-7184
MetaCyc:PWY-7187	MetaCyc:PWY-7197	MetaCyc:PWY-7198	MetaCyc:PWY-7205	MetaCyc:PWY-7210	MetaCyc:PWY-7220
MetaCyc:PWY-7221	MetaCyc:PWY-7222	MetaCyc:PWY-7224	MetaCyc:PWY-7226	MetaCyc:PWY-7227	SMART:SM00562
SUPFAM:SSF54919	UniParc:UPI0006EDB854	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:36252449..36252857

Molecular Weight (calculated)

8506.3 Da

IEP (calculated)

8.254

GRAVY (calculated)

-0.171

Length

78 amino acids

Sequence
(BLAST)

1: MIISGPVLVM VLEKDNAIAD WRALMGPTNA SKAKITHPHS IRAKCGLDVE NNCVHGSDSP KSAQREIPFF FKELSASQ

Best Arabidopsis Sequence Match ( AT1G17410.2 )
(BLAST)

001: MIKPDGVSGN YTEEIKTIVV EAGFNIVKEM LTQLDKETAS AFYEEHSSRS FFPHLVTYMT SGPVLVMVLE KRNAVSDWRD LIGPTDAEKA KISHPHSIRA
101: LCGKNSQKNC VHGSDSTSSA EREIKFFFKD VVSGDIATQQ HDEL

Arabidopsis Description

Nucleoside diphosphate kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4I7J3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.