Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 8
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96770 | Canola | endoplasmic reticulum | 94.32 | 93.79 |
| AT1G17410.1 | Thale cress | endoplasmic reticulum | 86.36 | 83.98 |
| TraesCS7B01G282400.1 | Wheat | cytosol | 33.52 | 71.08 |
| VIT_09s0002g00950.t01 | Wine grape | cytosol | 55.68 | 68.53 |
| KRH33600 | Soybean | cytosol | 28.98 | 65.38 |
| KRH47632 | Soybean | cytosol | 42.61 | 61.98 |
| Os02t0565100-01 | Rice | endoplasmic reticulum | 60.23 | 58.56 |
| PGSC0003DMT400011148 | Potato | endoplasmic reticulum | 56.82 | 58.14 |
| GSMUA_Achr3P05930_001 | Banana | endoplasmic reticulum | 56.82 | 57.8 |
| Solyc12g049370.1.1 | Tomato | endoplasmic reticulum | 56.25 | 57.56 |
| HORVU7Hr1G090780.4 | Barley | endoplasmic reticulum | 32.39 | 57.0 |
| TraesCS7A01G380500.1 | Wheat | endoplasmic reticulum | 57.39 | 56.11 |
| TraesCS7D01G376900.1 | Wheat | endoplasmic reticulum | 56.82 | 55.56 |
| Zm00001d050827_P003 | Maize | endoplasmic reticulum | 57.95 | 54.55 |
| HORVU7Hr1G090750.2 | Barley | endoplasmic reticulum, extracellular | 42.05 | 52.48 |
| KRH06204 | Soybean | endoplasmic reticulum, extracellular | 55.68 | 45.79 |
| KXG30465 | Sorghum | plastid | 56.82 | 42.02 |
| CDX93161 | Canola | cytosol | 13.64 | 38.1 |
| CDY71669 | Canola | cytosol, plasma membrane | 28.98 | 34.46 |
| CDY13081 | Canola | cytosol | 28.98 | 34.46 |
| CDY42375 | Canola | cytosol | 28.41 | 33.78 |
| CDY10545 | Canola | cytosol | 28.41 | 33.78 |
| CDY61716 | Canola | cytosol | 24.43 | 30.71 |
| CDY41513 | Canola | plastid | 33.52 | 25.43 |
| CDX84395 | Canola | plastid | 33.52 | 25.43 |
| CDY48138 | Canola | plastid | 32.95 | 25.22 |
| CDX86826 | Canola | mitochondrion | 31.25 | 23.31 |
| CDY25267 | Canola | plastid | 30.68 | 22.98 |
| CDX94238 | Canola | plastid | 30.68 | 22.98 |
| CDY47613 | Canola | mitochondrion | 30.68 | 22.78 |
| CDY03508 | Canola | mitochondrion, plastid | 30.11 | 22.36 |
| CDY40857 | Canola | endoplasmic reticulum, golgi | 17.05 | 8.96 |
Protein Annotations
| KEGG:00230+2.7.4.6 | KEGG:00240+2.7.4.6 | KEGG:00983+2.7.4.6 | Gene3D:3.30.70.141 | MapMan:50.2.7 | GO:A0A078JJN9 |
| UniProt:A0A078JJN9 | EnsemblPlants:CDY66964 | ProteinID:CDY66964 | ProteinID:CDY66964.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004550 | GO:GO:0006139 | GO:GO:0006165 | GO:GO:0006183 | GO:GO:0006228 | GO:GO:0006241 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| EnsemblPlantsGene:GSBRNA2T00057733001 | InterPro:IPR036850 | InterPro:NDK-like_dom | InterPro:NDK-like_dom_sf | InterPro:Nucleoside_diP_kinase | PFAM:PF00334 |
| PRINTS:PR01243 | PANTHER:PTHR11349 | PANTHER:PTHR11349:SF64 | MetaCyc:PWY-6545 | MetaCyc:PWY-7176 | MetaCyc:PWY-7184 |
| MetaCyc:PWY-7187 | MetaCyc:PWY-7197 | MetaCyc:PWY-7198 | MetaCyc:PWY-7205 | MetaCyc:PWY-7210 | MetaCyc:PWY-7220 |
| MetaCyc:PWY-7221 | MetaCyc:PWY-7222 | MetaCyc:PWY-7224 | MetaCyc:PWY-7226 | MetaCyc:PWY-7227 | SMART:SM00562 |
| SUPFAM:SSF54919 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EF32F6 | SEG:seg | : |
Description
BnaC08g48350DBnaC08g48350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJN9]
Coordinates
chrLK035624:-:1847..3220
Molecular Weight (calculated)
19489.4 Da
IEP (calculated)
7.197
GRAVY (calculated)
-0.126
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGFAAHLVL LLVLVSVSLS PWVRCLGKER TLAMIKPDGV SGNYTEEIKR IVVEAGFNIV KERLTQLDKE TASAFYDEHS SRSFFPHLVS YMTSGPVVVM
101: VLEKRDAVSD WRGLIGPTDA QKAKISHPHS IRALCGKDSQ RNCVHGSDST PSAEREIKFF FKDLVSGDIA SQHDEL
101: VLEKRDAVSD WRGLIGPTDA QKAKISHPHS IRALCGKDSQ RNCVHGSDST PSAEREIKFF FKDLVSGDIA SQHDEL
001: MSGITYQILF LLLLASVSLS PVRCLGYGAS SEERTLAMIK PDGVSGNYTE EIKTIVVEAG FNIVKEMLTQ LDKETASAFY EEHSSRSFFP HLVTYMTSGP
101: VLVMVLEKRN AVSDWRDLIG PTDAEKAKIS HPHSIRALCG KNSQKNCVHG SDSTSSAERE IKFFFKDVVS GDIATQQHDE L
101: VLVMVLEKRN AVSDWRDLIG PTDAEKAKIS HPHSIRALCG KNSQKNCVHG SDSTSSAERE IKFFFKDVVS GDIATQQHDE L
Arabidopsis Description
Nucleoside diphosphate kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4I7J3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.