Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93161 | Canola | cytosol | 10.15 | 53.97 |
| CDX94238 | Canola | plastid | 32.24 | 45.96 |
| CDY25267 | Canola | plastid | 31.94 | 45.53 |
| CDX86826 | Canola | mitochondrion | 31.94 | 45.34 |
| TraesCS1D01G452300.1 | Wheat | cytosol | 21.79 | 45.06 |
| AT4G11010.1 | Thale cress | mitochondrion, plastid | 31.64 | 44.54 |
| PGSC0003DMT400014828 | Potato | mitochondrion | 28.66 | 41.38 |
| VIT_02s0025g01500.t01 | Wine grape | plastid | 28.96 | 41.28 |
| CDY03508 | Canola | mitochondrion, plastid | 28.66 | 40.51 |
| KRH60038 | Soybean | mitochondrion | 28.36 | 40.43 |
| Solyc08g082430.2.1 | Tomato | plastid | 28.66 | 40.34 |
| KRH41307 | Soybean | mitochondrion | 28.36 | 40.25 |
| Solyc08g008340.2.1 | Tomato | plastid | 28.06 | 40.17 |
| CDY47613 | Canola | mitochondrion | 28.36 | 40.08 |
| PGSC0003DMT400031997 | Potato | extracellular | 28.36 | 39.92 |
| KXG22725 | Sorghum | mitochondrion | 28.36 | 39.09 |
| Zm00001d009774_P001 | Maize | mitochondrion | 27.46 | 38.66 |
| GSMUA_Achr1P11560_001 | Banana | mitochondrion | 27.16 | 38.4 |
| Zm00001d039221_P001 | Maize | mitochondrion | 27.16 | 38.4 |
| GSMUA_Achr4P01100_001 | Banana | mitochondrion | 27.16 | 38.24 |
| Os05t0595400-01 | Rice | plastid | 27.16 | 38.08 |
| TraesCS1A01G444300.1 | Wheat | mitochondrion, plastid | 27.16 | 37.76 |
| HORVU1Hr1G095400.2 | Barley | plastid | 27.16 | 36.69 |
| TraesCS1B01G478800.1 | Wheat | plastid | 27.16 | 36.69 |
| CDY10545 | Canola | cytosol | 13.13 | 29.73 |
| CDY71669 | Canola | cytosol, plasma membrane | 12.84 | 29.05 |
| CDY42375 | Canola | cytosol | 12.84 | 29.05 |
| CDY13081 | Canola | cytosol | 12.84 | 29.05 |
| Zm00001d004713_P001 | Maize | endoplasmic reticulum | 16.12 | 28.27 |
| CDY61716 | Canola | cytosol | 9.55 | 22.86 |
| CDX84395 | Canola | plastid | 14.93 | 21.55 |
| CDY41513 | Canola | plastid | 14.63 | 21.12 |
| Zm00001d024444_P001 | Maize | plastid | 18.21 | 21.11 |
| CDY48138 | Canola | plastid | 12.54 | 18.26 |
| CDX96770 | Canola | endoplasmic reticulum | 9.25 | 17.51 |
| CDY66964 | Canola | endoplasmic reticulum | 8.96 | 17.05 |
| Solyc06g075470.1.1 | Tomato | cytosol | 0.9 | 3.8 |
Protein Annotations
| KEGG:00230+2.7.4.6 | KEGG:00240+2.7.4.6 | KEGG:00983+2.7.4.6 | Gene3D:3.30.70.141 | MapMan:50.2.7 | GO:A0A078HSN3 |
| UniProt:A0A078HSN3 | EnsemblPlants:CDY40857 | ProteinID:CDY40857 | ProteinID:CDY40857.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004550 | GO:GO:0005575 | GO:GO:0006139 | GO:GO:0006165 | GO:GO:0006183 | GO:GO:0006228 |
| GO:GO:0006241 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00071858001 | InterPro:IPR036850 | InterPro:NDK-like_dom |
| InterPro:NDK-like_dom_sf | InterPro:Nucleoside_diP_kinase | PFAM:PF00334 | PRINTS:PR01243 | PANTHER:PTHR11349 | PANTHER:PTHR11349:SF91 |
| MetaCyc:PWY-6545 | MetaCyc:PWY-7176 | MetaCyc:PWY-7184 | MetaCyc:PWY-7187 | MetaCyc:PWY-7197 | MetaCyc:PWY-7198 |
| MetaCyc:PWY-7205 | MetaCyc:PWY-7210 | MetaCyc:PWY-7220 | MetaCyc:PWY-7221 | MetaCyc:PWY-7222 | MetaCyc:PWY-7224 |
| MetaCyc:PWY-7226 | MetaCyc:PWY-7227 | SMART:SM00562 | SUPFAM:SSF54919 | TMHMM:TMhelix | UniParc:UPI0004EDCB71 |
Description
BnaC09g26080DBnaC09g26080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSN3]
Coordinates
chrLK032482:+:159267..161891
Molecular Weight (calculated)
37568.1 Da
IEP (calculated)
10.743
GRAVY (calculated)
-0.025
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MCRCKAIAVT LVFKLARCLV LVIVEFSASA SFRGINGLET RTLTISPESN CTFIAFSIGF LRSMTVKTFA TSRIVLLAVL GCMYFGCPTR HAMRSRPSSL
101: KNRSGTFLSS NQIGADDSSG FVGMTPGSHL STNIRKLREE LHGRRSEMRM SRQGRIYEVL NLHQSMFLKD FFFSIRKGGP TSRVTPKNDG ERYLLPKQQG
201: LFFPQLRTLV SSPQQRSLHL QRSLSMHLTL QDRWITGLLA LPAAAYMVQD QEVLAAEMER TFIAIKPDGG LISEIISRFE RKGFKLVGIK VVVPSKDFAQ
301: KHYHDLKERP FFNGLCDFLS SGPVIAMVTR DTLSP
101: KNRSGTFLSS NQIGADDSSG FVGMTPGSHL STNIRKLREE LHGRRSEMRM SRQGRIYEVL NLHQSMFLKD FFFSIRKGGP TSRVTPKNDG ERYLLPKQQG
201: LFFPQLRTLV SSPQQRSLHL QRSLSMHLTL QDRWITGLLA LPAAAYMVQD QEVLAAEMER TFIAIKPDGG LISEIISRFE RKGFKLVGIK VVVPSKDFAQ
301: KHYHDLKERP FFNGLCDFLS SGPVIAMVTR DTLSP
001: MSSQICRSAS KAAKSLLSSA KNARFFSEGR AIGAAAAVSA SGKIPLYASN FARSSGSGVA SKSWITGLLA LPAAAYMIQD QEVLAAEMER TFIAIKPDGV
101: QRGLISEIIS RFERKGFKLV GIKVIVPSKD FAQKHYHDLK ERPFFNGLCD FLSSGPVIAM VWEGDGVIRY GRKLIGATDP QKSEPGTIRG DLAVTVGRNI
201: IHGSDGPETA KDEISLWFKP QELVSYTSNS EKWLYGDN
101: QRGLISEIIS RFERKGFKLV GIKVIVPSKD FAQKHYHDLK ERPFFNGLCD FLSSGPVIAM VWEGDGVIRY GRKLIGATDP QKSEPGTIRG DLAVTVGRNI
201: IHGSDGPETA KDEISLWFKP QELVSYTSNS EKWLYGDN
Arabidopsis Description
NDPK3Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UTZ0]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.