CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 26746009

msms PMID: 26746009 doi

S Chen, Y Luo, G Ding, F Xu

National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China. Electronic address: fangsenxu@mail.hzau.edu.cn., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Agricultural Biotechnology of Liaoning Province, College of Biological Science and Technology, Shenyang Agricultural University, Shenyang 110866, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13081	Canola	cytosol	99.32	99.32
CDY42375	Canola	cytosol	96.62	96.62
CDY10545	Canola	cytosol	95.95	95.95
CDY61716	Canola	cytosol	89.19	94.29
CDX93161	Canola	cytosol	39.19	92.06
KRH48835	Soybean	endoplasmic reticulum, nucleus	89.86	89.26
AT4G09320.1	Thale cress	cytosol, mitochondrion, nucleus	89.86	89.26
KRH66485	Soybean	endoplasmic reticulum	88.51	87.92
Solyc01g089970.2.1	Tomato	extracellular, plastid	85.14	85.14
PGSC0003DMT400080042	Potato	cytosol	85.14	85.14
VIT_15s0021g01330.t01	Wine grape	cytosol, extracellular	83.11	83.11
Zm00001d029968_P001	Maize	plastid	82.43	81.88
EER91919	Sorghum	cytosol	82.43	81.88
GSMUA_Achr5P18300_001	Banana	cytosol, unclear	81.08	81.08
GSMUA_Achr8P15010_001	Banana	cytosol	80.41	80.41
GSMUA_Achr11P...	Banana	cytosol	77.03	80.28
TraesCS1B01G230300.1	Wheat	cytosol, plastid	79.05	78.0
TraesCS1A01G217200.1	Wheat	golgi	79.05	78.0
TraesCS1D01G219000.1	Wheat	plastid	79.05	77.48
HORVU1Hr1G055440.1	Barley	cytosol, plasma membrane	77.7	76.67
Os10t0563700-01	Rice	extracellular	75.68	74.17
EER99399	Sorghum	cytosol	72.3	71.33
Solyc09g055420.1.1	Tomato	cytosol, unclear	56.08	70.94
Zm00001d021526_P001	Maize	cytosol, extracellular	72.97	70.59
Os07t0492000-01	Rice	extracellular	69.59	69.13
TraesCS4A01G213400.2	Wheat	unclear	72.3	55.44
TraesCS4B01G102400.2	Wheat	cytosol	71.62	54.92
TraesCS4D01G099200.2	Wheat	cytosol	70.95	54.4
KXG23408	Sorghum	plastid	27.03	50.63
CDX84395	Canola	plastid	59.46	37.93
CDY41513	Canola	plastid	59.46	37.93
CDY48138	Canola	plastid	58.78	37.83
CDX94238	Canola	plastid	57.43	36.17
CDY25267	Canola	plastid	57.43	36.17
CDX86826	Canola	mitochondrion	56.76	35.59
CDY03508	Canola	mitochondrion, plastid	56.76	35.44
CDY47613	Canola	mitochondrion	56.76	35.44
CDY66964	Canola	endoplasmic reticulum	34.46	28.98
CDX96770	Canola	endoplasmic reticulum	34.46	28.81
CDY40857	Canola	endoplasmic reticulum, golgi	29.05	12.84

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:6.3.2.4	GO:A0A078JYA4
UniProt:A0A078JYA4	EnsemblPlants:CDY71669	ProteinID:CDY71669	ProteinID:CDY71669.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004550	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006165
GO:GO:0006183	GO:GO:0006228	GO:GO:0006241	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00017933001	InterPro:IPR036850
HAMAP:MF_00451	InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase	InterPro:Nucleoside_diP_kinase_AS	PFAM:PF00334
PRINTS:PR01243	ScanProsite:PS00469	PANTHER:PTHR11349	PANTHER:PTHR11349:SF66	MetaCyc:PWY-6545	MetaCyc:PWY-7176
MetaCyc:PWY-7184	MetaCyc:PWY-7187	MetaCyc:PWY-7197	MetaCyc:PWY-7198	MetaCyc:PWY-7205	MetaCyc:PWY-7210
MetaCyc:PWY-7220	MetaCyc:PWY-7221	MetaCyc:PWY-7222	MetaCyc:PWY-7224	MetaCyc:PWY-7226	MetaCyc:PWY-7227
SMART:SM00562	SUPFAM:SSF54919	UniParc:UPI0001CAA046	:	:	:

Description

BnaCnng73880DNucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A078JYA4]

Coordinates

chrLK046862:-:787..1900

Molecular Weight (calculated)

16380.7 Da

IEP (calculated)

6.796

GRAVY (calculated)

-0.061

Length

148 amino acids

Sequence
(BLAST)

001: MEQTFIMIKP DGVQRGLVGE IICRFEKKGF TLKGLKLITV DRPFAEKHYQ DLSAKPFFSS LVDYIISGPV VAMIWEGKNV VLTGRKIIGA TNPAASEPGT
101: IRGDFAIDIG RNVIHGSDSV ESANKEAALW FPDGPVNWQS SLHSWIYE

Best Arabidopsis Sequence Match ( AT4G09320.1 )
(BLAST)

001: MEQTFIMIKP DGVQRGLIGE VICRFEKKGF TLKGLKLISV ERSFAEKHYE DLSSKSFFSG LVDYIVSGPV VAMIWEGKNV VLTGRKIIGA TNPAASEPGT
101: IRGDFAIDIG RNVIHGSDSV ESARKEIALW FPDGPVNWQS SVHPWVYET

Arabidopsis Description

NDK1Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UXQ6]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.