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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 5
  • mitochondrion 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol, mitochondrion, nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021526_P001 Maize cytosol, extracellular 97.33 95.42
Os07t0492000-01 Rice extracellular 94.0 94.63
GSMUA_Achr8P15010_001 Banana cytosol 81.33 82.43
GSMUA_Achr5P18300_001 Banana cytosol, unclear 80.0 81.08
GSMUA_Achr11P... Banana cytosol 75.33 79.58
EER91919 Sorghum cytosol 77.33 77.85
Solyc01g089970.2.1 Tomato extracellular, plastid 76.0 77.03
PGSC0003DMT400080042 Potato cytosol 75.33 76.35
KRH48835 Soybean endoplasmic reticulum, nucleus 75.33 75.84
KRH66485 Soybean endoplasmic reticulum 74.0 74.5
VIT_15s0021g01330.t01 Wine grape cytosol, extracellular 73.33 74.32
CDY13081 Canola cytosol 72.0 72.97
Bra027579.1-P Field mustard cytosol 72.0 72.97
AT4G09320.1 Thale cress cytosol, mitochondrion, nucleus 72.0 72.48
CDY71669 Canola cytosol, plasma membrane 71.33 72.3
CDY10545 Canola cytosol 71.33 72.3
CDY42375 Canola cytosol 70.67 71.62
Bra030844.1-P Field mustard cytosol 70.67 71.62
TraesCS4B01G102400.2 Wheat cytosol 90.67 70.47
TraesCS4D01G099200.2 Wheat cytosol 90.0 69.95
TraesCS4A01G213400.2 Wheat unclear 90.0 69.95
Solyc09g055420.1.1 Tomato cytosol, unclear 53.33 68.38
CDX93161 Canola cytosol 28.67 68.25
CDY61716 Canola cytosol 62.0 66.43
Bra013108.1-P Field mustard cytosol 36.67 65.48
KXG23408 Sorghum plastid 25.33 48.1
VIT_19s0085g00080.t01 Wine grape cytosol, mitochondrion 31.33 44.76
EES16135 Sorghum plastid 64.67 43.69
KXG22725 Sorghum mitochondrion 56.0 34.57
KXG30465 Sorghum plastid 34.67 21.85
Protein Annotations
KEGG:00230+2.7.4.6KEGG:00240+2.7.4.6KEGG:00983+2.7.4.6Gene3D:3.30.70.141MapMan:6.3.2.4EntrezGene:8080696
UniProt:C5X972EnsemblPlants:EER99399ProteinID:EER99399ProteinID:EER99399.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004550GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0006139GO:GO:0006165GO:GO:0006183GO:GO:0006228GO:GO:0006241
GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0070301InterPro:IPR036850HAMAP:MF_00451InterPro:NDK-like_dom
InterPro:NDK-like_dom_sfInterPro:Nucleoside_diP_kinaseInterPro:Nucleoside_diP_kinase_ASPFAM:PF00334PRINTS:PR01243ScanProsite:PS00469
PANTHER:PTHR11349PANTHER:PTHR11349:SF66MetaCyc:PWY-6545MetaCyc:PWY-7176MetaCyc:PWY-7184MetaCyc:PWY-7187
MetaCyc:PWY-7197MetaCyc:PWY-7198MetaCyc:PWY-7205MetaCyc:PWY-7210MetaCyc:PWY-7220MetaCyc:PWY-7221
MetaCyc:PWY-7222MetaCyc:PWY-7224MetaCyc:PWY-7226MetaCyc:PWY-7227SMART:SM00562EnsemblPlantsGene:SORBI_3002G306900
SUPFAM:SSF54919unigene:Sbi.14615UniParc:UPI0001A83FE5RefSeq:XP_002462878.1::
Description
hypothetical protein
Coordinates
chr2:-:68148318..68150557
Molecular Weight (calculated)
16919.4 Da
IEP (calculated)
6.810
GRAVY (calculated)
-0.193
Length
150 amino acids
Sequence
(BLAST)
001: MAEQTFIMIK PDGVQRGLIG DIISRFEKKG FYLKGMKFMN VERSFAQQHY ADLSDKPFFP GLVEYIISGP VVAMVWEGKD VVLTGRRIIG ATRPWEAAPG
101: TIRGDYAVEV GRNVIHGSDS VENGKKEIAL WFPEGVAEWK SNLHPWIYES
Best Arabidopsis Sequence Match ( AT4G09320.1 )
(BLAST)
001: MEQTFIMIKP DGVQRGLIGE VICRFEKKGF TLKGLKLISV ERSFAEKHYE DLSSKSFFSG LVDYIVSGPV VAMIWEGKNV VLTGRKIIGA TNPAASEPGT
101: IRGDFAIDIG RNVIHGSDSV ESARKEIALW FPDGPVNWQS SVHPWVYET
Arabidopsis Description
NDK1Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UXQ6]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.