CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050827_P003	Maize	endoplasmic reticulum	68.07	86.63
TraesCS7B01G282400.1	Wheat	cytosol	28.15	80.72
Os02t0565100-01	Rice	endoplasmic reticulum	59.24	77.9
TraesCS7A01G380500.1	Wheat	endoplasmic reticulum	56.72	75.0
TraesCS7D01G376900.1	Wheat	endoplasmic reticulum	56.3	74.44
HORVU7Hr1G090780.4	Barley	endoplasmic reticulum	29.83	71.0
HORVU7Hr1G090750.2	Barley	endoplasmic reticulum, extracellular	42.02	70.92
VIT_09s0002g00950.t01	Wine grape	cytosol	42.44	70.63
KRH33600	Soybean	cytosol	22.27	67.95
GSMUA_Achr3P05930_001	Banana	endoplasmic reticulum	46.64	64.16
KRH47632	Soybean	cytosol	32.35	63.64
PGSC0003DMT400011148	Potato	endoplasmic reticulum	41.18	56.98
Solyc12g049370.1.1	Tomato	endoplasmic reticulum	41.18	56.98
AT1G17410.1	Thale cress	endoplasmic reticulum	43.28	56.91
CDY66964	Canola	endoplasmic reticulum	42.02	56.82
CDX96770	Canola	endoplasmic reticulum	41.6	55.93
KRH06204	Soybean	endoplasmic reticulum, extracellular	42.02	46.73
EER91919	Sorghum	cytosol	22.27	35.57
EER99399	Sorghum	cytosol	21.85	34.67
KXG23408	Sorghum	plastid	10.5	31.65
EES16135	Sorghum	plastid	22.27	23.87
KXG22725	Sorghum	mitochondrion	22.69	22.22

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:50.2.7	UniProt:A0A194YRK7
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004550	GO:GO:0005488	GO:GO:0005524
GO:GO:0006139	GO:GO:0006165	GO:GO:0006183	GO:GO:0006228	GO:GO:0006241	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
InterPro:IPR036850	EnsemblPlants:KXG30465	ProteinID:KXG30465	ProteinID:KXG30465.1	InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf
InterPro:Nucleoside_diP_kinase	InterPro:Nucleoside_diP_kinase_AS	ProteinID:OQU85167.1	PFAM:PF00334	PRINTS:PR01243	ScanProsite:PS00469
PANTHER:PTHR11349	PANTHER:PTHR11349:SF64	MetaCyc:PWY-6545	MetaCyc:PWY-7176	MetaCyc:PWY-7184	MetaCyc:PWY-7187
MetaCyc:PWY-7197	MetaCyc:PWY-7198	MetaCyc:PWY-7205	MetaCyc:PWY-7210	MetaCyc:PWY-7220	MetaCyc:PWY-7221
MetaCyc:PWY-7222	MetaCyc:PWY-7224	MetaCyc:PWY-7226	MetaCyc:PWY-7227	SMART:SM00562	EnsemblPlantsGene:SORBI_3004G184500
SUPFAM:SSF54919	UniParc:UPI0007F1BDBF	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:53764473..53768506

Molecular Weight (calculated)

25629.6 Da

IEP (calculated)

8.003

GRAVY (calculated)

-0.203

Length

238 amino acids

Sequence
(BLAST)

001: MGQAGQHRER RASTAGENGT SSACWSCVGW LSKASRPGKR TAGSLPPPFP APPRMAGATT SAPGALVRVC LPPLLLLFLF YGCCRCGAVE AERTLAMIKP
101: DGLSGKYTEK IKAAILDSGF HIVKETKVQL DAERASLFYA EHSQRSFFDS LVKYITSGPV LAMVLERPDA IAQWRALIGP TDARKAKTSH PNSIRAMCGL
201: DSEKNCVHGS DSPESAAREI SFFFGEEADS VTVEHDEL

Best Arabidopsis Sequence Match ( AT1G17410.1 )
(BLAST)

001: MSGITYQILF LLLLASVSLS PVRCLGYGAS SEERTLAMIK PDGVSGNYTE EIKTIVVEAG FNIVKEMLTQ LDKETASAFY EEHSSRSFFP HLVTYMTSGP
101: VLVMVLEKRN AVSDWRDLIG PTDAEKAKIS HPHSIRALCG KNSQKNCVHG SDSTSSAERE IKFFFKDVVS GDIATQQHDE L

Arabidopsis Description

Nucleoside diphosphate kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4I7J3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.