Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH33600 | Soybean | cytosol | 39.86 | 73.08 |
| TraesCS7B01G282400.1 | Wheat | cytosol | 41.26 | 71.08 |
| KRH47632 | Soybean | cytosol | 58.74 | 69.42 |
| Solyc12g049370.1.1 | Tomato | endoplasmic reticulum | 71.33 | 59.3 |
| PGSC0003DMT400011148 | Potato | endoplasmic reticulum | 71.33 | 59.3 |
| GSMUA_Achr3P05930_001 | Banana | endoplasmic reticulum | 67.83 | 56.07 |
| HORVU7Hr1G090780.4 | Barley | endoplasmic reticulum | 39.16 | 56.0 |
| CDY66964 | Canola | endoplasmic reticulum | 68.53 | 55.68 |
| AT1G17410.1 | Thale cress | endoplasmic reticulum | 69.93 | 55.25 |
| Os02t0565100-01 | Rice | endoplasmic reticulum | 69.23 | 54.7 |
| CDX96770 | Canola | endoplasmic reticulum | 67.13 | 54.24 |
| TraesCS7A01G380500.1 | Wheat | endoplasmic reticulum | 67.83 | 53.89 |
| TraesCS7D01G376900.1 | Wheat | endoplasmic reticulum | 67.83 | 53.89 |
| Zm00001d050827_P003 | Maize | endoplasmic reticulum | 69.93 | 53.48 |
| KRH06204 | Soybean | endoplasmic reticulum, extracellular | 70.63 | 47.2 |
| HORVU7Hr1G090750.2 | Barley | endoplasmic reticulum, extracellular | 46.15 | 46.81 |
| KXG30465 | Sorghum | plastid | 70.63 | 42.44 |
| VIT_15s0021g01330.t01 | Wine grape | cytosol, extracellular | 34.97 | 33.78 |
| VIT_17s0000g10280.t01 | Wine grape | plastid | 37.06 | 23.04 |
| VIT_19s0085g00080.t01 | Wine grape | cytosol, mitochondrion | 15.38 | 20.95 |
| VIT_02s0025g01500.t01 | Wine grape | plastid | 33.57 | 20.43 |
Protein Annotations
| KEGG:00230+2.7.4.6 | KEGG:00240+2.7.4.6 | KEGG:00983+2.7.4.6 | EntrezGene:100244666 | wikigene:100244666 | Gene3D:3.30.70.141 |
| MapMan:50.2.7 | EMBL:AM482397 | ProteinID:CAN77593 | ProteinID:CAN77593.1 | ProteinID:CBI35849 | ProteinID:CBI35849.3 |
| UniProt:D7TZQ3 | EMBL:FN596494 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004550 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006139 |
| GO:GO:0006165 | GO:GO:0006183 | GO:GO:0006228 | GO:GO:0006241 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | InterPro:IPR036850 |
| EntrezGene:LOC100244666 | wikigene:LOC100244666 | InterPro:NDK-like_dom | InterPro:NDK-like_dom_sf | InterPro:Nucleoside_diP_kinase | InterPro:Nucleoside_diP_kinase_AS |
| PFAM:PF00334 | PRINTS:PR01243 | ScanProsite:PS00469 | PANTHER:PTHR11349 | PANTHER:PTHR11349:SF64 | SMART:SM00562 |
| SUPFAM:SSF54919 | UniParc:UPI0001BE4A22 | ArrayExpress:VIT_09s0002g00950 | EnsemblPlantsGene:VIT_09s0002g00950 | EnsemblPlants:VIT_09s0002g00950.t01 | RefSeq:XP_002272468 |
| RefSeq:XP_002272468.2 | SEG:seg | : | : | : | : |
Description
Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:D7TZQ3]
Coordinates
chr9:-:692174..695005
Molecular Weight (calculated)
15796.7 Da
IEP (calculated)
5.229
GRAVY (calculated)
-0.248
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MIKPDGLSGN YTDEIKNAIL ESGFIILREM TVRLDEDTAG KFYAEHSSRS FFPALVKYMT SGPVLVMVLE KVNAVADWRA LIGPTDAQKA KVTHPHSIRA
101: MCGQDLEKNC VHGSDSPQSA EREISFFFEE FSSGAVGSKH DEL
101: MCGQDLEKNC VHGSDSPQSA EREISFFFEE FSSGAVGSKH DEL
001: MSGITYQILF LLLLASVSLS PVRCLGYGAS SEERTLAMIK PDGVSGNYTE EIKTIVVEAG FNIVKEMLTQ LDKETASAFY EEHSSRSFFP HLVTYMTSGP
101: VLVMVLEKRN AVSDWRDLIG PTDAEKAKIS HPHSIRALCG KNSQKNCVHG SDSTSSAERE IKFFFKDVVS GDIATQQHDE L
101: VLVMVLEKRN AVSDWRDLIG PTDAEKAKIS HPHSIRALCG KNSQKNCVHG SDSTSSAERE IKFFFKDVVS GDIATQQHDE L
Arabidopsis Description
Nucleoside diphosphate kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4I7J3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.