Factsheet for VIT_02s0025g01500.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g075470.1.1	Tomato	cytosol	32.34	96.2
TraesCS1D01G452300.1	Wheat	cytosol	60.85	88.27
Solyc08g008340.2.1	Tomato	plastid	82.13	82.48
PGSC0003DMT400014828	Potato	mitochondrion	81.28	82.33
Solyc08g082430.2.1	Tomato	plastid	82.13	81.09
PGSC0003DMT400031997	Potato	extracellular	82.13	81.09
Bra033163.1-P	Field mustard	plastid	79.15	79.15
CDY25267	Canola	plastid	79.15	79.15
CDX94238	Canola	plastid	78.72	78.72
Bra035260.1-P	Field mustard	mitochondrion	78.3	77.97
CDX86826	Canola	mitochondrion	78.3	77.97
AT4G23900.1	Thale cress	mitochondrion	78.3	77.64
AT4G11010.1	Thale cress	mitochondrion, plastid	78.3	77.31
KRH60038	Soybean	mitochondrion	76.6	76.6
GSMUA_Achr4P01100_001	Banana	mitochondrion	77.45	76.47
Bra013742.1-P	Field mustard	mitochondrion	76.6	75.95
CDY47613	Canola	mitochondrion	76.6	75.95
KRH41307	Soybean	mitochondrion	75.74	75.42
CDY03508	Canola	mitochondrion, plastid	75.74	75.11
GSMUA_Achr1P11560_001	Banana	mitochondrion	75.32	74.68
Os05t0595400-01	Rice	plastid	74.89	73.64
Zm00001d039221_P001	Maize	mitochondrion	71.91	71.31
Zm00001d009774_P001	Maize	mitochondrion	71.91	71.01
KXG22725	Sorghum	mitochondrion	72.77	70.37
TraesCS1A01G444300.1	Wheat	mitochondrion, plastid	70.64	68.88
TraesCS1B01G478800.1	Wheat	plastid	71.49	67.74
HORVU1Hr1G095400.2	Barley	plastid	71.06	67.34
Zm00001d004713_P001	Maize	endoplasmic reticulum	53.19	65.44
VIT_15s0021g01330.t01	Wine grape	cytosol, extracellular	36.6	58.11
Zm00001d024444_P001	Maize	plastid	56.6	46.02
VIT_17s0000g10280.t01	Wine grape	plastid	38.3	39.13
AT4G23895.3	Thale cress	cytosol	77.45	38.97
VIT_19s0085g00080.t01	Wine grape	cytosol, mitochondrion	15.32	34.29
VIT_09s0002g00950.t01	Wine grape	cytosol	20.43	33.57
CDY40857	Canola	endoplasmic reticulum, golgi	41.28	28.96

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	EntrezGene:100263310	wikigene:100263310	Gene3D:3.30.70.141
MapMan:6.3.2.4	UniProt:A5BVN4	EMBL:AM472862	ProteinID:CAN83625	ProteinID:CAN83625.1	ProteinID:CBI34488
ProteinID:CBI34488.3	EMBL:FN596251	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004550
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139
GO:GO:0006165	GO:GO:0006183	GO:GO:0006228	GO:GO:0006241	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR036850
EntrezGene:LOC100263310	wikigene:LOC100263310	HAMAP:MF_00451	InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase
InterPro:Nucleoside_diP_kinase_AS	PFAM:PF00334	PRINTS:PR01243	ScanProsite:PS00469	PANTHER:PTHR11349	PANTHER:PTHR11349:SF91
SMART:SM00562	SUPFAM:SSF54919	TIGR:TC53710	UniParc:UPI00015247E3	ArrayExpress:VIT_02s0025g01500	EnsemblPlantsGene:VIT_02s0025g01500
EnsemblPlants:VIT_02s0025g01500.t01	unigene:Vvi.5246	RefSeq:XP_002269576	RefSeq:XP_002269576.2	SEG:seg	:

Description

Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A5BVN4]

Coordinates

chr2:+:1453930..1457883

Molecular Weight (calculated)

25563.7 Da

IEP (calculated)

9.578

GRAVY (calculated)

-0.144

Length

235 amino acids

Sequence
(BLAST)

001: MSSQICRSAS RAARSLLSAS KSSNLLAEGR AVAAVAALSS RGKPFLSSFG NAGSGNAYRG WLSSVLALPA AAYMMQEQEL HATEMERTFI AIKPDGVQRG
101: LIAEILSRFE RKGFKLVAIK IVVPSKDFAQ KHYHDLKERP FFNGLCDFLS SGPVVAMVWE GEGVIKYGRK LIGATDPQKS EPGTIRGDLA VVVGRNIIHG
201: SDGPETAKDE INLWFKPEEL VNYSSNAEKW IYGVN

Best Arabidopsis Sequence Match ( AT4G23900.1 )
(BLAST)

001: MSSQICRSAS RAARSLLSSA KNARFFSEGR AIGAASVVHA TGKVPQYASN FGKSGSGFVS NSWITGLLAL PAAAFMLQDQ EALAAEMERT FIAIKPDGVQ
101: RGLISEIITR FERKGYKLVG IKVMVPSKGF AQKHYHDLKE RPFFNGLCNF LSSGPVVAMV WEGEGVIRYG RKLIGATDPQ KSEPGTIRGD LAVVVGRNII
201: HGSDGPETAK DEISLWFKPE ELVSYTSNAE KWIYGQN

Arabidopsis Description

NDK4Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LAH8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.